RNA–Protein interactions for RNA: ENST00000483489.1

LRPPRC-209, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 2

Gene LRPPRC, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-209ENST00000483489 PPP1R12CQ9BZL4 782 aa8.66□□□□□ -1.02
LRPPRC-209ENST00000483489 TBC1D9Q6ZT07 1266 aa8.65□□□□□ -1.02
LRPPRC-209ENST00000483489 NFATC2IPQ8NCF5 419 aa8.65□□□□□ -1.02
LRPPRC-209ENST00000483489 CCDC97Q96F63 343 aaPredicted RBP8.65□□□□□ -1.02
LRPPRC-209ENST00000483489 PALM3A6NDB9 673 aaPredicted RBP8.64□□□□□ -1.03
LRPPRC-209ENST00000483489 FOXC1Q12948 553 aa8.64□□□□□ -1.03
LRPPRC-209ENST00000483489 TSGA10IPQ3SY00 556 aa8.64□□□□□ -1.03
LRPPRC-209ENST00000483489 CFAP70Q5T0N1 1121 aa8.64□□□□□ -1.03
LRPPRC-209ENST00000483489 KCTD15Q96SI1 283 aaPredicted RBP8.64□□□□□ -1.03
LRPPRC-209ENST00000483489 TFIP11Q9UBB9 837 aaKnown RBP8.64□□□□□ -1.03
LRPPRC-209ENST00000483489 TLL2Q9Y6L7 1015 aa8.64□□□□□ -1.03
LRPPRC-209ENST00000483489 NBPF20Q3BBV1 942 aa8.63□□□□□ -1.03
LRPPRC-209ENST00000483489 VASH1Q7L8A9 365 aaPredicted RBP8.63□□□□□ -1.03
LRPPRC-209ENST00000483489 SEPT12Q8IYM1 358 aa8.63□□□□□ -1.03
LRPPRC-209ENST00000483489 TOR4AQ9NXH8 423 aa8.63□□□□□ -1.03
LRPPRC-209ENST00000483489 ATP9BO43861 1147 aa8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 SRPK2P78362 688 aaKnown RBP8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 PRR20EP86478 221 aa8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 PRR20CP86479 221 aa8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 PRR20DP86480 221 aa8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 PRR20BP86481 221 aa8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 PRR20AP86496 221 aa8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 SLFNL1Q499Z3 407 aa8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 INTS6LQ5JSJ4 861 aaKnown RBP8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 TRAF7Q6Q0C0 670 aa8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 CCDC85AQ96PX6 553 aaPredicted RBP8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 ARID3AQ99856 593 aa8.62□□□□□ -1.03
LRPPRC-209ENST00000483489 ADH1CP00326 375 aa8.61□□□□□ -1.03
LRPPRC-209ENST00000483489 ARID5BQ14865 1188 aa8.61□□□□□ -1.03
LRPPRC-209ENST00000483489 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
LRPPRC-209ENST00000483489 CCDC125Q86Z20 511 aa8.61□□□□□ -1.03
LRPPRC-209ENST00000483489 RNF135Q8IUD6 432 aa8.61□□□□□ -1.03
LRPPRC-209ENST00000483489 SNIP1Q8TAD8 396 aaKnown RBP8.61□□□□□ -1.03
LRPPRC-209ENST00000483489 MAFBQ9Y5Q3 323 aaPredicted RBP8.61□□□□□ -1.03
LRPPRC-209ENST00000483489 SKIP12755 728 aa8.6□□□□□ -1.03
LRPPRC-209ENST00000483489 NR5A1Q13285 461 aa8.6□□□□□ -1.03
LRPPRC-209ENST00000483489 PLPP7Q8NBV4 271 aa8.6□□□□□ -1.03
LRPPRC-209ENST00000483489 MAP7D1Q3KQU3 841 aa8.59□□□□□ -1.03
LRPPRC-209ENST00000483489 PLEKHM2Q8IWE5 1019 aa8.59□□□□□ -1.03
LRPPRC-209ENST00000483489 J3QL48 77 aa8.58□□□□□ -1.04
LRPPRC-209ENST00000483489 ERVH48-1M5A8F1 160 aa8.58□□□□□ -1.04
LRPPRC-209ENST00000483489 TNFRSF10AO00220 468 aa8.58□□□□□ -1.04
LRPPRC-209ENST00000483489 ALDH1A1P00352 501 aa8.58□□□□□ -1.04
LRPPRC-209ENST00000483489 LMOD1P29536 600 aaPredicted RBP8.58□□□□□ -1.04
LRPPRC-209ENST00000483489 CDCA7Q9BWT1 371 aaPredicted RBP8.58□□□□□ -1.04
LRPPRC-209ENST00000483489 USP17L5A8MUK1 530 aa8.57□□□□□ -1.04
LRPPRC-209ENST00000483489 LZTS3O60299 673 aaPredicted RBP8.57□□□□□ -1.04
LRPPRC-209ENST00000483489 NR3C2P08235 984 aa8.57□□□□□ -1.04
LRPPRC-209ENST00000483489 FSHRP23945 695 aa8.57□□□□□ -1.04
LRPPRC-209ENST00000483489 CYP4X1Q8N118 509 aa8.57□□□□□ -1.04
LRPPRC-209ENST00000483489 USP17L3A6NCW0 530 aa8.56□□□□□ -1.04
LRPPRC-209ENST00000483489 USP17L4A6NCW7 530 aa8.56□□□□□ -1.04
LRPPRC-209ENST00000483489 SMPD1P17405 629 aa8.56□□□□□ -1.04
LRPPRC-209ENST00000483489 KANK4Q5T7N3 995 aaPredicted RBP8.56□□□□□ -1.04
LRPPRC-209ENST00000483489 USP17L2Q6R6M4 530 aa8.56□□□□□ -1.04
LRPPRC-209ENST00000483489 USP17L1Q7RTZ2 530 aa8.56□□□□□ -1.04
LRPPRC-209ENST00000483489 TTC24A2A3L6 582 aaPredicted RBP8.55□□□□□ -1.04
LRPPRC-209ENST00000483489 RFX1P22670 979 aa8.55□□□□□ -1.04
LRPPRC-209ENST00000483489 CCDC116Q8IYX3 515 aa8.55□□□□□ -1.04
LRPPRC-209ENST00000483489 DEPDC4Q8N2C3 294 aa8.55□□□□□ -1.04
LRPPRC-209ENST00000483489 KLF16Q9BXK1 252 aaPredicted RBP8.55□□□□□ -1.04
LRPPRC-209ENST00000483489 DOLKQ9UPQ8 538 aa8.55□□□□□ -1.04
LRPPRC-209ENST00000483489 PCDHB11Q9Y5F2 797 aa8.55□□□□□ -1.04
LRPPRC-209ENST00000483489 RAB15P59190 212 aa8.54□□□□□ -1.04
LRPPRC-209ENST00000483489 DHX9Q08211 1270 aaKnown RBP8.54□□□□□ -1.04
LRPPRC-209ENST00000483489 NNTQ13423 1086 aa8.54□□□□□ -1.04
LRPPRC-209ENST00000483489 NCOA4Q13772 614 aa8.54□□□□□ -1.04
LRPPRC-209ENST00000483489 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
LRPPRC-209ENST00000483489 TMPRSS4Q9NRS4 437 aa8.54□□□□□ -1.04
LRPPRC-209ENST00000483489 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.53□□□□□ -1.04
LRPPRC-209ENST00000483489 LILRA1O75019 489 aa8.53□□□□□ -1.04
LRPPRC-209ENST00000483489 PPP1R15AO75807 674 aaPredicted RBP8.53□□□□□ -1.04
LRPPRC-209ENST00000483489 PBXIP1Q96AQ6 731 aa8.53□□□□□ -1.04
LRPPRC-209ENST00000483489 WASF2Q9Y6W5 498 aa8.53□□□□□ -1.04
LRPPRC-209ENST00000483489 ERVK-9P63128 1117 aa8.52□□□□□ -1.05
LRPPRC-209ENST00000483489 MKRN1Q9UHC7 482 aaKnown RBP8.52□□□□□ -1.05
LRPPRC-209ENST00000483489 PDZRN3Q9UPQ7 1066 aa8.52□□□□□ -1.05
LRPPRC-209ENST00000483489 SCTRP47872 440 aa8.51□□□□□ -1.05
LRPPRC-209ENST00000483489 USP4Q13107 963 aa8.51□□□□□ -1.05
LRPPRC-209ENST00000483489 EML3Q32P44 896 aa8.51□□□□□ -1.05
LRPPRC-209ENST00000483489 OXLD1Q5BKU9 147 aa8.51□□□□□ -1.05
LRPPRC-209ENST00000483489 ZNF784Q8NCA9 323 aaPredicted RBP8.51□□□□□ -1.05
LRPPRC-209ENST00000483489 VRTNQ9H8Y1 702 aa8.51□□□□□ -1.05
LRPPRC-209ENST00000483489 EMILIN1Q9Y6C2 1016 aa8.51□□□□□ -1.05
LRPPRC-209ENST00000483489 ZBTB7BO15156 539 aaPredicted RBP8.5□□□□□ -1.05
LRPPRC-209ENST00000483489 ADD1P35611 737 aaKnown RBP8.5□□□□□ -1.05
LRPPRC-209ENST00000483489 CDCA8Q53HL2 280 aa8.5□□□□□ -1.05
LRPPRC-209ENST00000483489 CC2D2BQ6DHV5 1058 aa8.5□□□□□ -1.05
LRPPRC-209ENST00000483489 HPS1Q92902 700 aa8.5□□□□□ -1.05
LRPPRC-209ENST00000483489 PCDHGA11Q9Y5H2 935 aa8.5□□□□□ -1.05
LRPPRC-209ENST00000483489 ATP5J2-PTCD1G3V325 749 aa8.49□□□□□ -1.05
LRPPRC-209ENST00000483489 TIMP2P16035 220 aa8.49□□□□□ -1.05
LRPPRC-209ENST00000483489 MYT1Q01538 1121 aa8.49□□□□□ -1.05
LRPPRC-209ENST00000483489 HOMEZQ8IX15 550 aa8.49□□□□□ -1.05
LRPPRC-209ENST00000483489 SIRT1Q96EB6 747 aa8.49□□□□□ -1.05
LRPPRC-209ENST00000483489 OSBPL3Q9H4L5 887 aa8.49□□□□□ -1.05
LRPPRC-209ENST00000483489 NOD1Q9Y239 953 aa8.49□□□□□ -1.05
LRPPRC-209ENST00000483489 DKK1O94907 266 aa8.48□□□□□ -1.05
LRPPRC-209ENST00000483489 ATG7O95352 703 aa8.48□□□□□ -1.05
LRPPRC-209ENST00000483489 ITPKCQ96DU7 683 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms