RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 HOXC9P31274 260 aa24.08■■□□□ 1.45
NECTIN3-206ENST00000485303 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.08■■□□□ 1.45
NECTIN3-206ENST00000485303 KCNH5Q8NCM2 988 aa24.08■■□□□ 1.45
NECTIN3-206ENST00000485303 NFE2L2Q16236 605 aa24.08■■□□□ 1.45
NECTIN3-206ENST00000485303 NPHP3Q7Z494 1330 aa24.08■■□□□ 1.45
NECTIN3-206ENST00000485303 SLAIN2Q9P270 581 aa24.08■■□□□ 1.44
NECTIN3-206ENST00000485303 PNPLA6Q8IY17 1366 aa24.08■■□□□ 1.44
NECTIN3-206ENST00000485303 BCAR3O75815 825 aa24.07■■□□□ 1.44
NECTIN3-206ENST00000485303 ZNF521Q96K83 1311 aa24.06■■□□□ 1.44
NECTIN3-206ENST00000485303 EYA1Q99502 592 aa24.06■■□□□ 1.44
NECTIN3-206ENST00000485303 RTF1Q92541 710 aaKnown RBP24.06■■□□□ 1.44
NECTIN3-206ENST00000485303 PPP4R2Q9NY27 417 aa24.06■■□□□ 1.44
NECTIN3-206ENST00000485303 EXOC6Q8TAG9 804 aa24.06■■□□□ 1.44
NECTIN3-206ENST00000485303 MON2Q7Z3U7 1717 aa24.06■■□□□ 1.44
NECTIN3-206ENST00000485303 CHRNA2Q15822 529 aa24.05■■□□□ 1.44
NECTIN3-206ENST00000485303 WDR63Q8IWG1 891 aa24.05■■□□□ 1.44
NECTIN3-206ENST00000485303 FMN2Q9NZ56 1722 aa24.05■■□□□ 1.44
NECTIN3-206ENST00000485303 SBNO1A3KN83 1393 aa24.05■■□□□ 1.44
NECTIN3-206ENST00000485303 LRRC59Q96AG4 307 aaKnown RBP24.05■■□□□ 1.44
NECTIN3-206ENST00000485303 CDK12Q9NYV4 1490 aaPredicted RBP24.04■■□□□ 1.44
NECTIN3-206ENST00000485303 EXOSC9Q06265 439 aaKnown RBP24.04■■□□□ 1.44
NECTIN3-206ENST00000485303 TRIM35Q9UPQ4 493 aa24.04■■□□□ 1.44
NECTIN3-206ENST00000485303 SSH2Q76I76 1423 aa24.03■■□□□ 1.44
NECTIN3-206ENST00000485303 AKAP12Q02952 1782 aa24.03■■□□□ 1.44
NECTIN3-206ENST00000485303 TCERG1O14776 1098 aaKnown RBP24.03■■□□□ 1.44
NECTIN3-206ENST00000485303 MCM10Q7L590 875 aa24.03■■□□□ 1.44
NECTIN3-206ENST00000485303 COL3A1P02461 1466 aaPredicted RBP24.02■■□□□ 1.44
NECTIN3-206ENST00000485303 BRINP3Q76B58 766 aa24.01■■□□□ 1.43
NECTIN3-206ENST00000485303 CLUAP1Q96AJ1 413 aa24.01■■□□□ 1.43
NECTIN3-206ENST00000485303 NLRP2Q9NX02 1062 aa24.01■■□□□ 1.43
NECTIN3-206ENST00000485303 USP31Q70CQ4 1352 aa24.01■■□□□ 1.43
NECTIN3-206ENST00000485303 ANKRD26Q9UPS8 1709 aa24.01■■□□□ 1.43
NECTIN3-206ENST00000485303 LMOD3Q0VAK6 560 aa24■■□□□ 1.43
NECTIN3-206ENST00000485303 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
NECTIN3-206ENST00000485303 SHPRHQ149N8 1683 aa24■■□□□ 1.43
NECTIN3-206ENST00000485303 TOPAZ1Q8N9V7 1692 aa24■■□□□ 1.43
NECTIN3-206ENST00000485303 PIP4K2BP78356 416 aa23.99■■□□□ 1.43
NECTIN3-206ENST00000485303 CRBNQ96SW2 442 aa23.99■■□□□ 1.43
NECTIN3-206ENST00000485303 C20orf194Q5TEA3 1177 aa23.99■■□□□ 1.43
NECTIN3-206ENST00000485303 FANCIQ9NVI1 1328 aa23.98■■□□□ 1.43
NECTIN3-206ENST00000485303 SMC4Q9NTJ3 1288 aa23.98■■□□□ 1.43
NECTIN3-206ENST00000485303 MST1RQ04912 1400 aa23.98■■□□□ 1.43
NECTIN3-206ENST00000485303 IP6K1Q92551 441 aa23.97■■□□□ 1.43
NECTIN3-206ENST00000485303 CALD1Q05682 793 aaKnown RBP23.97■■□□□ 1.43
NECTIN3-206ENST00000485303 CCDC27Q2M243 656 aa23.97■■□□□ 1.43
NECTIN3-206ENST00000485303 ANKRD24Q8TF21 1146 aa23.96■■□□□ 1.43
NECTIN3-206ENST00000485303 LRRC7Q96NW7 1537 aa23.96■■□□□ 1.43
NECTIN3-206ENST00000485303 MIS18AQ9NYP9 233 aa23.96■■□□□ 1.43
NECTIN3-206ENST00000485303 PRDM11Q9NQV5 511 aa23.95■■□□□ 1.42
NECTIN3-206ENST00000485303 MTHFSDQ2M296 383 aaKnown RBP23.94■■□□□ 1.42
NECTIN3-206ENST00000485303 NBPF6Q5VWK0 638 aa23.94■■□□□ 1.42
NECTIN3-206ENST00000485303 NBPF4Q96M43 638 aa23.94■■□□□ 1.42
NECTIN3-206ENST00000485303 NWD1Q149M9 1564 aa23.93■■□□□ 1.42
NECTIN3-206ENST00000485303 GNAI1P63096 354 aa23.92■■□□□ 1.42
NECTIN3-206ENST00000485303 ARHGEF25Q86VW2 580 aa23.91■■□□□ 1.42
NECTIN3-206ENST00000485303 FTSJ3Q8IY81 847 aaKnown RBP23.91■■□□□ 1.42
NECTIN3-206ENST00000485303 PIK3C2AO00443 1686 aa23.91■■□□□ 1.42
NECTIN3-206ENST00000485303 GAS2L2Q8NHY3 880 aa23.9■■□□□ 1.42
NECTIN3-206ENST00000485303 PANK1Q8TE04 598 aa23.9■■□□□ 1.42
NECTIN3-206ENST00000485303 STRN4Q9NRL3 753 aa23.9■■□□□ 1.42
NECTIN3-206ENST00000485303 USP35Q9P2H5 1018 aa23.9■■□□□ 1.42
NECTIN3-206ENST00000485303 AXIN2Q9Y2T1 843 aa23.89■■□□□ 1.42
NECTIN3-206ENST00000485303 TRMT2AQ8IZ69 625 aaKnown RBP23.89■■□□□ 1.41
NECTIN3-206ENST00000485303 COG6Q9Y2V7 657 aa23.89■■□□□ 1.41
NECTIN3-206ENST00000485303 NRKQ7Z2Y5 1582 aa23.89■■□□□ 1.41
NECTIN3-206ENST00000485303 IQSEC2Q5JU85 1478 aa23.88■■□□□ 1.41
NECTIN3-206ENST00000485303 ERICH6BQ5W0A0 696 aa23.88■■□□□ 1.41
NECTIN3-206ENST00000485303 RARSP54136 660 aaKnown RBP23.88■■□□□ 1.41
NECTIN3-206ENST00000485303 PHF23Q9BUL5 403 aaPredicted RBP23.88■■□□□ 1.41
NECTIN3-206ENST00000485303 STRCP1A6NGW2 1772 aa23.87■■□□□ 1.41
NECTIN3-206ENST00000485303 ZNF530Q6P9A1 599 aaPredicted RBP23.87■■□□□ 1.41
NECTIN3-206ENST00000485303 MBIPQ9NS73 344 aa23.87■■□□□ 1.41
NECTIN3-206ENST00000485303 TSPYL4Q9UJ04 414 aa23.87■■□□□ 1.41
NECTIN3-206ENST00000485303 IGSF1Q8N6C5 1336 aa23.86■■□□□ 1.41
NECTIN3-206ENST00000485303 RAPGEF4Q8WZA2 1011 aa23.86■■□□□ 1.41
NECTIN3-206ENST00000485303 EVA1CP58658 441 aa23.86■■□□□ 1.41
NECTIN3-206ENST00000485303 SPATA31A3Q5VYP0 1347 aa23.85■■□□□ 1.41
NECTIN3-206ENST00000485303 STRCQ7RTU9 1775 aa23.85■■□□□ 1.41
NECTIN3-206ENST00000485303 ARHGEF10O15013 1369 aa23.85■■□□□ 1.41
NECTIN3-206ENST00000485303 DCCP43146 1447 aa23.85■■□□□ 1.41
NECTIN3-206ENST00000485303 NECTIN2Q92692 538 aa23.85■■□□□ 1.41
NECTIN3-206ENST00000485303 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
NECTIN3-206ENST00000485303 C1orf141Q5JVX7 400 aa23.84■■□□□ 1.41
NECTIN3-206ENST00000485303 KRT24Q2M2I5 525 aa23.84■■□□□ 1.41
NECTIN3-206ENST00000485303 TNNQ9UQP3 1299 aa23.84■■□□□ 1.41
NECTIN3-206ENST00000485303 SSH1Q8WYL5 1049 aa23.83■■□□□ 1.41
NECTIN3-206ENST00000485303 GNAT3A8MTJ3 354 aa23.83■■□□□ 1.4
NECTIN3-206ENST00000485303 NCOA3Q9Y6Q9 1424 aa23.82■■□□□ 1.4
NECTIN3-206ENST00000485303 TOM1L2Q6ZVM7 507 aa23.82■■□□□ 1.4
NECTIN3-206ENST00000485303 TSPYL6Q8N831 410 aa23.82■■□□□ 1.4
NECTIN3-206ENST00000485303 TWISTNBQ3B726 338 aaPredicted RBP23.82■■□□□ 1.4
NECTIN3-206ENST00000485303 KIAA0232Q92628 1395 aa23.82■■□□□ 1.4
NECTIN3-206ENST00000485303 BCL11AQ9H165 835 aa23.82■■□□□ 1.4
NECTIN3-206ENST00000485303 IFT57Q9NWB7 429 aa23.82■■□□□ 1.4
NECTIN3-206ENST00000485303 PLEKHO1Q53GL0 409 aaPredicted RBP23.81■■□□□ 1.4
NECTIN3-206ENST00000485303 NUTM2BA6NNL0 878 aaPredicted RBP23.81■■□□□ 1.4
NECTIN3-206ENST00000485303 NUTM2EB1AL46 878 aaPredicted RBP23.81■■□□□ 1.4
NECTIN3-206ENST00000485303 MPRIPQ6WCQ1 1025 aa23.81■■□□□ 1.4
NECTIN3-206ENST00000485303 NUTM2AQ8IVF1 878 aaPredicted RBP23.81■■□□□ 1.4
NECTIN3-206ENST00000485303 CFAP44Q96MT7 982 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms