RNA–Protein interactions for RNA: ENST00000485499.1

PTPRT-208, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 3

Gene PTPRT, Length 208 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-208ENST00000485499 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.95□□□□□ -0.82
PTPRT-208ENST00000485499 CCDC18Q5T9S5 1454 aa9.94□□□□□ -0.82
PTPRT-208ENST00000485499 ARHGAP35Q9NRY4 1499 aa9.94□□□□□ -0.82
PTPRT-208ENST00000485499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.94□□□□□ -0.82
PTPRT-208ENST00000485499 TJAP1Q5JTD0 557 aa9.94□□□□□ -0.82
PTPRT-208ENST00000485499 KRI1Q8N9T8 703 aaKnown RBP9.94□□□□□ -0.82
PTPRT-208ENST00000485499 HPS5Q9UPZ3 1129 aa9.94□□□□□ -0.82
PTPRT-208ENST00000485499 LRCH3Q96II8 777 aa9.93□□□□□ -0.82
PTPRT-208ENST00000485499 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
PTPRT-208ENST00000485499 FAM161AQ3B820 660 aa9.92□□□□□ -0.82
PTPRT-208ENST00000485499 FBXO31Q5XUX0 539 aaPredicted RBP9.92□□□□□ -0.82
PTPRT-208ENST00000485499 TRIM52Q96A61 297 aa9.92□□□□□ -0.82
PTPRT-208ENST00000485499 ZNF777Q9ULD5 760 aaPredicted RBP9.92□□□□□ -0.82
PTPRT-208ENST00000485499 PDZRN3Q9UPQ7 1066 aa9.92□□□□□ -0.82
PTPRT-208ENST00000485499 LRP6O75581 1613 aa9.92□□□□□ -0.82
PTPRT-208ENST00000485499 TIAM1Q13009 1591 aa9.92□□□□□ -0.82
PTPRT-208ENST00000485499 MAP3K1Q13233 1512 aa9.92□□□□□ -0.82
PTPRT-208ENST00000485499 LRRC9Q6ZRR7 1453 aa9.91□□□□□ -0.82
PTPRT-208ENST00000485499 PLEKHH2Q8IVE3 1493 aa9.91□□□□□ -0.82
PTPRT-208ENST00000485499 FAM135BQ49AJ0 1406 aa9.91□□□□□ -0.82
PTPRT-208ENST00000485499 SLC4A3P48751 1232 aa9.91□□□□□ -0.82
PTPRT-208ENST00000485499 TMEM134Q9H6X4 195 aa9.91□□□□□ -0.82
PTPRT-208ENST00000485499 KDM5AP29375 1690 aaKnown RBP9.9□□□□□ -0.82
PTPRT-208ENST00000485499 PPP1R18Q6NYC8 613 aa9.9□□□□□ -0.82
PTPRT-208ENST00000485499 SAMD7Q7Z3H4 446 aa9.9□□□□□ -0.82
PTPRT-208ENST00000485499 THEMISQ8N1K5 641 aaPredicted RBP9.9□□□□□ -0.82
PTPRT-208ENST00000485499 NECTIN2Q92692 538 aa9.9□□□□□ -0.82
PTPRT-208ENST00000485499 CCDC102AQ96A19 550 aa9.9□□□□□ -0.82
PTPRT-208ENST00000485499 SCAF11Q99590 1463 aaKnown RBP9.9□□□□□ -0.83
PTPRT-208ENST00000485499 GPATCH8Q9UKJ3 1502 aaKnown RBP9.89□□□□□ -0.83
PTPRT-208ENST00000485499 HNRNPMP52272 730 aaKnown RBP eCLIP9.89□□□□□ -0.83
PTPRT-208ENST00000485499 EEA1Q15075 1411 aa9.89□□□□□ -0.83
PTPRT-208ENST00000485499 SLF2Q8IX21 1173 aa9.88□□□□□ -0.83
PTPRT-208ENST00000485499 PIK3C2BO00750 1634 aa9.88□□□□□ -0.83
PTPRT-208ENST00000485499 MIA2Q96PC5 1412 aa9.88□□□□□ -0.83
PTPRT-208ENST00000485499 MYO5BQ9ULV0 1848 aa9.87□□□□□ -0.83
PTPRT-208ENST00000485499 SWT1Q5T5J6 900 aaKnown RBP9.87□□□□□ -0.83
PTPRT-208ENST00000485499 KIAA1107Q9UPP5 1409 aa9.87□□□□□ -0.83
PTPRT-208ENST00000485499 NWD1Q149M9 1564 aa9.87□□□□□ -0.83
PTPRT-208ENST00000485499 SETBP1Q9Y6X0 1596 aa9.87□□□□□ -0.83
PTPRT-208ENST00000485499 JCADQ9P266 1359 aa9.87□□□□□ -0.83
PTPRT-208ENST00000485499 CHD2O14647 1828 aaKnown RBP9.86□□□□□ -0.83
PTPRT-208ENST00000485499 CDK12Q9NYV4 1490 aaPredicted RBP9.86□□□□□ -0.83
PTPRT-208ENST00000485499 AK7Q96M32 723 aa9.86□□□□□ -0.83
PTPRT-208ENST00000485499 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.86□□□□□ -0.83
PTPRT-208ENST00000485499 PPP4CP60510 307 aa9.85□□□□□ -0.83
PTPRT-208ENST00000485499 PHOX2BQ99453 314 aa9.85□□□□□ -0.83
PTPRT-208ENST00000485499 IL21Q9HBE4 155 aa9.85□□□□□ -0.83
PTPRT-208ENST00000485499 DAXXQ9UER7 740 aaPredicted RBP9.85□□□□□ -0.83
PTPRT-208ENST00000485499 ABCC3O15438 1527 aa9.85□□□□□ -0.83
PTPRT-208ENST00000485499 SLIT1O75093 1534 aa9.85□□□□□ -0.83
PTPRT-208ENST00000485499 EIF2AK4Q9P2K8 1649 aaKnown RBP9.85□□□□□ -0.83
PTPRT-208ENST00000485499 EP400Q96L91 3159 aa9.85□□□□□ -0.83
PTPRT-208ENST00000485499 ERVK-7P63135 1459 aa9.85□□□□□ -0.83
PTPRT-208ENST00000485499 MEX3CQ5U5Q3 659 aaKnown RBP9.84□□□□□ -0.83
PTPRT-208ENST00000485499 CASKIN1Q8WXD9 1431 aa9.83□□□□□ -0.84
PTPRT-208ENST00000485499 RSPH4AQ5TD94 716 aa9.83□□□□□ -0.84
PTPRT-208ENST00000485499 ZNF772Q68DY9 489 aaPredicted RBP9.83□□□□□ -0.84
PTPRT-208ENST00000485499 TMEM94Q12767 1356 aa9.83□□□□□ -0.84
PTPRT-208ENST00000485499 FYCO1Q9BQS8 1478 aa9.83□□□□□ -0.84
PTPRT-208ENST00000485499 ARHGAP23Q9P227 1491 aa9.83□□□□□ -0.84
PTPRT-208ENST00000485499 WASHC2CQ9Y4E1 1318 aa9.82□□□□□ -0.84
PTPRT-208ENST00000485499 PRDM15P57071 1507 aaPredicted RBP9.82□□□□□ -0.84
PTPRT-208ENST00000485499 LRP5O75197 1615 aa9.82□□□□□ -0.84
PTPRT-208ENST00000485499 AHDC1Q5TGY3 1603 aaPredicted RBP9.82□□□□□ -0.84
PTPRT-208ENST00000485499 MROH1Q8NDA8 1641 aa9.82□□□□□ -0.84
PTPRT-208ENST00000485499 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.82□□□□□ -0.84
PTPRT-208ENST00000485499 CLCN1P35523 988 aa9.82□□□□□ -0.84
PTPRT-208ENST00000485499 AMHR2Q16671 573 aa9.82□□□□□ -0.84
PTPRT-208ENST00000485499 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
PTPRT-208ENST00000485499 MTRQ99707 1265 aa9.82□□□□□ -0.84
PTPRT-208ENST00000485499 NKTRP30414 1462 aaKnown RBP9.82□□□□□ -0.84
PTPRT-208ENST00000485499 NCOA2Q15596 1464 aa9.82□□□□□ -0.84
PTPRT-208ENST00000485499 RGS12O14924 1447 aa9.82□□□□□ -0.84
PTPRT-208ENST00000485499 DHX29Q7Z478 1369 aaKnown RBP9.81□□□□□ -0.84
PTPRT-208ENST00000485499 KIF3BO15066 747 aa9.81□□□□□ -0.84
PTPRT-208ENST00000485499 SULF1Q8IWU6 871 aa9.81□□□□□ -0.84
PTPRT-208ENST00000485499 SLC24A3Q9HC58 644 aa9.81□□□□□ -0.84
PTPRT-208ENST00000485499 RTEL1-TNFRSF6BF6WH68 1400 aa9.81□□□□□ -0.84
PTPRT-208ENST00000485499 DIP2AQ14689 1571 aa9.8□□□□□ -0.84
PTPRT-208ENST00000485499 TRIM66O15016 1216 aa9.8□□□□□ -0.84
PTPRT-208ENST00000485499 RNF40O75150 1001 aa9.8□□□□□ -0.84
PTPRT-208ENST00000485499 GPCPD1Q9NPB8 672 aa9.8□□□□□ -0.84
PTPRT-208ENST00000485499 FGD6Q6ZV73 1430 aa9.8□□□□□ -0.84
PTPRT-208ENST00000485499 MBD5Q9P267 1494 aa9.79□□□□□ -0.84
PTPRT-208ENST00000485499 NHSL1Q5SYE7 1610 aa9.79□□□□□ -0.84
PTPRT-208ENST00000485499 CCNB3Q8WWL7 1395 aa9.79□□□□□ -0.84
PTPRT-208ENST00000485499 RXRBP28702 533 aa9.79□□□□□ -0.84
PTPRT-208ENST00000485499 TREML4Q6UXN2 200 aa9.79□□□□□ -0.84
PTPRT-208ENST00000485499 PRR14Q9BWN1 585 aa9.79□□□□□ -0.84
PTPRT-208ENST00000485499 CFDP1Q9UEE9 299 aaPredicted RBP9.79□□□□□ -0.84
PTPRT-208ENST00000485499 SPATA31A6Q5VVP1 1343 aa9.79□□□□□ -0.84
PTPRT-208ENST00000485499 CAMSAP2Q08AD1 1489 aa9.79□□□□□ -0.84
PTPRT-208ENST00000485499 CCDC141Q6ZP82 1450 aa9.79□□□□□ -0.84
PTPRT-208ENST00000485499 MSH6P52701 1360 aa9.78□□□□□ -0.84
PTPRT-208ENST00000485499 MDM2Q00987 491 aaPredicted RBP9.78□□□□□ -0.84
PTPRT-208ENST00000485499 TPRNQ4KMQ1 711 aa9.78□□□□□ -0.84
PTPRT-208ENST00000485499 NLRP7Q8WX94 980 aa9.77□□□□□ -0.85
PTPRT-208ENST00000485499 TMUB1Q9BVT8 246 aa9.77□□□□□ -0.85
PTPRT-208ENST00000485499 TET3O43151 1660 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms