RNA–Protein interactions for RNA: ENST00000484987.1

COL21A1-210, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 5

Gene COL21A1, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-210ENST00000484987 TSC1Q92574 1164 aa9.5□□□□□ -0.89
COL21A1-210ENST00000484987 TRIM26Q12899 539 aaPredicted RBP9.49□□□□□ -0.89
COL21A1-210ENST00000484987 PSMG3-AS1Q96PY0 264 aa9.49□□□□□ -0.89
COL21A1-210ENST00000484987 TRAIPQ9BWF2 469 aa9.49□□□□□ -0.89
COL21A1-210ENST00000484987 PODXL2Q9NZ53 605 aa9.49□□□□□ -0.89
COL21A1-210ENST00000484987 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
COL21A1-210ENST00000484987 SOX11P35716 441 aa9.47□□□□□ -0.89
COL21A1-210ENST00000484987 HDGFL1Q5TGJ6 251 aa9.47□□□□□ -0.89
COL21A1-210ENST00000484987 KRTAP1-3Q8IUG1 177 aa9.47□□□□□ -0.89
COL21A1-210ENST00000484987 PNMA1Q8ND90 353 aa9.47□□□□□ -0.89
COL21A1-210ENST00000484987 RC3H1Q5TC82 1133 aaKnown RBP9.46□□□□□ -0.9
COL21A1-210ENST00000484987 BMP1P13497 986 aa9.45□□□□□ -0.9
COL21A1-210ENST00000484987 MMP16P51512 607 aa9.45□□□□□ -0.9
COL21A1-210ENST00000484987 LYPD8Q6UX82 237 aa9.45□□□□□ -0.9
COL21A1-210ENST00000484987 ADAMTS19Q8TE59 1207 aa9.45□□□□□ -0.9
COL21A1-210ENST00000484987 ALG2Q9H553 416 aa9.45□□□□□ -0.9
COL21A1-210ENST00000484987 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
COL21A1-210ENST00000484987 SKOR1P84550 965 aa9.44□□□□□ -0.9
COL21A1-210ENST00000484987 NR6A1Q15406 480 aa9.44□□□□□ -0.9
COL21A1-210ENST00000484987 EPS8L1Q8TE68 723 aa9.44□□□□□ -0.9
COL21A1-210ENST00000484987 USB1Q9BQ65 265 aaKnown RBP9.44□□□□□ -0.9
COL21A1-210ENST00000484987 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
COL21A1-210ENST00000484987 IGHA1P01876 353 aa9.43□□□□□ -0.9
COL21A1-210ENST00000484987 PDE4CQ08493 712 aa9.43□□□□□ -0.9
COL21A1-210ENST00000484987 VAC14Q08AM6 782 aa9.43□□□□□ -0.9
COL21A1-210ENST00000484987 TRIM46Q7Z4K8 759 aa9.43□□□□□ -0.9
COL21A1-210ENST00000484987 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
COL21A1-210ENST00000484987 RNF225M0QZC1 329 aaPredicted RBP9.42□□□□□ -0.9
COL21A1-210ENST00000484987 ALDH1A1P00352 501 aa9.42□□□□□ -0.9
COL21A1-210ENST00000484987 GPAT2Q6NUI2 795 aa9.42□□□□□ -0.9
COL21A1-210ENST00000484987 PBXIP1Q96AQ6 731 aa9.41□□□□□ -0.9
COL21A1-210ENST00000484987 RETREG2Q8NC44 543 aa9.4□□□□□ -0.9
COL21A1-210ENST00000484987 ZC3H4Q9UPT8 1303 aaKnown RBP9.39□□□□□ -0.91
COL21A1-210ENST00000484987 DXOO77932 396 aaKnown RBP9.39□□□□□ -0.91
COL21A1-210ENST00000484987 WNT7BP56706 349 aa9.39□□□□□ -0.91
COL21A1-210ENST00000484987 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
COL21A1-210ENST00000484987 CCDC24Q8N4L8 307 aa9.39□□□□□ -0.91
COL21A1-210ENST00000484987 PPP1R12CQ9BZL4 782 aa9.39□□□□□ -0.91
COL21A1-210ENST00000484987 JUNDP17535 347 aa9.38□□□□□ -0.91
COL21A1-210ENST00000484987 EIF4G2P78344 907 aaKnown RBP eCLIP9.38□□□□□ -0.91
COL21A1-210ENST00000484987 PTPRNQ16849 979 aa9.38□□□□□ -0.91
COL21A1-210ENST00000484987 CAPN5O15484 640 aaPredicted RBP9.37□□□□□ -0.91
COL21A1-210ENST00000484987 F12P00748 615 aaPredicted RBP9.37□□□□□ -0.91
COL21A1-210ENST00000484987 SRPK2P78362 688 aaKnown RBP9.37□□□□□ -0.91
COL21A1-210ENST00000484987 NR1H3Q13133 447 aa9.37□□□□□ -0.91
COL21A1-210ENST00000484987 SEMA3FQ13275 785 aa9.37□□□□□ -0.91
COL21A1-210ENST00000484987 FKBPLQ9UIM3 349 aa9.36□□□□□ -0.91
COL21A1-210ENST00000484987 DNMT3AQ9Y6K1 912 aaPredicted RBP9.36□□□□□ -0.91
COL21A1-210ENST00000484987 PALM3A6NDB9 673 aaPredicted RBP9.35□□□□□ -0.91
COL21A1-210ENST00000484987 VSIG8P0DPA2 414 aa9.35□□□□□ -0.91
COL21A1-210ENST00000484987 ZBBXA8MT70 800 aa9.34□□□□□ -0.91
COL21A1-210ENST00000484987 SIAH2O43255 324 aa9.34□□□□□ -0.91
COL21A1-210ENST00000484987 UCN2Q96RP3 112 aa9.34□□□□□ -0.91
COL21A1-210ENST00000484987 USTQ9Y2C2 406 aa9.33□□□□□ -0.92
COL21A1-210ENST00000484987 ARMC2Q8NEN0 867 aa9.32□□□□□ -0.92
COL21A1-210ENST00000484987 GPKOWQ92917 476 aaPredicted RBP eCLIP9.32□□□□□ -0.92
COL21A1-210ENST00000484987 ZFP42Q96MM3 310 aa9.32□□□□□ -0.92
COL21A1-210ENST00000484987 TFIP11Q9UBB9 837 aaKnown RBP9.32□□□□□ -0.92
COL21A1-210ENST00000484987 GPSM3Q9Y4H4 160 aa9.32□□□□□ -0.92
COL21A1-210ENST00000484987 WASF2Q9Y6W5 498 aa9.32□□□□□ -0.92
COL21A1-210ENST00000484987 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.31□□□□□ -0.92
COL21A1-210ENST00000484987 FBXO45P0C2W1 286 aa9.31□□□□□ -0.92
COL21A1-210ENST00000484987 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
COL21A1-210ENST00000484987 EHBP1Q8NDI1 1231 aa9.31□□□□□ -0.92
COL21A1-210ENST00000484987 ZNF592Q92610 1267 aa9.31□□□□□ -0.92
COL21A1-210ENST00000484987 CCNYL3P0C7X3 344 aa9.3□□□□□ -0.92
COL21A1-210ENST00000484987 RFX1P22670 979 aa9.3□□□□□ -0.92
COL21A1-210ENST00000484987 LMOD1P29536 600 aaPredicted RBP9.3□□□□□ -0.92
COL21A1-210ENST00000484987 EVA1BQ9NVM1 165 aa9.3□□□□□ -0.92
COL21A1-210ENST00000484987 MAFBQ9Y5Q3 323 aaPredicted RBP9.3□□□□□ -0.92
COL21A1-210ENST00000484987 PATL2C9JE40 543 aaKnown RBP9.29□□□□□ -0.92
COL21A1-210ENST00000484987 ATP9BO43861 1147 aa9.29□□□□□ -0.92
COL21A1-210ENST00000484987 ADAM23O75077 832 aa9.29□□□□□ -0.92
COL21A1-210ENST00000484987 CSB-PGBD3P0DP91 1061 aa9.29□□□□□ -0.92
COL21A1-210ENST00000484987 MCCD1P59942 119 aaPredicted RBP9.29□□□□□ -0.92
COL21A1-210ENST00000484987 FOXK2Q01167 660 aa9.29□□□□□ -0.92
COL21A1-210ENST00000484987 MAP10Q9P2G4 905 aa9.29□□□□□ -0.92
COL21A1-210ENST00000484987 ADAMTS8Q9UP79 889 aa9.29□□□□□ -0.92
COL21A1-210ENST00000484987 ATG7O95352 703 aa9.28□□□□□ -0.92
COL21A1-210ENST00000484987 KCNH2Q12809 1159 aa9.28□□□□□ -0.92
COL21A1-210ENST00000484987 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
COL21A1-210ENST00000484987 CTHP32929 405 aa9.27□□□□□ -0.93
COL21A1-210ENST00000484987 NUDT12Q9BQG2 462 aa9.27□□□□□ -0.93
COL21A1-210ENST00000484987 CCDC9Q9Y3X0 531 aaKnown RBP9.27□□□□□ -0.93
COL21A1-210ENST00000484987 PTK2Q05397 1052 aa9.26□□□□□ -0.93
COL21A1-210ENST00000484987 NBPF14Q5TI25 921 aa9.26□□□□□ -0.93
COL21A1-210ENST00000484987 TBC1D9Q6ZT07 1266 aa9.26□□□□□ -0.93
COL21A1-210ENST00000484987 SOBPA7XYQ1 873 aa9.25□□□□□ -0.93
COL21A1-210ENST00000484987 PTCRAQ6ISU1 281 aaPredicted RBP9.25□□□□□ -0.93
COL21A1-210ENST00000484987 AEBP1Q8IUX7 1158 aa9.25□□□□□ -0.93
COL21A1-210ENST00000484987 BRD1O95696 1058 aa9.24□□□□□ -0.93
COL21A1-210ENST00000484987 LCE3BQ5TA77 95 aa9.24□□□□□ -0.93
COL21A1-210ENST00000484987 PLEKHM2Q8IWE5 1019 aa9.23□□□□□ -0.93
COL21A1-210ENST00000484987 KCNA1Q09470 495 aa9.22□□□□□ -0.93
COL21A1-210ENST00000484987 ELOAQ14241 798 aaKnown RBP9.22□□□□□ -0.93
COL21A1-210ENST00000484987 KANK4Q5T7N3 995 aaPredicted RBP9.22□□□□□ -0.93
COL21A1-210ENST00000484987 MRPL14Q6P1L8 145 aaKnown RBP9.22□□□□□ -0.93
COL21A1-210ENST00000484987 PURBQ96QR8 312 aaKnown RBP9.22□□□□□ -0.93
COL21A1-210ENST00000484987 VRTNQ9H8Y1 702 aa9.22□□□□□ -0.93
COL21A1-210ENST00000484987 LZTS3O60299 673 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms