RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 FAM182BQ5T319 152 aa17.17■□□□□ 0.34
MSH5-216ENST00000484309 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
MSH5-216ENST00000484309 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
MSH5-216ENST00000484309 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
MSH5-216ENST00000484309 ARHGEF25Q86VW2 580 aa17.16■□□□□ 0.34
MSH5-216ENST00000484309 AXIN2Q9Y2T1 843 aa17.16■□□□□ 0.34
MSH5-216ENST00000484309 PARP4Q9UKK3 1724 aaKnown RBP17.16■□□□□ 0.34
MSH5-216ENST00000484309 CRB1P82279 1406 aa17.15■□□□□ 0.34
MSH5-216ENST00000484309 RGPD1P0DJD0 1748 aa17.14■□□□□ 0.33
MSH5-216ENST00000484309 HSPA5P11021 654 aaKnown RBP17.14■□□□□ 0.33
MSH5-216ENST00000484309 POLR3GLQ9BT43 218 aa17.14■□□□□ 0.33
MSH5-216ENST00000484309 CDCA8Q53HL2 280 aa17.13■□□□□ 0.33
MSH5-216ENST00000484309 TCP11L2Q8N4U5 519 aa17.13■□□□□ 0.33
MSH5-216ENST00000484309 LRRC37A3O60309 1634 aa17.13■□□□□ 0.33
MSH5-216ENST00000484309 TNS1Q9HBL0 1735 aaKnown RBP17.13■□□□□ 0.33
MSH5-216ENST00000484309 ABCC6O95255 1503 aa17.12■□□□□ 0.33
MSH5-216ENST00000484309 EIF4G2P78344 907 aaKnown RBP eCLIP17.12■□□□□ 0.33
MSH5-216ENST00000484309 TOM1L2Q6ZVM7 507 aa17.12■□□□□ 0.33
MSH5-216ENST00000484309 BLMP54132 1417 aaPredicted RBP17.12■□□□□ 0.33
MSH5-216ENST00000484309 RGPD2P0DJD1 1756 aa17.11■□□□□ 0.33
MSH5-216ENST00000484309 WDR17Q8IZU2 1322 aa17.11■□□□□ 0.33
MSH5-216ENST00000484309 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
MSH5-216ENST00000484309 BARGINQ6ZT62 677 aa17.1■□□□□ 0.33
MSH5-216ENST00000484309 FBLN1P23142 703 aa17.09■□□□□ 0.33
MSH5-216ENST00000484309 COG3Q96JB2 828 aa17.09■□□□□ 0.33
MSH5-216ENST00000484309 NSD3Q9BZ95 1437 aa17.08■□□□□ 0.32
MSH5-216ENST00000484309 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.32
MSH5-216ENST00000484309 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.32
MSH5-216ENST00000484309 CCDC125Q86Z20 511 aa17.07■□□□□ 0.32
MSH5-216ENST00000484309 THRAP3Q9Y2W1 955 aaKnown RBP17.07■□□□□ 0.32
MSH5-216ENST00000484309 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
MSH5-216ENST00000484309 FAM208AQ9UK61 1670 aaKnown RBP17.07■□□□□ 0.32
MSH5-216ENST00000484309 FYB1O15117 783 aa17.06■□□□□ 0.32
MSH5-216ENST00000484309 PDE3BQ13370 1112 aa17.06■□□□□ 0.32
MSH5-216ENST00000484309 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
MSH5-216ENST00000484309 CARD14Q9BXL6 1004 aa17.06■□□□□ 0.32
MSH5-216ENST00000484309 ANKRD26Q9UPS8 1709 aa17.06■□□□□ 0.32
MSH5-216ENST00000484309 PEAK1Q9H792 1746 aa17.05■□□□□ 0.32
MSH5-216ENST00000484309 ERBB3P21860 1342 aa17.04■□□□□ 0.32
MSH5-216ENST00000484309 MAP2P11137 1827 aaKnown RBP17.04■□□□□ 0.32
MSH5-216ENST00000484309 MAP3K19Q56UN5 1328 aa17.03■□□□□ 0.32
MSH5-216ENST00000484309 ANKRD24Q8TF21 1146 aa17.03■□□□□ 0.32
MSH5-216ENST00000484309 LTV1Q96GA3 475 aaPredicted RBP17.03■□□□□ 0.32
MSH5-216ENST00000484309 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
MSH5-216ENST00000484309 NLRP2Q9NX02 1062 aa17.03■□□□□ 0.32
MSH5-216ENST00000484309 KAT6BQ8WYB5 2073 aa17.02■□□□□ 0.32
MSH5-216ENST00000484309 RRS1Q15050 365 aaKnown RBP17.02■□□□□ 0.32
MSH5-216ENST00000484309 DISP2A7MBM2 1401 aa17.02■□□□□ 0.31
MSH5-216ENST00000484309 CCDC7Q96M83 1385 aa17.02■□□□□ 0.31
MSH5-216ENST00000484309 C11orf95C9JLR9 678 aaPredicted RBP17.01■□□□□ 0.31
MSH5-216ENST00000484309 TRIM37O94972 964 aa17.01■□□□□ 0.31
MSH5-216ENST00000484309 AMPHP49418 695 aa17.01■□□□□ 0.31
MSH5-216ENST00000484309 DDB1Q16531 1140 aa17.01■□□□□ 0.31
MSH5-216ENST00000484309 FAM196AQ6ZSG2 479 aa17.01■□□□□ 0.31
MSH5-216ENST00000484309 IP6K1Q92551 441 aa17■□□□□ 0.31
MSH5-216ENST00000484309 HOXC9P31274 260 aa16.99■□□□□ 0.31
MSH5-216ENST00000484309 BAG6P46379 1132 aa16.99■□□□□ 0.31
MSH5-216ENST00000484309 OVOS2A0A0G2JMS6 1433 aa16.98■□□□□ 0.31
MSH5-216ENST00000484309 EN1Q05925 392 aaPredicted RBP16.98■□□□□ 0.31
MSH5-216ENST00000484309 CDCA7Q9BWT1 371 aaPredicted RBP16.97■□□□□ 0.31
MSH5-216ENST00000484309 RTL1A6NKG5 1358 aa16.97■□□□□ 0.31
MSH5-216ENST00000484309 TNS2Q63HR2 1409 aa16.96■□□□□ 0.31
MSH5-216ENST00000484309 MARCH10Q8NA82 808 aaPredicted RBP16.96■□□□□ 0.31
MSH5-216ENST00000484309 PANK3Q9H999 370 aa16.96■□□□□ 0.31
MSH5-216ENST00000484309 RREB1Q92766 1687 aa16.96■□□□□ 0.31
MSH5-216ENST00000484309 CGNL1Q0VF96 1302 aa16.96■□□□□ 0.3
MSH5-216ENST00000484309 NUP188Q5SRE5 1749 aa16.95■□□□□ 0.3
MSH5-216ENST00000484309 SHANK3Q9BYB0 1731 aa16.95■□□□□ 0.3
MSH5-216ENST00000484309 APBA3O96018 575 aa16.94■□□□□ 0.3
MSH5-216ENST00000484309 IL2RBP14784 551 aa16.94■□□□□ 0.3
MSH5-216ENST00000484309 EMILIN1Q9Y6C2 1016 aa16.94■□□□□ 0.3
MSH5-216ENST00000484309 KIF7Q2M1P5 1343 aa16.94■□□□□ 0.3
MSH5-216ENST00000484309 EXOC5O00471 708 aa16.93■□□□□ 0.3
MSH5-216ENST00000484309 EZH2Q15910 746 aaKnown RBP16.93■□□□□ 0.3
MSH5-216ENST00000484309 FLT4P35916 1363 aa16.92■□□□□ 0.3
MSH5-216ENST00000484309 NHSQ6T4R5 1651 aa16.92■□□□□ 0.3
MSH5-216ENST00000484309 TNNT2P45379 298 aaPredicted RBP16.92■□□□□ 0.3
MSH5-216ENST00000484309 HSP90AB2PQ58FF8 381 aa16.92■□□□□ 0.3
MSH5-216ENST00000484309 USHBP1Q8N6Y0 703 aa16.92■□□□□ 0.3
MSH5-216ENST00000484309 SMG6Q86US8 1419 aaKnown RBP16.91■□□□□ 0.3
MSH5-216ENST00000484309 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
MSH5-216ENST00000484309 PTF1AQ7RTS3 328 aa16.91■□□□□ 0.3
MSH5-216ENST00000484309 RGPD3A6NKT7 1758 aaPredicted RBP16.91■□□□□ 0.3
MSH5-216ENST00000484309 RGPD4Q7Z3J3 1758 aa16.91■□□□□ 0.3
MSH5-216ENST00000484309 MEGF6O75095 1541 aa16.9■□□□□ 0.3
MSH5-216ENST00000484309 DOT1LQ8TEK3 1739 aa16.9■□□□□ 0.3
MSH5-216ENST00000484309 INSRP06213 1382 aa16.89■□□□□ 0.3
MSH5-216ENST00000484309 BTAF1O14981 1849 aa16.89■□□□□ 0.29
MSH5-216ENST00000484309 PSDA5PKW4 1024 aaPredicted RBP16.89■□□□□ 0.29
MSH5-216ENST00000484309 NBPF6Q5VWK0 638 aa16.89■□□□□ 0.29
MSH5-216ENST00000484309 NBPF4Q96M43 638 aa16.89■□□□□ 0.29
MSH5-216ENST00000484309 CAMKK2Q96RR4 588 aa16.89■□□□□ 0.29
MSH5-216ENST00000484309 ACSBG1Q96GR2 724 aa16.87■□□□□ 0.29
MSH5-216ENST00000484309 KIF24Q5T7B8 1368 aa16.87■□□□□ 0.29
MSH5-216ENST00000484309 BCL9O00512 1426 aa16.86■□□□□ 0.29
MSH5-216ENST00000484309 DDX54Q8TDD1 881 aaKnown RBP16.85■□□□□ 0.29
MSH5-216ENST00000484309 POLKQ9UBT6 870 aa16.85■□□□□ 0.29
MSH5-216ENST00000484309 KNSTRNQ9Y448 316 aa16.85■□□□□ 0.29
MSH5-216ENST00000484309 NSD2O96028 1365 aa16.85■□□□□ 0.29
MSH5-216ENST00000484309 KCNQ2O43526 872 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms