RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 VASH1Q7L8A9 365 aaPredicted RBP7.74□□□□□ -1.17
LAPTM4A-202ENST00000483117 GPKOWQ92917 476 aaPredicted RBP eCLIP7.74□□□□□ -1.17
LAPTM4A-202ENST00000483117 PURBQ96QR8 312 aaKnown RBP7.74□□□□□ -1.17
LAPTM4A-202ENST00000483117 FKBPLQ9UIM3 349 aa7.74□□□□□ -1.17
LAPTM4A-202ENST00000483117 ERFEQ4G0M1 354 aa7.73□□□□□ -1.17
LAPTM4A-202ENST00000483117 TRMT44Q8IYL2 757 aaKnown RBP7.73□□□□□ -1.17
LAPTM4A-202ENST00000483117 EPS8L1Q8TE68 723 aa7.73□□□□□ -1.17
LAPTM4A-202ENST00000483117 USP17L8P0C7I0 530 aa7.72□□□□□ -1.17
LAPTM4A-202ENST00000483117 SCARF1Q14162 830 aa7.72□□□□□ -1.17
LAPTM4A-202ENST00000483117 PDXDC2PQ6P474 469 aa7.72□□□□□ -1.17
LAPTM4A-202ENST00000483117 ARHGAP9Q9BRR9 750 aa7.72□□□□□ -1.17
LAPTM4A-202ENST00000483117 HMX1Q9NP08 348 aaPredicted RBP7.72□□□□□ -1.17
LAPTM4A-202ENST00000483117 MAP4K5Q9Y4K4 846 aa7.72□□□□□ -1.17
LAPTM4A-202ENST00000483117 RFC5P40937 340 aa7.71□□□□□ -1.18
LAPTM4A-202ENST00000483117 IL27Q8NEV9 243 aa7.71□□□□□ -1.18
LAPTM4A-202ENST00000483117 SOBPA7XYQ1 873 aa7.7□□□□□ -1.18
LAPTM4A-202ENST00000483117 GDF11O95390 407 aa7.7□□□□□ -1.18
LAPTM4A-202ENST00000483117 C6orf118Q5T5N4 469 aa7.7□□□□□ -1.18
LAPTM4A-202ENST00000483117 LCE3BQ5TA77 95 aa7.7□□□□□ -1.18
LAPTM4A-202ENST00000483117 OCSTAMPQ9BR26 566 aa7.7□□□□□ -1.18
LAPTM4A-202ENST00000483117 VEGFBP49765 207 aa7.69□□□□□ -1.18
LAPTM4A-202ENST00000483117 ZBTB33Q86T24 672 aa7.69□□□□□ -1.18
LAPTM4A-202ENST00000483117 PCMTD1Q96MG8 357 aaPredicted RBP7.69□□□□□ -1.18
LAPTM4A-202ENST00000483117 NXF1Q9UBU9 619 aaKnown RBP7.69□□□□□ -1.18
LAPTM4A-202ENST00000483117 BRPF1P55201 1214 aaPredicted RBP7.68□□□□□ -1.18
LAPTM4A-202ENST00000483117 CCDC116Q8IYX3 515 aa7.68□□□□□ -1.18
LAPTM4A-202ENST00000483117 GOPCQ9HD26 462 aa7.68□□□□□ -1.18
LAPTM4A-202ENST00000483117 ZC3H4Q9UPT8 1303 aaKnown RBP7.68□□□□□ -1.18
LAPTM4A-202ENST00000483117 MEIOBQ8N635 442 aa7.67□□□□□ -1.18
LAPTM4A-202ENST00000483117 IRF7Q92985 503 aa7.67□□□□□ -1.18
LAPTM4A-202ENST00000483117 SLC10A4Q96EP9 437 aa7.67□□□□□ -1.18
LAPTM4A-202ENST00000483117 KCTD15Q96SI1 283 aaPredicted RBP7.67□□□□□ -1.18
LAPTM4A-202ENST00000483117 EMILIN1Q9Y6C2 1016 aa7.67□□□□□ -1.18
LAPTM4A-202ENST00000483117 BMP2P12643 396 aa7.66□□□□□ -1.18
LAPTM4A-202ENST00000483117 RASSF7Q02833 373 aa7.66□□□□□ -1.18
LAPTM4A-202ENST00000483117 PTK2Q05397 1052 aa7.66□□□□□ -1.18
LAPTM4A-202ENST00000483117 PPP1R26Q5T8A7 1209 aaPredicted RBP7.66□□□□□ -1.18
LAPTM4A-202ENST00000483117 LINC00528Q8N1L1 170 aa7.66□□□□□ -1.18
LAPTM4A-202ENST00000483117 ADAM32Q8TC27 787 aa7.66□□□□□ -1.18
LAPTM4A-202ENST00000483117 CBLBQ13191 982 aa7.65□□□□□ -1.18
LAPTM4A-202ENST00000483117 TPRNQ4KMQ1 711 aa7.65□□□□□ -1.18
LAPTM4A-202ENST00000483117 TRIM34Q9BYJ4 488 aa7.65□□□□□ -1.18
LAPTM4A-202ENST00000483117 UPP2O95045 317 aa7.64□□□□□ -1.19
LAPTM4A-202ENST00000483117 GPSM3Q9Y4H4 160 aa7.64□□□□□ -1.19
LAPTM4A-202ENST00000483117 MAN1A2O60476 641 aa7.63□□□□□ -1.19
LAPTM4A-202ENST00000483117 TMEM259Q4ZIN3 620 aa7.63□□□□□ -1.19
LAPTM4A-202ENST00000483117 INTS6LQ5JSJ4 861 aaKnown RBP7.63□□□□□ -1.19
LAPTM4A-202ENST00000483117 PGPEP1Q9NXJ5 209 aa7.63□□□□□ -1.19
LAPTM4A-202ENST00000483117 CDV3Q9UKY7 258 aaKnown RBP7.63□□□□□ -1.19
LAPTM4A-202ENST00000483117 ERBB4Q15303 1308 aa7.62□□□□□ -1.19
LAPTM4A-202ENST00000483117 H3BM21 787 aa7.62□□□□□ -1.19
LAPTM4A-202ENST00000483117 RAB15P59190 212 aa7.62□□□□□ -1.19
LAPTM4A-202ENST00000483117 NPAS3Q8IXF0 933 aa7.62□□□□□ -1.19
LAPTM4A-202ENST00000483117 PNMA1Q8ND90 353 aa7.62□□□□□ -1.19
LAPTM4A-202ENST00000483117 KRTAP9-9Q9BYP9 154 aa7.62□□□□□ -1.19
LAPTM4A-202ENST00000483117 KRTAP9-4Q9BYQ2 154 aa7.62□□□□□ -1.19
LAPTM4A-202ENST00000483117 SOS2Q07890 1332 aaPredicted RBP7.61□□□□□ -1.19
LAPTM4A-202ENST00000483117 TSEN34Q9BSV6 310 aaKnown RBP7.61□□□□□ -1.19
LAPTM4A-202ENST00000483117 DNMT3LQ9UJW3 386 aa7.61□□□□□ -1.19
LAPTM4A-202ENST00000483117 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
LAPTM4A-202ENST00000483117 Q6ZVU0 165 aa7.6□□□□□ -1.19
LAPTM4A-202ENST00000483117 DZIP3Q86Y13 1208 aaKnown RBP7.6□□□□□ -1.19
LAPTM4A-202ENST00000483117 GJD4Q96KN9 370 aaPredicted RBP7.6□□□□□ -1.19
LAPTM4A-202ENST00000483117 TMPRSS4Q9NRS4 437 aa7.6□□□□□ -1.19
LAPTM4A-202ENST00000483117 IGHA1P01876 353 aa7.59□□□□□ -1.19
LAPTM4A-202ENST00000483117 DHX9Q08211 1270 aaKnown RBP7.59□□□□□ -1.19
LAPTM4A-202ENST00000483117 AGBL1Q96MI9 1066 aa7.59□□□□□ -1.19
LAPTM4A-202ENST00000483117 FIGNL2A6NMB9 653 aa7.58□□□□□ -1.2
LAPTM4A-202ENST00000483117 NBPF20Q3BBV1 942 aa7.58□□□□□ -1.2
LAPTM4A-202ENST00000483117 GPAT2Q6NUI2 795 aa7.58□□□□□ -1.2
LAPTM4A-202ENST00000483117 TTLL8A6PVC2 850 aa7.57□□□□□ -1.2
LAPTM4A-202ENST00000483117 RELBQ01201 579 aa7.57□□□□□ -1.2
LAPTM4A-202ENST00000483117 ERVH48-1M5A8F1 160 aa7.56□□□□□ -1.2
LAPTM4A-202ENST00000483117 SPINT1O43278 529 aa7.56□□□□□ -1.2
LAPTM4A-202ENST00000483117 PPFIA3O75145 1194 aa7.56□□□□□ -1.2
LAPTM4A-202ENST00000483117 FBXO45P0C2W1 286 aa7.56□□□□□ -1.2
LAPTM4A-202ENST00000483117 ZNF784Q8NCA9 323 aaPredicted RBP7.56□□□□□ -1.2
LAPTM4A-202ENST00000483117 ZBBXA8MT70 800 aa7.55□□□□□ -1.2
LAPTM4A-202ENST00000483117 ESPNB1AK53 854 aa7.55□□□□□ -1.2
LAPTM4A-202ENST00000483117 PCDHB9Q9Y5E1 797 aa7.55□□□□□ -1.2
LAPTM4A-202ENST00000483117 BTBD11A6QL63 1104 aa7.54□□□□□ -1.2
LAPTM4A-202ENST00000483117 LILRA1O75019 489 aa7.54□□□□□ -1.2
LAPTM4A-202ENST00000483117 ADD1P35611 737 aaKnown RBP7.54□□□□□ -1.2
LAPTM4A-202ENST00000483117 CTSOP43234 321 aaPredicted RBP7.54□□□□□ -1.2
LAPTM4A-202ENST00000483117 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.54□□□□□ -1.2
LAPTM4A-202ENST00000483117 INSM2Q96T92 566 aaPredicted RBP7.54□□□□□ -1.2
LAPTM4A-202ENST00000483117 KRTAP4-12Q9BQ66 201 aa7.54□□□□□ -1.2
LAPTM4A-202ENST00000483117 ZNF395Q9H8N7 513 aaPredicted RBP7.54□□□□□ -1.2
LAPTM4A-202ENST00000483117 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
LAPTM4A-202ENST00000483117 VSIG8P0DPA2 414 aa7.53□□□□□ -1.2
LAPTM4A-202ENST00000483117 MTMR14Q8NCE2 650 aa7.53□□□□□ -1.2
LAPTM4A-202ENST00000483117 SNRKQ9NRH2 765 aa7.53□□□□□ -1.2
LAPTM4A-202ENST00000483117 GPR37L1O60883 481 aa7.52□□□□□ -1.21
LAPTM4A-202ENST00000483117 ADAM23O75077 832 aa7.52□□□□□ -1.21
LAPTM4A-202ENST00000483117 ADH1AP07327 375 aa7.52□□□□□ -1.21
LAPTM4A-202ENST00000483117 PTSQ03393 145 aa7.52□□□□□ -1.21
LAPTM4A-202ENST00000483117 KDF1Q8NAX2 398 aaPredicted RBP7.52□□□□□ -1.21
LAPTM4A-202ENST00000483117 BANK1Q8NDB2 785 aa7.52□□□□□ -1.21
LAPTM4A-202ENST00000483117 CYLDQ9NQC7 956 aa7.52□□□□□ -1.21
LAPTM4A-202ENST00000483117 POLMQ9NP87 494 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms