RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 SOS2Q07890 1332 aaPredicted RBP8.76□□□□□ -1.01
PDZRN3-209ENST00000484487 AATKQ6ZMQ8 1374 aa8.75□□□□□ -1.01
PDZRN3-209ENST00000484487 CRYBG1Q9Y4K1 1723 aa8.75□□□□□ -1.01
PDZRN3-209ENST00000484487 TNS3Q68CZ2 1445 aa8.75□□□□□ -1.01
PDZRN3-209ENST00000484487 PPP2R1AP30153 589 aa8.75□□□□□ -1.01
PDZRN3-209ENST00000484487 KCNH5Q8NCM2 988 aa8.75□□□□□ -1.01
PDZRN3-209ENST00000484487 CFAP53Q96M91 514 aa8.75□□□□□ -1.01
PDZRN3-209ENST00000484487 PHRF1Q9P1Y6 1649 aaKnown RBP8.75□□□□□ -1.01
PDZRN3-209ENST00000484487 SPATA31A3Q5VYP0 1347 aa8.75□□□□□ -1.01
PDZRN3-209ENST00000484487 MED1Q15648 1581 aaPredicted RBP8.74□□□□□ -1.01
PDZRN3-209ENST00000484487 XPCQ01831 940 aaPredicted RBP8.74□□□□□ -1.01
PDZRN3-209ENST00000484487 LMOD2Q6P5Q4 547 aa8.74□□□□□ -1.01
PDZRN3-209ENST00000484487 LRRC59Q96AG4 307 aaKnown RBP8.74□□□□□ -1.01
PDZRN3-209ENST00000484487 MRS2Q9HD23 443 aa8.74□□□□□ -1.01
PDZRN3-209ENST00000484487 SLIT3O75094 1523 aa8.74□□□□□ -1.01
PDZRN3-209ENST00000484487 ABCA3Q99758 1704 aa8.74□□□□□ -1.01
PDZRN3-209ENST00000484487 COL16A1Q07092 1604 aaPredicted RBP8.73□□□□□ -1.01
PDZRN3-209ENST00000484487 COL22A1Q8NFW1 1626 aaPredicted RBP8.73□□□□□ -1.01
PDZRN3-209ENST00000484487 TNNT2P45379 298 aaPredicted RBP8.73□□□□□ -1.01
PDZRN3-209ENST00000484487 KIF24Q5T7B8 1368 aa8.73□□□□□ -1.01
PDZRN3-209ENST00000484487 SHPRHQ149N8 1683 aa8.72□□□□□ -1.01
PDZRN3-209ENST00000484487 CD44P16070 742 aaKnown RBP8.72□□□□□ -1.01
PDZRN3-209ENST00000484487 PIP4K2BP78356 416 aa8.72□□□□□ -1.01
PDZRN3-209ENST00000484487 ILDR2Q71H61 639 aa8.72□□□□□ -1.01
PDZRN3-209ENST00000484487 DDX17Q92841 729 aaKnown RBP8.72□□□□□ -1.01
PDZRN3-209ENST00000484487 ZRANB1Q9UGI0 708 aa8.72□□□□□ -1.01
PDZRN3-209ENST00000484487 SMG6Q86US8 1419 aaKnown RBP8.71□□□□□ -1.01
PDZRN3-209ENST00000484487 CDK12Q9NYV4 1490 aaPredicted RBP8.71□□□□□ -1.01
PDZRN3-209ENST00000484487 RGPD5Q99666 1765 aa8.71□□□□□ -1.01
PDZRN3-209ENST00000484487 SOCS7O14512 581 aa8.71□□□□□ -1.02
PDZRN3-209ENST00000484487 MTHFSP49914 203 aa8.71□□□□□ -1.02
PDZRN3-209ENST00000484487 NUTM2GQ5VZR2 741 aa8.71□□□□□ -1.02
PDZRN3-209ENST00000484487 USP19O94966 1318 aa8.71□□□□□ -1.02
PDZRN3-209ENST00000484487 NFAT5O94916 1531 aa8.7□□□□□ -1.02
PDZRN3-209ENST00000484487 FAM208AQ9UK61 1670 aaKnown RBP8.7□□□□□ -1.02
PDZRN3-209ENST00000484487 GCP02774 474 aa8.7□□□□□ -1.02
PDZRN3-209ENST00000484487 POLKQ9UBT6 870 aa8.7□□□□□ -1.02
PDZRN3-209ENST00000484487 NUDCQ9Y266 331 aa8.7□□□□□ -1.02
PDZRN3-209ENST00000484487 INSRP06213 1382 aa8.7□□□□□ -1.02
PDZRN3-209ENST00000484487 ABCC6O95255 1503 aa8.7□□□□□ -1.02
PDZRN3-209ENST00000484487 PEAK1Q9H792 1746 aa8.69□□□□□ -1.02
PDZRN3-209ENST00000484487 AMPHP49418 695 aa8.69□□□□□ -1.02
PDZRN3-209ENST00000484487 HAP1P54257 671 aaPredicted RBP8.69□□□□□ -1.02
PDZRN3-209ENST00000484487 WDR43Q15061 677 aaKnown RBP eCLIP8.69□□□□□ -1.02
PDZRN3-209ENST00000484487 RTL1A6NKG5 1358 aa8.69□□□□□ -1.02
PDZRN3-209ENST00000484487 FLT4P35916 1363 aa8.69□□□□□ -1.02
PDZRN3-209ENST00000484487 PNPLA6Q8IY17 1366 aa8.69□□□□□ -1.02
PDZRN3-209ENST00000484487 PPM1GO15355 546 aaPredicted RBP8.68□□□□□ -1.02
PDZRN3-209ENST00000484487 SOX12O15370 315 aa8.68□□□□□ -1.02
PDZRN3-209ENST00000484487 DIAPH1O60610 1272 aaKnown RBP8.68□□□□□ -1.02
PDZRN3-209ENST00000484487 PNISRQ8TF01 805 aaKnown RBP8.68□□□□□ -1.02
PDZRN3-209ENST00000484487 COL18A1P39060 1754 aa8.68□□□□□ -1.02
PDZRN3-209ENST00000484487 CPDO75976 1380 aa8.67□□□□□ -1.02
PDZRN3-209ENST00000484487 COL3A1P02461 1466 aaPredicted RBP8.67□□□□□ -1.02
PDZRN3-209ENST00000484487 COL14A1Q05707 1796 aaKnown RBP8.67□□□□□ -1.02
PDZRN3-209ENST00000484487 RRS1Q15050 365 aaKnown RBP8.67□□□□□ -1.02
PDZRN3-209ENST00000484487 CCDC184Q52MB2 194 aa8.67□□□□□ -1.02
PDZRN3-209ENST00000484487 MAP3K19Q56UN5 1328 aa8.67□□□□□ -1.02
PDZRN3-209ENST00000484487 PNNQ9H307 717 aaKnown RBP8.67□□□□□ -1.02
PDZRN3-209ENST00000484487 EMILIN1Q9Y6C2 1016 aa8.67□□□□□ -1.02
PDZRN3-209ENST00000484487 RGPD2P0DJD1 1756 aa8.66□□□□□ -1.02
PDZRN3-209ENST00000484487 BLMP54132 1417 aaPredicted RBP8.66□□□□□ -1.02
PDZRN3-209ENST00000484487 JCADQ9P266 1359 aa8.66□□□□□ -1.02
PDZRN3-209ENST00000484487 ARHGEF25Q86VW2 580 aa8.66□□□□□ -1.02
PDZRN3-209ENST00000484487 FAM9BQ8IZU0 186 aa8.66□□□□□ -1.02
PDZRN3-209ENST00000484487 IP6K1Q92551 441 aa8.66□□□□□ -1.02
PDZRN3-209ENST00000484487 RGPD1P0DJD0 1748 aa8.66□□□□□ -1.02
PDZRN3-209ENST00000484487 PLEKHG5O94827 1062 aa8.65□□□□□ -1.02
PDZRN3-209ENST00000484487 FBLN1P23142 703 aa8.65□□□□□ -1.02
PDZRN3-209ENST00000484487 HOXC9P31274 260 aa8.65□□□□□ -1.02
PDZRN3-209ENST00000484487 CABLES1Q8TDN4 633 aa8.65□□□□□ -1.02
PDZRN3-209ENST00000484487 NWD2Q9ULI1 1742 aa8.65□□□□□ -1.03
PDZRN3-209ENST00000484487 ZBTB7CA1YPR0 619 aa8.64□□□□□ -1.03
PDZRN3-209ENST00000484487 ZC3H6P61129 1189 aaKnown RBP8.64□□□□□ -1.03
PDZRN3-209ENST00000484487 PLCH1Q4KWH8 1693 aa8.64□□□□□ -1.03
PDZRN3-209ENST00000484487 LMO7Q8WWI1 1683 aa8.64□□□□□ -1.03
PDZRN3-209ENST00000484487 KIAA0232Q92628 1395 aa8.63□□□□□ -1.03
PDZRN3-209ENST00000484487 SPATA31A6Q5VVP1 1343 aa8.63□□□□□ -1.03
PDZRN3-209ENST00000484487 U2SURPO15042 1029 aaKnown RBP8.63□□□□□ -1.03
PDZRN3-209ENST00000484487 GABBR2O75899 941 aa8.63□□□□□ -1.03
PDZRN3-209ENST00000484487 NEFMP07197 916 aa8.63□□□□□ -1.03
PDZRN3-209ENST00000484487 U2AF1L5P0DN76 240 aaPredicted RBP8.63□□□□□ -1.03
PDZRN3-209ENST00000484487 IL13P35225 146 aa8.63□□□□□ -1.03
PDZRN3-209ENST00000484487 U2AF1Q01081 240 aaKnown RBP eCLIP8.63□□□□□ -1.03
PDZRN3-209ENST00000484487 HSP90AB2PQ58FF8 381 aa8.63□□□□□ -1.03
PDZRN3-209ENST00000484487 PLCD3Q8N3E9 789 aa8.63□□□□□ -1.03
PDZRN3-209ENST00000484487 PRDM11Q9NQV5 511 aa8.63□□□□□ -1.03
PDZRN3-209ENST00000484487 CAMTA1Q9Y6Y1 1673 aa8.62□□□□□ -1.03
PDZRN3-209ENST00000484487 DLG5Q8TDM6 1919 aa8.62□□□□□ -1.03
PDZRN3-209ENST00000484487 FCHSD2O94868 740 aa8.62□□□□□ -1.03
PDZRN3-209ENST00000484487 EIF4A2Q14240 407 aaKnown RBP8.62□□□□□ -1.03
PDZRN3-209ENST00000484487 ADAMTS8Q9UP79 889 aa8.62□□□□□ -1.03
PDZRN3-209ENST00000484487 HSPA1LP34931 641 aa8.61□□□□□ -1.03
PDZRN3-209ENST00000484487 MNX1P50219 401 aaPredicted RBP8.61□□□□□ -1.03
PDZRN3-209ENST00000484487 NGEFQ8N5V2 710 aa8.61□□□□□ -1.03
PDZRN3-209ENST00000484487 VIRMAQ69YN4 1812 aaKnown RBP8.61□□□□□ -1.03
PDZRN3-209ENST00000484487 MAPK8IP3Q9UPT6 1336 aa8.6□□□□□ -1.03
PDZRN3-209ENST00000484487 EVA1CP58658 441 aa8.6□□□□□ -1.03
PDZRN3-209ENST00000484487 ANKRD24Q8TF21 1146 aa8.6□□□□□ -1.03
PDZRN3-209ENST00000484487 RUNDC1Q96C34 613 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms