RNA–Protein interactions for RNA: ENST00000484078.5

SUPT20H-217, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 1,876 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-217ENST00000484078 MAP3K1Q13233 1512 aa8.56□□□□□ -1.04
SUPT20H-217ENST00000484078 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.55□□□□□ -1.04
SUPT20H-217ENST00000484078 PER1O15534 1290 aaPredicted RBP8.55□□□□□ -1.04
SUPT20H-217ENST00000484078 RFX1P22670 979 aa8.55□□□□□ -1.04
SUPT20H-217ENST00000484078 MTMR2Q13614 643 aa8.55□□□□□ -1.04
SUPT20H-217ENST00000484078 SAMD7Q7Z3H4 446 aa8.55□□□□□ -1.04
SUPT20H-217ENST00000484078 CFDP1Q9UEE9 299 aaPredicted RBP8.55□□□□□ -1.04
SUPT20H-217ENST00000484078 POGZQ7Z3K3 1410 aa8.55□□□□□ -1.04
SUPT20H-217ENST00000484078 CFAP70Q5T0N1 1121 aa8.55□□□□□ -1.04
SUPT20H-217ENST00000484078 RABGEF1Q9UJ41 708 aa8.55□□□□□ -1.04
SUPT20H-217ENST00000484078 KANK4Q5T7N3 995 aaPredicted RBP8.54□□□□□ -1.04
SUPT20H-217ENST00000484078 AFAP1Q8N556 730 aa8.54□□□□□ -1.04
SUPT20H-217ENST00000484078 LRRC9Q6ZRR7 1453 aa8.54□□□□□ -1.04
SUPT20H-217ENST00000484078 ITSN2Q9NZM3 1697 aa8.54□□□□□ -1.04
SUPT20H-217ENST00000484078 MAGI2Q86UL8 1455 aa8.53□□□□□ -1.04
SUPT20H-217ENST00000484078 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
SUPT20H-217ENST00000484078 VARS2Q5ST30 1063 aaKnown RBP8.53□□□□□ -1.04
SUPT20H-217ENST00000484078 ZMYM4Q5VZL5 1548 aa8.53□□□□□ -1.04
SUPT20H-217ENST00000484078 NCOA2Q15596 1464 aa8.53□□□□□ -1.04
SUPT20H-217ENST00000484078 ZNF518AQ6AHZ1 1483 aa8.53□□□□□ -1.04
SUPT20H-217ENST00000484078 ABCC1P33527 1531 aa8.53□□□□□ -1.04
SUPT20H-217ENST00000484078 CFHP08603 1231 aa8.53□□□□□ -1.04
SUPT20H-217ENST00000484078 SRPK2P78362 688 aaKnown RBP8.53□□□□□ -1.04
SUPT20H-217ENST00000484078 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
SUPT20H-217ENST00000484078 MYT1LQ9UL68 1186 aa8.53□□□□□ -1.04
SUPT20H-217ENST00000484078 ARHGEF12Q9NZN5 1544 aa8.52□□□□□ -1.05
SUPT20H-217ENST00000484078 SAMD9LQ8IVG5 1584 aa8.52□□□□□ -1.05
SUPT20H-217ENST00000484078 HNRNPMP52272 730 aaKnown RBP eCLIP8.52□□□□□ -1.05
SUPT20H-217ENST00000484078 KCTD17Q8N5Z5 321 aa8.52□□□□□ -1.05
SUPT20H-217ENST00000484078 TRAPPC8Q9Y2L5 1435 aa8.52□□□□□ -1.05
SUPT20H-217ENST00000484078 PLEKHH2Q8IVE3 1493 aa8.52□□□□□ -1.05
SUPT20H-217ENST00000484078 ZFYVE16Q7Z3T8 1539 aa8.52□□□□□ -1.05
SUPT20H-217ENST00000484078 ARHGEF40Q8TER5 1519 aa8.52□□□□□ -1.05
SUPT20H-217ENST00000484078 NR6A1Q15406 480 aa8.51□□□□□ -1.05
SUPT20H-217ENST00000484078 PUS10Q3MIT2 529 aaKnown RBP8.51□□□□□ -1.05
SUPT20H-217ENST00000484078 NPM2Q86SE8 214 aaKnown RBP8.51□□□□□ -1.05
SUPT20H-217ENST00000484078 ARID4BQ4LE39 1312 aaPredicted RBP8.51□□□□□ -1.05
SUPT20H-217ENST00000484078 YEATS2Q9ULM3 1422 aa8.51□□□□□ -1.05
SUPT20H-217ENST00000484078 ARHGAP33O14559 1287 aa8.51□□□□□ -1.05
SUPT20H-217ENST00000484078 RNF40O75150 1001 aa8.51□□□□□ -1.05
SUPT20H-217ENST00000484078 VPS9D1Q9Y2B5 631 aa8.51□□□□□ -1.05
SUPT20H-217ENST00000484078 KIAA1107Q9UPP5 1409 aa8.51□□□□□ -1.05
SUPT20H-217ENST00000484078 KDM5CP41229 1560 aa8.5□□□□□ -1.05
SUPT20H-217ENST00000484078 FAM98CQ17RN3 349 aaKnown RBP8.5□□□□□ -1.05
SUPT20H-217ENST00000484078 WWC1Q8IX03 1113 aa8.5□□□□□ -1.05
SUPT20H-217ENST00000484078 PRR7Q8TB68 274 aa8.5□□□□□ -1.05
SUPT20H-217ENST00000484078 ZNF644Q9H582 1327 aaPredicted RBP8.5□□□□□ -1.05
SUPT20H-217ENST00000484078 ATP10AO60312 1499 aa8.5□□□□□ -1.05
SUPT20H-217ENST00000484078 SYCP2Q9BX26 1530 aa8.49□□□□□ -1.05
SUPT20H-217ENST00000484078 MLH3Q9UHC1 1453 aa8.49□□□□□ -1.05
SUPT20H-217ENST00000484078 EMP3P54852 163 aa8.49□□□□□ -1.05
SUPT20H-217ENST00000484078 HELBQ8NG08 1087 aaPredicted RBP8.49□□□□□ -1.05
SUPT20H-217ENST00000484078 ALG2Q9H553 416 aa8.49□□□□□ -1.05
SUPT20H-217ENST00000484078 PRM3Q9NNZ6 103 aa8.49□□□□□ -1.05
SUPT20H-217ENST00000484078 PPP1R12CQ9BZL4 782 aa8.49□□□□□ -1.05
SUPT20H-217ENST00000484078 SPAG9O60271 1321 aaKnown RBP8.48□□□□□ -1.05
SUPT20H-217ENST00000484078 MARVELD3Q96A59 401 aa8.48□□□□□ -1.05
SUPT20H-217ENST00000484078 KIDINS220Q9ULH0 1771 aa8.48□□□□□ -1.05
SUPT20H-217ENST00000484078 BCORL1Q5H9F3 1711 aa8.48□□□□□ -1.05
SUPT20H-217ENST00000484078 RSPH4AQ5TD94 716 aa8.47□□□□□ -1.05
SUPT20H-217ENST00000484078 PBXIP1Q96AQ6 731 aa8.47□□□□□ -1.05
SUPT20H-217ENST00000484078 C9orf84Q5VXU9 1444 aa8.47□□□□□ -1.05
SUPT20H-217ENST00000484078 ADAMTSL3P82987 1691 aa8.47□□□□□ -1.05
SUPT20H-217ENST00000484078 ERBB3P21860 1342 aa8.47□□□□□ -1.05
SUPT20H-217ENST00000484078 PALM3A6NDB9 673 aaPredicted RBP8.47□□□□□ -1.05
SUPT20H-217ENST00000484078 PPP1R15AO75807 674 aaPredicted RBP8.47□□□□□ -1.05
SUPT20H-217ENST00000484078 ATP6V1AP38606 617 aa8.47□□□□□ -1.05
SUPT20H-217ENST00000484078 CCDC9Q9Y3X0 531 aaKnown RBP8.47□□□□□ -1.05
SUPT20H-217ENST00000484078 SIGLEC1Q9BZZ2 1709 aa8.46□□□□□ -1.05
SUPT20H-217ENST00000484078 DIP2CQ9Y2E4 1556 aa8.46□□□□□ -1.06
SUPT20H-217ENST00000484078 BHMG1C9JSJ3 638 aaPredicted RBP8.46□□□□□ -1.06
SUPT20H-217ENST00000484078 MLECQ14165 292 aa8.46□□□□□ -1.06
SUPT20H-217ENST00000484078 CDCA8Q53HL2 280 aa8.46□□□□□ -1.06
SUPT20H-217ENST00000484078 RNF19BQ6ZMZ0 732 aa8.46□□□□□ -1.06
SUPT20H-217ENST00000484078 SLC4A5Q9BY07 1137 aa8.46□□□□□ -1.06
SUPT20H-217ENST00000484078 SLC27A5Q9Y2P5 690 aa8.46□□□□□ -1.06
SUPT20H-217ENST00000484078 CAMSAP2Q08AD1 1489 aa8.46□□□□□ -1.06
SUPT20H-217ENST00000484078 MBD5Q9P267 1494 aa8.46□□□□□ -1.06
SUPT20H-217ENST00000484078 MYOM3Q5VTT5 1437 aa8.46□□□□□ -1.06
SUPT20H-217ENST00000484078 ABCA6Q8N139 1617 aa8.46□□□□□ -1.06
SUPT20H-217ENST00000484078 POTEB3A0JP26 581 aa8.45□□□□□ -1.06
SUPT20H-217ENST00000484078 WASHC4Q2M389 1173 aa8.45□□□□□ -1.06
SUPT20H-217ENST00000484078 POTEBQ6S5H4 581 aa8.45□□□□□ -1.06
SUPT20H-217ENST00000484078 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
SUPT20H-217ENST00000484078 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
SUPT20H-217ENST00000484078 TFIP11Q9UBB9 837 aaKnown RBP8.45□□□□□ -1.06
SUPT20H-217ENST00000484078 MIA2Q96PC5 1412 aa8.45□□□□□ -1.06
SUPT20H-217ENST00000484078 MORN1Q5T089 497 aa8.45□□□□□ -1.06
SUPT20H-217ENST00000484078 BLOC1S3Q6QNY0 202 aa8.45□□□□□ -1.06
SUPT20H-217ENST00000484078 SLF2Q8IX21 1173 aa8.45□□□□□ -1.06
SUPT20H-217ENST00000484078 ZFRQ96KR1 1074 aaKnown RBP8.45□□□□□ -1.06
SUPT20H-217ENST00000484078 ATP7AQ04656 1500 aa8.44□□□□□ -1.06
SUPT20H-217ENST00000484078 TSPY4P0CV99 314 aa8.44□□□□□ -1.06
SUPT20H-217ENST00000484078 TSPY10P0CW01 314 aa8.44□□□□□ -1.06
SUPT20H-217ENST00000484078 GZF1Q9H116 711 aaPredicted RBP8.44□□□□□ -1.06
SUPT20H-217ENST00000484078 REREQ9P2R6 1566 aa8.44□□□□□ -1.06
SUPT20H-217ENST00000484078 CCDC141Q6ZP82 1450 aa8.43□□□□□ -1.06
SUPT20H-217ENST00000484078 RTEL1-TNFRSF6BF6WH68 1400 aa8.43□□□□□ -1.06
SUPT20H-217ENST00000484078 LMOD1P29536 600 aaPredicted RBP8.43□□□□□ -1.06
SUPT20H-217ENST00000484078 MADDQ8WXG6 1647 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms