RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 GPSM3Q9Y4H4 160 aa11.17□□□□□ -0.62
PMS1-219ENST00000483293 RC3H1Q5TC82 1133 aaKnown RBP11.16□□□□□ -0.62
PMS1-219ENST00000483293 DZIP3Q86Y13 1208 aaKnown RBP11.16□□□□□ -0.62
PMS1-219ENST00000483293 CCDC82Q8N4S0 544 aa11.16□□□□□ -0.62
PMS1-219ENST00000483293 FOXC1Q12948 553 aa11.15□□□□□ -0.62
PMS1-219ENST00000483293 ERFEQ4G0M1 354 aa11.15□□□□□ -0.62
PMS1-219ENST00000483293 SH3RF1Q7Z6J0 888 aa11.15□□□□□ -0.62
PMS1-219ENST00000483293 EHBP1Q8NDI1 1231 aa11.15□□□□□ -0.62
PMS1-219ENST00000483293 ALG2Q9H553 416 aa11.15□□□□□ -0.62
PMS1-219ENST00000483293 ARID5BQ14865 1188 aa11.14□□□□□ -0.63
PMS1-219ENST00000483293 WNT7BP56706 349 aa11.13□□□□□ -0.63
PMS1-219ENST00000483293 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
PMS1-219ENST00000483293 CCDC97Q96F63 343 aaPredicted RBP11.12□□□□□ -0.63
PMS1-219ENST00000483293 GMPR2Q9P2T1 348 aaKnown RBP11.12□□□□□ -0.63
PMS1-219ENST00000483293 RAB15P59190 212 aa11.11□□□□□ -0.63
PMS1-219ENST00000483293 FAM174AQ8TBP5 190 aa11.1□□□□□ -0.63
PMS1-219ENST00000483293 SLC10A4Q96EP9 437 aa11.1□□□□□ -0.63
PMS1-219ENST00000483293 PIK3CDO00329 1044 aa11.09□□□□□ -0.63
PMS1-219ENST00000483293 RFX1P22670 979 aa11.09□□□□□ -0.63
PMS1-219ENST00000483293 VARSP26640 1264 aaKnown RBP11.09□□□□□ -0.63
PMS1-219ENST00000483293 SOX11P35716 441 aa11.09□□□□□ -0.63
PMS1-219ENST00000483293 MRGPRX2Q96LB1 330 aa11.09□□□□□ -0.63
PMS1-219ENST00000483293 CEP126Q9P2H0 1117 aa11.09□□□□□ -0.63
PMS1-219ENST00000483293 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
PMS1-219ENST00000483293 TLL2Q9Y6L7 1015 aa11.08□□□□□ -0.64
PMS1-219ENST00000483293 GIGYF1O75420 1035 aaPredicted RBP11.07□□□□□ -0.64
PMS1-219ENST00000483293 C1QTNF2Q9BXJ5 285 aa11.07□□□□□ -0.64
PMS1-219ENST00000483293 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
PMS1-219ENST00000483293 TBC1D9Q6ZT07 1266 aa11.06□□□□□ -0.64
PMS1-219ENST00000483293 VASH1Q7L8A9 365 aaPredicted RBP11.06□□□□□ -0.64
PMS1-219ENST00000483293 UCN2Q96RP3 112 aa11.06□□□□□ -0.64
PMS1-219ENST00000483293 TFIP11Q9UBB9 837 aaKnown RBP11.06□□□□□ -0.64
PMS1-219ENST00000483293 SERPINA10Q9UK55 444 aa11.06□□□□□ -0.64
PMS1-219ENST00000483293 WNT7AO00755 349 aa11.05□□□□□ -0.64
PMS1-219ENST00000483293 TSGA10IPQ3SY00 556 aa11.05□□□□□ -0.64
PMS1-219ENST00000483293 PKD2L1Q9P0L9 805 aa11.05□□□□□ -0.64
PMS1-219ENST00000483293 SKIP12755 728 aa11.04□□□□□ -0.64
PMS1-219ENST00000483293 RNF135Q8IUD6 432 aa11.04□□□□□ -0.64
PMS1-219ENST00000483293 SIAH2O43255 324 aa11.03□□□□□ -0.64
PMS1-219ENST00000483293 AVPP01185 164 aa11.03□□□□□ -0.64
PMS1-219ENST00000483293 KCTD15Q96SI1 283 aaPredicted RBP11.03□□□□□ -0.64
PMS1-219ENST00000483293 PPP1R12CQ9BZL4 782 aa11.03□□□□□ -0.64
PMS1-219ENST00000483293 PALM3A6NDB9 673 aaPredicted RBP11.02□□□□□ -0.65
PMS1-219ENST00000483293 ALDH1A1P00352 501 aa11.02□□□□□ -0.65
PMS1-219ENST00000483293 LMOD1P29536 600 aaPredicted RBP11.02□□□□□ -0.65
PMS1-219ENST00000483293 MCCD1P59942 119 aaPredicted RBP11.02□□□□□ -0.65
PMS1-219ENST00000483293 CDCA8Q53HL2 280 aa11.02□□□□□ -0.65
PMS1-219ENST00000483293 TRMT44Q8IYL2 757 aaKnown RBP11.02□□□□□ -0.65
PMS1-219ENST00000483293 DEPDC4Q8N2C3 294 aa11.02□□□□□ -0.65
PMS1-219ENST00000483293 NBPF20Q3BBV1 942 aa11□□□□□ -0.65
PMS1-219ENST00000483293 ZNF592Q92610 1267 aa11□□□□□ -0.65
PMS1-219ENST00000483293 TTC24A2A3L6 582 aaPredicted RBP10.99□□□□□ -0.65
PMS1-219ENST00000483293 FSHRP23945 695 aa10.99□□□□□ -0.65
PMS1-219ENST00000483293 GRM5P41594 1212 aa10.99□□□□□ -0.65
PMS1-219ENST00000483293 PHTF2Q8N3S3 785 aa10.99□□□□□ -0.65
PMS1-219ENST00000483293 CCDC85AQ96PX6 553 aaPredicted RBP10.99□□□□□ -0.65
PMS1-219ENST00000483293 AXIN1O15169 862 aa10.98□□□□□ -0.65
PMS1-219ENST00000483293 SUZ12Q15022 739 aaKnown RBP10.98□□□□□ -0.65
PMS1-219ENST00000483293 INTS6LQ5JSJ4 861 aaKnown RBP10.98□□□□□ -0.65
PMS1-219ENST00000483293 CYP4X1Q8N118 509 aa10.98□□□□□ -0.65
PMS1-219ENST00000483293 ATP9BO43861 1147 aa10.97□□□□□ -0.65
PMS1-219ENST00000483293 CFAP70Q5T0N1 1121 aa10.97□□□□□ -0.65
PMS1-219ENST00000483293 PLPP7Q8NBV4 271 aa10.97□□□□□ -0.65
PMS1-219ENST00000483293 CDK15Q96Q40 435 aa10.97□□□□□ -0.65
PMS1-219ENST00000483293 CDCA7Q9BWT1 371 aaPredicted RBP10.97□□□□□ -0.65
PMS1-219ENST00000483293 CDV3Q9UKY7 258 aaKnown RBP10.97□□□□□ -0.65
PMS1-219ENST00000483293 PCDHB11Q9Y5F2 797 aa10.97□□□□□ -0.65
PMS1-219ENST00000483293 ESPNB1AK53 854 aa10.96□□□□□ -0.65
PMS1-219ENST00000483293 J3QL48 77 aa10.96□□□□□ -0.65
PMS1-219ENST00000483293 TERTO14746 1132 aaKnown RBP10.96□□□□□ -0.65
PMS1-219ENST00000483293 OXLD1Q5BKU9 147 aa10.96□□□□□ -0.65
PMS1-219ENST00000483293 SNIP1Q8TAD8 396 aaKnown RBP10.96□□□□□ -0.65
PMS1-219ENST00000483293 TMPRSS4Q9NRS4 437 aa10.96□□□□□ -0.65
PMS1-219ENST00000483293 TOR4AQ9NXH8 423 aa10.96□□□□□ -0.65
PMS1-219ENST00000483293 MAFBQ9Y5Q3 323 aaPredicted RBP10.96□□□□□ -0.65
PMS1-219ENST00000483293 WASF2Q9Y6W5 498 aa10.96□□□□□ -0.65
PMS1-219ENST00000483293 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.95□□□□□ -0.66
PMS1-219ENST00000483293 USP17L5A8MUK1 530 aa10.95□□□□□ -0.66
PMS1-219ENST00000483293 ERVH48-1M5A8F1 160 aa10.95□□□□□ -0.66
PMS1-219ENST00000483293 SMCPP49901 116 aaPredicted RBP10.95□□□□□ -0.66
PMS1-219ENST00000483293 DOLKQ9UPQ8 538 aa10.95□□□□□ -0.66
PMS1-219ENST00000483293 MAP4K5Q9Y4K4 846 aa10.95□□□□□ -0.66
PMS1-219ENST00000483293 ADH1CP00326 375 aa10.94□□□□□ -0.66
PMS1-219ENST00000483293 CTC1Q2NKJ3 1217 aa10.94□□□□□ -0.66
PMS1-219ENST00000483293 RNF20Q5VTR2 975 aa10.94□□□□□ -0.66
PMS1-219ENST00000483293 NR3C2P08235 984 aa10.93□□□□□ -0.66
PMS1-219ENST00000483293 NCOA4Q13772 614 aa10.93□□□□□ -0.66
PMS1-219ENST00000483293 USP17L3A6NCW0 530 aa10.92□□□□□ -0.66
PMS1-219ENST00000483293 USP17L4A6NCW7 530 aa10.92□□□□□ -0.66
PMS1-219ENST00000483293 SNRPBP14678 240 aaKnown RBP10.92□□□□□ -0.66
PMS1-219ENST00000483293 LORP23490 312 aaPredicted RBP10.92□□□□□ -0.66
PMS1-219ENST00000483293 USP17L2Q6R6M4 530 aa10.92□□□□□ -0.66
PMS1-219ENST00000483293 USP17L1Q7RTZ2 530 aa10.92□□□□□ -0.66
PMS1-219ENST00000483293 NNTQ13423 1086 aa10.91□□□□□ -0.66
PMS1-219ENST00000483293 CYLDQ9NQC7 956 aa10.91□□□□□ -0.66
PMS1-219ENST00000483293 NR5A1Q13285 461 aa10.9□□□□□ -0.66
PMS1-219ENST00000483293 PPP1R26Q5T8A7 1209 aaPredicted RBP10.9□□□□□ -0.66
PMS1-219ENST00000483293 CCDC116Q8IYX3 515 aa10.9□□□□□ -0.66
PMS1-219ENST00000483293 MPNDQ8N594 471 aa10.9□□□□□ -0.66
PMS1-219ENST00000483293 NFATC2IPQ8NCF5 419 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms