RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.36■■□□□ 1.97
COL27A1-205ENST00000485397 OVOS2A0A0G2JMS6 1433 aa27.35■■□□□ 1.97
COL27A1-205ENST00000485397 OVOS2A0A0J9YW53 1432 aa27.35■■□□□ 1.97
COL27A1-205ENST00000485397 OVOS2Q6IE36 1432 aa27.35■■□□□ 1.97
COL27A1-205ENST00000485397 CSB-PGBD3P0DP91 1061 aa27.35■■□□□ 1.97
COL27A1-205ENST00000485397 LRRC37A3O60309 1634 aa27.34■■□□□ 1.97
COL27A1-205ENST00000485397 C11orf95C9JLR9 678 aaPredicted RBP27.34■■□□□ 1.97
COL27A1-205ENST00000485397 TMC1Q8TDI8 760 aa27.34■■□□□ 1.97
COL27A1-205ENST00000485397 TONSLQ96HA7 1378 aa27.34■■□□□ 1.97
COL27A1-205ENST00000485397 RREB1Q92766 1687 aa27.33■■□□□ 1.97
COL27A1-205ENST00000485397 PEAK1Q9H792 1746 aa27.33■■□□□ 1.97
COL27A1-205ENST00000485397 NFAT5O94916 1531 aa27.33■■□□□ 1.97
COL27A1-205ENST00000485397 CARD10Q9BWT7 1032 aa27.33■■□□□ 1.97
COL27A1-205ENST00000485397 NBPF14Q5TI25 921 aa27.32■■□□□ 1.96
COL27A1-205ENST00000485397 RGPD5Q99666 1765 aa27.32■■□□□ 1.96
COL27A1-205ENST00000485397 CD163L1Q9NR16 1453 aa27.32■■□□□ 1.96
COL27A1-205ENST00000485397 NUP188Q5SRE5 1749 aa27.31■■□□□ 1.96
COL27A1-205ENST00000485397 MON2Q7Z3U7 1717 aa27.31■■□□□ 1.96
COL27A1-205ENST00000485397 PTF1AQ7RTS3 328 aa27.31■■□□□ 1.96
COL27A1-205ENST00000485397 NME9Q86XW9 330 aa27.31■■□□□ 1.96
COL27A1-205ENST00000485397 MARCH10Q8NA82 808 aaPredicted RBP27.31■■□□□ 1.96
COL27A1-205ENST00000485397 SLC12A5Q9H2X9 1139 aa27.31■■□□□ 1.96
COL27A1-205ENST00000485397 CDCA7Q9BWT1 371 aaPredicted RBP27.3■■□□□ 1.96
COL27A1-205ENST00000485397 USP31Q70CQ4 1352 aa27.3■■□□□ 1.96
COL27A1-205ENST00000485397 HDGFL2Q7Z4V5 671 aaPredicted RBP27.27■■□□□ 1.96
COL27A1-205ENST00000485397 WNK3Q9BYP7 1800 aa27.27■■□□□ 1.96
COL27A1-205ENST00000485397 BCL11BQ9C0K0 894 aaPredicted RBP27.26■■□□□ 1.95
COL27A1-205ENST00000485397 PLSCR1O15162 318 aa27.25■■□□□ 1.95
COL27A1-205ENST00000485397 SBF2Q86WG5 1849 aa27.25■■□□□ 1.95
COL27A1-205ENST00000485397 CCDC7Q96M83 1385 aa27.23■■□□□ 1.95
COL27A1-205ENST00000485397 EXOC5O00471 708 aa27.23■■□□□ 1.95
COL27A1-205ENST00000485397 ABCC6O95255 1503 aa27.21■■□□□ 1.95
COL27A1-205ENST00000485397 TERF2IPQ9NYB0 399 aa27.21■■□□□ 1.95
COL27A1-205ENST00000485397 BCL9O00512 1426 aa27.21■■□□□ 1.95
COL27A1-205ENST00000485397 A0A1W2PP64 1363 aa27.21■■□□□ 1.95
COL27A1-205ENST00000485397 EDC4Q6P2E9 1401 aaKnown RBP27.2■■□□□ 1.94
COL27A1-205ENST00000485397 PUS7Q96PZ0 661 aaKnown RBP27.2■■□□□ 1.94
COL27A1-205ENST00000485397 USP54Q70EL1 1684 aa27.2■■□□□ 1.94
COL27A1-205ENST00000485397 ERBB3P21860 1342 aa27.19■■□□□ 1.94
COL27A1-205ENST00000485397 PROM2Q8N271 834 aa27.19■■□□□ 1.94
COL27A1-205ENST00000485397 TESK2Q96S53 571 aa27.19■■□□□ 1.94
COL27A1-205ENST00000485397 NLRP2Q9NX02 1062 aa27.19■■□□□ 1.94
COL27A1-205ENST00000485397 ST20-MTHFSA0A0A6YYL1 179 aa27.18■■□□□ 1.94
COL27A1-205ENST00000485397 ANO8Q9HCE9 1232 aaPredicted RBP27.18■■□□□ 1.94
COL27A1-205ENST00000485397 ANKRD24Q8TF21 1146 aa27.16■■□□□ 1.94
COL27A1-205ENST00000485397 RGPD3A6NKT7 1758 aaPredicted RBP27.16■■□□□ 1.94
COL27A1-205ENST00000485397 RGPD4Q7Z3J3 1758 aa27.16■■□□□ 1.94
COL27A1-205ENST00000485397 TNS2Q63HR2 1409 aa27.15■■□□□ 1.94
COL27A1-205ENST00000485397 KCNQ2O43526 872 aa27.14■■□□□ 1.94
COL27A1-205ENST00000485397 SPON1Q9HCB6 807 aa27.14■■□□□ 1.94
COL27A1-205ENST00000485397 LTN1O94822 1766 aa27.14■■□□□ 1.93
COL27A1-205ENST00000485397 IL2RBP14784 551 aa27.12■■□□□ 1.93
COL27A1-205ENST00000485397 ACSBG1Q96GR2 724 aa27.11■■□□□ 1.93
COL27A1-205ENST00000485397 TXNRD1Q16881 649 aa27.1■■□□□ 1.93
COL27A1-205ENST00000485397 TRIM26Q12899 539 aaPredicted RBP27.09■■□□□ 1.93
COL27A1-205ENST00000485397 IP6K1Q92551 441 aa27.09■■□□□ 1.93
COL27A1-205ENST00000485397 PDGFDQ9GZP0 370 aaPredicted RBP27.09■■□□□ 1.93
COL27A1-205ENST00000485397 PPP1R1BQ9UD71 204 aaPredicted RBP27.09■■□□□ 1.93
COL27A1-205ENST00000485397 NINLQ9Y2I6 1382 aa27.09■■□□□ 1.93
COL27A1-205ENST00000485397 LTV1Q96GA3 475 aaPredicted RBP27.07■■□□□ 1.92
COL27A1-205ENST00000485397 FBLN1P23142 703 aa27.06■■□□□ 1.92
COL27A1-205ENST00000485397 COG3Q96JB2 828 aa27.06■■□□□ 1.92
COL27A1-205ENST00000485397 SLC24A1O60721 1099 aa27.04■■□□□ 1.92
COL27A1-205ENST00000485397 STK32BQ9NY57 414 aa27.04■■□□□ 1.92
COL27A1-205ENST00000485397 MAP3K19Q56UN5 1328 aa27.03■■□□□ 1.92
COL27A1-205ENST00000485397 CASZ1Q86V15 1759 aa27.02■■□□□ 1.92
COL27A1-205ENST00000485397 ZBTB7AO95365 584 aa27.02■■□□□ 1.92
COL27A1-205ENST00000485397 NHSQ6T4R5 1651 aa27.01■■□□□ 1.92
COL27A1-205ENST00000485397 SLC15A2Q16348 729 aa27.01■■□□□ 1.91
COL27A1-205ENST00000485397 ANKRD36BQ8N2N9 1353 aa27■■□□□ 1.91
COL27A1-205ENST00000485397 USP47Q96K76 1375 aa26.99■■□□□ 1.91
COL27A1-205ENST00000485397 HOXC9P31274 260 aa26.99■■□□□ 1.91
COL27A1-205ENST00000485397 AMPHP49418 695 aa26.99■■□□□ 1.91
COL27A1-205ENST00000485397 TMF1P82094 1093 aa26.99■■□□□ 1.91
COL27A1-205ENST00000485397 DDX54Q8TDD1 881 aaKnown RBP26.98■■□□□ 1.91
COL27A1-205ENST00000485397 ATF5Q9Y2D1 282 aaPredicted RBP26.98■■□□□ 1.91
COL27A1-205ENST00000485397 FYB1O15117 783 aa26.95■■□□□ 1.9
COL27A1-205ENST00000485397 PTGER2P43116 358 aa26.95■■□□□ 1.9
COL27A1-205ENST00000485397 GGNBP2Q9H3C7 697 aa26.95■■□□□ 1.9
COL27A1-205ENST00000485397 RRS1Q15050 365 aaKnown RBP26.94■■□□□ 1.9
COL27A1-205ENST00000485397 KAT6BQ8WYB5 2073 aa26.94■■□□□ 1.9
COL27A1-205ENST00000485397 BTAF1O14981 1849 aa26.93■■□□□ 1.9
COL27A1-205ENST00000485397 FAM208AQ9UK61 1670 aaKnown RBP26.92■■□□□ 1.9
COL27A1-205ENST00000485397 LRRC4BQ9NT99 713 aa26.91■■□□□ 1.9
COL27A1-205ENST00000485397 ZNF827Q17R98 1081 aa26.88■■□□□ 1.89
COL27A1-205ENST00000485397 NBPF6Q5VWK0 638 aa26.88■■□□□ 1.89
COL27A1-205ENST00000485397 NBPF4Q96M43 638 aa26.88■■□□□ 1.89
COL27A1-205ENST00000485397 MTFR1LQ9H019 292 aa26.88■■□□□ 1.89
COL27A1-205ENST00000485397 RGPD2P0DJD1 1756 aa26.88■■□□□ 1.89
COL27A1-205ENST00000485397 PAPPAQ13219 1627 aa26.87■■□□□ 1.89
COL27A1-205ENST00000485397 RTL1A6NKG5 1358 aa26.87■■□□□ 1.89
COL27A1-205ENST00000485397 MEGF6O75095 1541 aa26.87■■□□□ 1.89
COL27A1-205ENST00000485397 MYOM1P52179 1685 aa26.87■■□□□ 1.89
COL27A1-205ENST00000485397 DCAF8L1A6NGE4 600 aa26.87■■□□□ 1.89
COL27A1-205ENST00000485397 YY1P25490 414 aa26.87■■□□□ 1.89
COL27A1-205ENST00000485397 ZCRB1Q8TBF4 217 aaKnown RBP26.87■■□□□ 1.89
COL27A1-205ENST00000485397 PRIM1P49642 420 aaKnown RBP26.86■■□□□ 1.89
COL27A1-205ENST00000485397 CDCA8Q53HL2 280 aa26.86■■□□□ 1.89
COL27A1-205ENST00000485397 USHBP1Q8N6Y0 703 aa26.86■■□□□ 1.89
COL27A1-205ENST00000485397 SYTL4Q96C24 671 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms