RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 BCL11BQ9C0K0 894 aaPredicted RBP7.21□□□□□ -1.25
CNTN4-216ENST00000484686 BTG4Q9NY30 223 aa7.21□□□□□ -1.25
CNTN4-216ENST00000484686 AHDC1Q5TGY3 1603 aaPredicted RBP7.21□□□□□ -1.25
CNTN4-216ENST00000484686 OVOS2A0A0J9YW53 1432 aa7.21□□□□□ -1.25
CNTN4-216ENST00000484686 OVOS2Q6IE36 1432 aa7.21□□□□□ -1.25
CNTN4-216ENST00000484686 MED1Q15648 1581 aaPredicted RBP7.21□□□□□ -1.26
CNTN4-216ENST00000484686 ARHGEF25Q86VW2 580 aa7.21□□□□□ -1.26
CNTN4-216ENST00000484686 TRPM3Q9HCF6 1732 aaPredicted RBP7.21□□□□□ -1.26
CNTN4-216ENST00000484686 NRKQ7Z2Y5 1582 aa7.2□□□□□ -1.26
CNTN4-216ENST00000484686 CSB-PGBD3P0DP91 1061 aa7.2□□□□□ -1.26
CNTN4-216ENST00000484686 EVA1CP58658 441 aa7.2□□□□□ -1.26
CNTN4-216ENST00000484686 RALBP1Q15311 655 aa7.2□□□□□ -1.26
CNTN4-216ENST00000484686 CCDC9Q9Y3X0 531 aaKnown RBP7.2□□□□□ -1.26
CNTN4-216ENST00000484686 USP19O94966 1318 aa7.2□□□□□ -1.26
CNTN4-216ENST00000484686 A0A0U1RQG5 324 aaPredicted RBP7.2□□□□□ -1.26
CNTN4-216ENST00000484686 MRS2Q9HD23 443 aa7.2□□□□□ -1.26
CNTN4-216ENST00000484686 USP31Q70CQ4 1352 aa7.2□□□□□ -1.26
CNTN4-216ENST00000484686 U2SURPO15042 1029 aaKnown RBP7.19□□□□□ -1.26
CNTN4-216ENST00000484686 NEFLP07196 543 aa7.19□□□□□ -1.26
CNTN4-216ENST00000484686 HOXC9P31274 260 aa7.19□□□□□ -1.26
CNTN4-216ENST00000484686 USHBP1Q8N6Y0 703 aa7.19□□□□□ -1.26
CNTN4-216ENST00000484686 PARD3Q8TEW0 1356 aa7.19□□□□□ -1.26
CNTN4-216ENST00000484686 BRD4O60885 1362 aaPredicted RBP7.19□□□□□ -1.26
CNTN4-216ENST00000484686 NSD2O96028 1365 aa7.19□□□□□ -1.26
CNTN4-216ENST00000484686 FAM9BQ8IZU0 186 aa7.19□□□□□ -1.26
CNTN4-216ENST00000484686 ALS2Q96Q42 1657 aa7.19□□□□□ -1.26
CNTN4-216ENST00000484686 MYBBP1AQ9BQG0 1328 aaKnown RBP7.19□□□□□ -1.26
CNTN4-216ENST00000484686 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.19□□□□□ -1.26
CNTN4-216ENST00000484686 NLRP2Q9NX02 1062 aa7.19□□□□□ -1.26
CNTN4-216ENST00000484686 SPATA31A6Q5VVP1 1343 aa7.18□□□□□ -1.26
CNTN4-216ENST00000484686 HMOX1P09601 288 aa7.18□□□□□ -1.26
CNTN4-216ENST00000484686 LARP1Q6PKG0 1096 aaKnown RBP7.18□□□□□ -1.26
CNTN4-216ENST00000484686 SRCAPQ6ZRS2 3230 aa7.18□□□□□ -1.26
CNTN4-216ENST00000484686 NPC1L1Q9UHC9 1359 aa7.18□□□□□ -1.26
CNTN4-216ENST00000484686 TOM1L2Q6ZVM7 507 aa7.18□□□□□ -1.26
CNTN4-216ENST00000484686 ANKRD24Q8TF21 1146 aa7.18□□□□□ -1.26
CNTN4-216ENST00000484686 LRP6O75581 1613 aa7.18□□□□□ -1.26
CNTN4-216ENST00000484686 IP6K1Q92551 441 aa7.17□□□□□ -1.26
CNTN4-216ENST00000484686 USP21Q9UK80 565 aa7.17□□□□□ -1.26
CNTN4-216ENST00000484686 KIF20BQ96Q89 1820 aa7.17□□□□□ -1.26
CNTN4-216ENST00000484686 A0A0G2JS52 829 aa7.17□□□□□ -1.26
CNTN4-216ENST00000484686 EIF4A2Q14240 407 aaKnown RBP7.17□□□□□ -1.26
CNTN4-216ENST00000484686 MAP2P11137 1827 aaKnown RBP7.17□□□□□ -1.26
CNTN4-216ENST00000484686 DIAPH1O60610 1272 aaKnown RBP7.16□□□□□ -1.26
CNTN4-216ENST00000484686 U2AF1L5P0DN76 240 aaPredicted RBP7.16□□□□□ -1.26
CNTN4-216ENST00000484686 U2AF1Q01081 240 aaKnown RBP eCLIP7.16□□□□□ -1.26
CNTN4-216ENST00000484686 NBPF6Q5VWK0 638 aa7.16□□□□□ -1.26
CNTN4-216ENST00000484686 NBPF4Q96M43 638 aa7.16□□□□□ -1.26
CNTN4-216ENST00000484686 AFF2P51816 1311 aa7.16□□□□□ -1.26
CNTN4-216ENST00000484686 AEBP1Q8IUX7 1158 aa7.16□□□□□ -1.26
CNTN4-216ENST00000484686 CFAP53Q96M91 514 aa7.16□□□□□ -1.26
CNTN4-216ENST00000484686 MARF1Q9Y4F3 1742 aaKnown RBP7.16□□□□□ -1.26
CNTN4-216ENST00000484686 FLT4P35916 1363 aa7.16□□□□□ -1.26
CNTN4-216ENST00000484686 AATKQ6ZMQ8 1374 aa7.16□□□□□ -1.26
CNTN4-216ENST00000484686 ERBB3P21860 1342 aa7.16□□□□□ -1.26
CNTN4-216ENST00000484686 HOXD11P31277 338 aaPredicted RBP7.16□□□□□ -1.26
CNTN4-216ENST00000484686 NFAT5O94916 1531 aa7.16□□□□□ -1.26
CNTN4-216ENST00000484686 SULT6B1Q6IMI4 303 aa7.15□□□□□ -1.26
CNTN4-216ENST00000484686 CCDC146Q8IYE0 955 aa7.15□□□□□ -1.26
CNTN4-216ENST00000484686 EYA1Q99502 592 aa7.15□□□□□ -1.26
CNTN4-216ENST00000484686 CAMTA1Q9Y6Y1 1673 aa7.15□□□□□ -1.26
CNTN4-216ENST00000484686 ADAMTS8Q9UP79 889 aa7.15□□□□□ -1.27
CNTN4-216ENST00000484686 SLIT3O75094 1523 aa7.14□□□□□ -1.27
CNTN4-216ENST00000484686 IL13P35225 146 aa7.14□□□□□ -1.27
CNTN4-216ENST00000484686 YTHDC1Q96MU7 727 aaKnown RBP7.14□□□□□ -1.27
CNTN4-216ENST00000484686 QTRT2Q9H974 415 aaKnown RBP7.14□□□□□ -1.27
CNTN4-216ENST00000484686 CPDO75976 1380 aa7.14□□□□□ -1.27
CNTN4-216ENST00000484686 PHRF1Q9P1Y6 1649 aaKnown RBP7.14□□□□□ -1.27
CNTN4-216ENST00000484686 WDR43Q15061 677 aaKnown RBP eCLIP7.14□□□□□ -1.27
CNTN4-216ENST00000484686 NEUROD2Q15784 382 aa7.14□□□□□ -1.27
CNTN4-216ENST00000484686 UNC5CLQ8IV45 518 aa7.14□□□□□ -1.27
CNTN4-216ENST00000484686 DHX37Q8IY37 1157 aaKnown RBP7.14□□□□□ -1.27
CNTN4-216ENST00000484686 LTN1O94822 1766 aa7.14□□□□□ -1.27
CNTN4-216ENST00000484686 FAM98CQ17RN3 349 aaKnown RBP7.14□□□□□ -1.27
CNTN4-216ENST00000484686 FNBP4Q8N3X1 1017 aaPredicted RBP7.14□□□□□ -1.27
CNTN4-216ENST00000484686 INSRP06213 1382 aa7.13□□□□□ -1.27
CNTN4-216ENST00000484686 FGD1P98174 961 aa7.13□□□□□ -1.27
CNTN4-216ENST00000484686 FAM182BQ5T319 152 aa7.13□□□□□ -1.27
CNTN4-216ENST00000484686 RGS17Q9UGC6 210 aaPredicted RBP7.13□□□□□ -1.27
CNTN4-216ENST00000484686 NUDCQ9Y266 331 aa7.13□□□□□ -1.27
CNTN4-216ENST00000484686 PEAK1Q9H792 1746 aa7.13□□□□□ -1.27
CNTN4-216ENST00000484686 SHPRHQ149N8 1683 aa7.13□□□□□ -1.27
CNTN4-216ENST00000484686 PNISRQ8TF01 805 aaKnown RBP7.13□□□□□ -1.27
CNTN4-216ENST00000484686 RGPD5Q99666 1765 aa7.13□□□□□ -1.27
CNTN4-216ENST00000484686 WDR17Q8IZU2 1322 aa7.13□□□□□ -1.27
CNTN4-216ENST00000484686 BCL9LQ86UU0 1499 aa7.13□□□□□ -1.27
CNTN4-216ENST00000484686 RRP7AQ9Y3A4 280 aaKnown RBP7.12□□□□□ -1.27
CNTN4-216ENST00000484686 COL5A2P05997 1499 aaPredicted RBP7.12□□□□□ -1.27
CNTN4-216ENST00000484686 PRKAR2BP31323 418 aa7.12□□□□□ -1.27
CNTN4-216ENST00000484686 PHACTR3Q96KR7 559 aa7.12□□□□□ -1.27
CNTN4-216ENST00000484686 ANKRD26Q9UPS8 1709 aa7.12□□□□□ -1.27
CNTN4-216ENST00000484686 COL22A1Q8NFW1 1626 aaPredicted RBP7.12□□□□□ -1.27
CNTN4-216ENST00000484686 ABCA3Q99758 1704 aa7.12□□□□□ -1.27
CNTN4-216ENST00000484686 CRYBG1Q9Y4K1 1723 aa7.12□□□□□ -1.27
CNTN4-216ENST00000484686 SMG6Q86US8 1419 aaKnown RBP7.12□□□□□ -1.27
CNTN4-216ENST00000484686 POTEAQ6S8J7 498 aa7.12□□□□□ -1.27
CNTN4-216ENST00000484686 DDX54Q8TDD1 881 aaKnown RBP7.12□□□□□ -1.27
CNTN4-216ENST00000484686 RAPGEF4Q8WZA2 1011 aa7.11□□□□□ -1.27
CNTN4-216ENST00000484686 GJD4Q96KN9 370 aaPredicted RBP7.11□□□□□ -1.27
CNTN4-216ENST00000484686 CDK12Q9NYV4 1490 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms