RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
TRA2B-213ENST00000485530 PARD3Q8TEW0 1356 aa16.86■□□□□ 0.29
TRA2B-213ENST00000485530 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
TRA2B-213ENST00000485530 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
TRA2B-213ENST00000485530 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
TRA2B-213ENST00000485530 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
TRA2B-213ENST00000485530 FBLN1P23142 703 aa16.84■□□□□ 0.29
TRA2B-213ENST00000485530 NLRP13Q86W25 1043 aa16.84■□□□□ 0.29
TRA2B-213ENST00000485530 GGNBP2Q9H3C7 697 aa16.84■□□□□ 0.29
TRA2B-213ENST00000485530 USP31Q70CQ4 1352 aa16.84■□□□□ 0.29
TRA2B-213ENST00000485530 USP19O94966 1318 aa16.83■□□□□ 0.28
TRA2B-213ENST00000485530 TRIM37O94972 964 aa16.83■□□□□ 0.28
TRA2B-213ENST00000485530 PIK3C2AO00443 1686 aa16.82■□□□□ 0.28
TRA2B-213ENST00000485530 GCP02774 474 aa16.82■□□□□ 0.28
TRA2B-213ENST00000485530 AMER1Q5JTC6 1135 aaPredicted RBP16.82■□□□□ 0.28
TRA2B-213ENST00000485530 SPATA31A1Q5TZJ5 1347 aa16.81■□□□□ 0.28
TRA2B-213ENST00000485530 FAM196AQ6ZSG2 479 aa16.81■□□□□ 0.28
TRA2B-213ENST00000485530 APBA3O96018 575 aa16.8■□□□□ 0.28
TRA2B-213ENST00000485530 PRDM11Q9NQV5 511 aa16.8■□□□□ 0.28
TRA2B-213ENST00000485530 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
TRA2B-213ENST00000485530 PHRF1Q9P1Y6 1649 aaKnown RBP16.8■□□□□ 0.28
TRA2B-213ENST00000485530 ZC3H6P61129 1189 aaKnown RBP16.79■□□□□ 0.28
TRA2B-213ENST00000485530 CGNL1Q0VF96 1302 aa16.78■□□□□ 0.28
TRA2B-213ENST00000485530 SOX12O15370 315 aa16.78■□□□□ 0.28
TRA2B-213ENST00000485530 OVOS2A0A0J9YW53 1432 aa16.78■□□□□ 0.28
TRA2B-213ENST00000485530 OVOS2Q6IE36 1432 aa16.78■□□□□ 0.28
TRA2B-213ENST00000485530 KIAA0232Q92628 1395 aa16.77■□□□□ 0.28
TRA2B-213ENST00000485530 COG3Q96JB2 828 aa16.77■□□□□ 0.28
TRA2B-213ENST00000485530 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
TRA2B-213ENST00000485530 CHRNA2Q15822 529 aa16.75■□□□□ 0.27
TRA2B-213ENST00000485530 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
TRA2B-213ENST00000485530 ARHGEF25Q86VW2 580 aa16.75■□□□□ 0.27
TRA2B-213ENST00000485530 SLIT3O75094 1523 aa16.75■□□□□ 0.27
TRA2B-213ENST00000485530 CNGB1Q14028 1251 aaPredicted RBP16.74■□□□□ 0.27
TRA2B-213ENST00000485530 STRN4Q9NRL3 753 aa16.74■□□□□ 0.27
TRA2B-213ENST00000485530 NBPF14Q5TI25 921 aa16.73■□□□□ 0.27
TRA2B-213ENST00000485530 KCNH5Q8NCM2 988 aa16.73■□□□□ 0.27
TRA2B-213ENST00000485530 SPON1Q9HCB6 807 aa16.73■□□□□ 0.27
TRA2B-213ENST00000485530 PPP1R1BQ9UD71 204 aaPredicted RBP16.73■□□□□ 0.27
TRA2B-213ENST00000485530 AXIN2Q9Y2T1 843 aa16.73■□□□□ 0.27
TRA2B-213ENST00000485530 TNNT2P45379 298 aaPredicted RBP16.72■□□□□ 0.27
TRA2B-213ENST00000485530 BARGINQ6ZT62 677 aa16.72■□□□□ 0.27
TRA2B-213ENST00000485530 NFAT5O94916 1531 aa16.71■□□□□ 0.27
TRA2B-213ENST00000485530 KCNQ2O43526 872 aa16.71■□□□□ 0.27
TRA2B-213ENST00000485530 RRS1Q15050 365 aaKnown RBP16.71■□□□□ 0.27
TRA2B-213ENST00000485530 MORC1Q86VD1 984 aa16.71■□□□□ 0.27
TRA2B-213ENST00000485530 USP35Q9P2H5 1018 aa16.71■□□□□ 0.27
TRA2B-213ENST00000485530 CPDO75976 1380 aa16.71■□□□□ 0.27
TRA2B-213ENST00000485530 NPC1L1Q9UHC9 1359 aa16.71■□□□□ 0.27
TRA2B-213ENST00000485530 USP54Q70EL1 1684 aa16.71■□□□□ 0.27
TRA2B-213ENST00000485530 LMO7Q8WWI1 1683 aa16.71■□□□□ 0.27
TRA2B-213ENST00000485530 RGPD3A6NKT7 1758 aaPredicted RBP16.7■□□□□ 0.26
TRA2B-213ENST00000485530 RGPD4Q7Z3J3 1758 aa16.7■□□□□ 0.26
TRA2B-213ENST00000485530 CASZ1Q86V15 1759 aa16.7■□□□□ 0.26
TRA2B-213ENST00000485530 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
TRA2B-213ENST00000485530 MAP3K19Q56UN5 1328 aa16.7■□□□□ 0.26
TRA2B-213ENST00000485530 ZBTB7CA1YPR0 619 aa16.69■□□□□ 0.26
TRA2B-213ENST00000485530 POLKQ9UBT6 870 aa16.69■□□□□ 0.26
TRA2B-213ENST00000485530 PARP4Q9UKK3 1724 aaKnown RBP16.69■□□□□ 0.26
TRA2B-213ENST00000485530 UTRNP46939 3433 aa16.68■□□□□ 0.26
TRA2B-213ENST00000485530 NSD2O96028 1365 aa16.68■□□□□ 0.26
TRA2B-213ENST00000485530 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
TRA2B-213ENST00000485530 EMILIN1Q9Y6C2 1016 aa16.68■□□□□ 0.26
TRA2B-213ENST00000485530 PEAK1Q9H792 1746 aa16.67■□□□□ 0.26
TRA2B-213ENST00000485530 KIF20BQ96Q89 1820 aa16.67■□□□□ 0.26
TRA2B-213ENST00000485530 AATKQ6ZMQ8 1374 aa16.66■□□□□ 0.26
TRA2B-213ENST00000485530 LARP1Q6PKG0 1096 aaKnown RBP16.66■□□□□ 0.26
TRA2B-213ENST00000485530 IP6K1Q92551 441 aa16.66■□□□□ 0.26
TRA2B-213ENST00000485530 TCP11L2Q8N4U5 519 aa16.65■□□□□ 0.26
TRA2B-213ENST00000485530 COL18A1P39060 1754 aa16.64■□□□□ 0.25
TRA2B-213ENST00000485530 HOXC9P31274 260 aa16.64■□□□□ 0.25
TRA2B-213ENST00000485530 HSP90AB2PQ58FF8 381 aa16.64■□□□□ 0.25
TRA2B-213ENST00000485530 ANO8Q9HCE9 1232 aaPredicted RBP16.64■□□□□ 0.25
TRA2B-213ENST00000485530 LRRC37A3O60309 1634 aa16.63■□□□□ 0.25
TRA2B-213ENST00000485530 OVOS2A0A0G2JMS6 1433 aa16.63■□□□□ 0.25
TRA2B-213ENST00000485530 EVA1CP58658 441 aa16.63■□□□□ 0.25
TRA2B-213ENST00000485530 ZNF784Q8NCA9 323 aaPredicted RBP16.63■□□□□ 0.25
TRA2B-213ENST00000485530 COL5A2P05997 1499 aaPredicted RBP16.62■□□□□ 0.25
TRA2B-213ENST00000485530 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
TRA2B-213ENST00000485530 AMPHP49418 695 aa16.62■□□□□ 0.25
TRA2B-213ENST00000485530 MTHFSP49914 203 aa16.62■□□□□ 0.25
TRA2B-213ENST00000485530 THRAP3Q9Y2W1 955 aaKnown RBP16.62■□□□□ 0.25
TRA2B-213ENST00000485530 SBF2Q86WG5 1849 aa16.61■□□□□ 0.25
TRA2B-213ENST00000485530 PPP2R1AP30153 589 aa16.61■□□□□ 0.25
TRA2B-213ENST00000485530 ANKRD26Q9UPS8 1709 aa16.6■□□□□ 0.25
TRA2B-213ENST00000485530 PLSCR1O15162 318 aa16.59■□□□□ 0.25
TRA2B-213ENST00000485530 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
TRA2B-213ENST00000485530 PTGER2P43116 358 aa16.58■□□□□ 0.24
TRA2B-213ENST00000485530 ANKRD24Q8TF21 1146 aa16.58■□□□□ 0.24
TRA2B-213ENST00000485530 LTV1Q96GA3 475 aaPredicted RBP16.58■□□□□ 0.24
TRA2B-213ENST00000485530 PRKRIP1Q9H875 184 aaPredicted RBP16.58■□□□□ 0.24
TRA2B-213ENST00000485530 CRB1P82279 1406 aa16.58■□□□□ 0.24
TRA2B-213ENST00000485530 MAP2P11137 1827 aaKnown RBP16.56■□□□□ 0.24
TRA2B-213ENST00000485530 LTN1O94822 1766 aa16.56■□□□□ 0.24
TRA2B-213ENST00000485530 SMG6Q86US8 1419 aaKnown RBP16.56■□□□□ 0.24
TRA2B-213ENST00000485530 INSRP06213 1382 aa16.56■□□□□ 0.24
TRA2B-213ENST00000485530 FLT4P35916 1363 aa16.56■□□□□ 0.24
TRA2B-213ENST00000485530 KIF24Q5T7B8 1368 aa16.56■□□□□ 0.24
TRA2B-213ENST00000485530 ERBB3P21860 1342 aa16.56■□□□□ 0.24
TRA2B-213ENST00000485530 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms