RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 PPME1Q9Y570 386 aa7.11□□□□□ -1.27
R3HDM1-216ENST00000483065 hCG_2014768A0A024R1R8 64 aa7.1□□□□□ -1.27
R3HDM1-216ENST00000483065 MOXD2PA6NHM9 499 aa7.1□□□□□ -1.27
R3HDM1-216ENST00000483065 USP46P62068 366 aa7.1□□□□□ -1.27
R3HDM1-216ENST00000483065 FBXO33Q7Z6M2 555 aa7.1□□□□□ -1.27
R3HDM1-216ENST00000483065 PLEKHM2Q8IWE5 1019 aa7.1□□□□□ -1.27
R3HDM1-216ENST00000483065 SLC43A3Q8NBI5 491 aa7.1□□□□□ -1.27
R3HDM1-216ENST00000483065 ASB16Q96NS5 453 aa7.1□□□□□ -1.27
R3HDM1-216ENST00000483065 MAGEC2Q9UBF1 373 aaPredicted RBP7.1□□□□□ -1.27
R3HDM1-216ENST00000483065 MAPK1P28482 360 aa7.09□□□□□ -1.27
R3HDM1-216ENST00000483065 SERPINB4P48594 390 aa7.09□□□□□ -1.27
R3HDM1-216ENST00000483065 ANAPC15P60006 121 aa7.09□□□□□ -1.27
R3HDM1-216ENST00000483065 PIK3R5Q8WYR1 880 aa7.09□□□□□ -1.27
R3HDM1-216ENST00000483065 NBPF3Q9H094 633 aa7.09□□□□□ -1.27
R3HDM1-216ENST00000483065 ANO8Q9HCE9 1232 aaPredicted RBP7.09□□□□□ -1.27
R3HDM1-216ENST00000483065 LOC102724159A0A0B4J2E5 919 aa7.08□□□□□ -1.28
R3HDM1-216ENST00000483065 PWP2Q15269 919 aaKnown RBP7.08□□□□□ -1.28
R3HDM1-216ENST00000483065 NOM1Q5C9Z4 860 aaKnown RBP7.08□□□□□ -1.28
R3HDM1-216ENST00000483065 ANKK1Q8NFD2 765 aa7.08□□□□□ -1.28
R3HDM1-216ENST00000483065 ZNF526Q8TF50 670 aaPredicted RBP7.08□□□□□ -1.28
R3HDM1-216ENST00000483065 NLRP7Q8WX94 980 aa7.08□□□□□ -1.28
R3HDM1-216ENST00000483065 TRIM34Q9BYJ4 488 aa7.08□□□□□ -1.28
R3HDM1-216ENST00000483065 BRINP2Q9C0B6 783 aa7.08□□□□□ -1.28
R3HDM1-216ENST00000483065 DCTN4Q9UJW0 460 aa7.08□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L3A6NCW0 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L4A6NCW7 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L15C9J2P7 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L10C9JJH3 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L13C9JLJ4 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L12C9JPN9 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L11C9JVI0 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L21D6R901 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L18D6R9N7 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L22D6RA61 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L17D6RBQ6 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L19D6RCP7 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L20D6RJB6 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 ATP5J2-PTCD1G3V325 749 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 TPD52L2O43399 206 aaKnown RBP7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 BCAMP50895 628 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L24Q0WX57 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 RNF187Q5TA31 235 aaPredicted RBP7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L2Q6R6M4 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 PADI6Q6TGC4 694 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L1Q7RTZ2 530 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 GLYCTKQ8IVS8 523 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 RBM33Q96EV2 1170 aaKnown RBP7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 LNPKQ9C0E8 428 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 PRKAG2Q9UGJ0 569 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 BRPF3Q9ULD4 1205 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 PCDHB15Q9Y5E8 787 aa7.07□□□□□ -1.28
R3HDM1-216ENST00000483065 RAB11FIP3O75154 756 aa7.06□□□□□ -1.28
R3HDM1-216ENST00000483065 PTPROQ16827 1216 aa7.06□□□□□ -1.28
R3HDM1-216ENST00000483065 FAM161AQ3B820 660 aa7.06□□□□□ -1.28
R3HDM1-216ENST00000483065 HSP90AB2PQ58FF8 381 aa7.06□□□□□ -1.28
R3HDM1-216ENST00000483065 SDE2Q6IQ49 451 aa7.06□□□□□ -1.28
R3HDM1-216ENST00000483065 TRIM67Q6ZTA4 783 aa7.06□□□□□ -1.28
R3HDM1-216ENST00000483065 EXOC8Q8IYI6 725 aa7.06□□□□□ -1.28
R3HDM1-216ENST00000483065 ZBED2Q9BTP6 218 aa7.06□□□□□ -1.28
R3HDM1-216ENST00000483065 TMX1Q9H3N1 280 aa7.06□□□□□ -1.28
R3HDM1-216ENST00000483065 CCSER2Q9H7U1 834 aa7.06□□□□□ -1.28
R3HDM1-216ENST00000483065 SLF2Q8IX21 1173 aa7.05□□□□□ -1.28
R3HDM1-216ENST00000483065 CABLES1Q8TDN4 633 aa7.05□□□□□ -1.28
R3HDM1-216ENST00000483065 DNAJC2Q99543 621 aaKnown RBP7.05□□□□□ -1.28
R3HDM1-216ENST00000483065 BACH2Q9BYV9 841 aa7.05□□□□□ -1.28
R3HDM1-216ENST00000483065 METTL5Q9NRN9 209 aaKnown RBP7.05□□□□□ -1.28
R3HDM1-216ENST00000483065 WBP1LQ9NX94 342 aa7.05□□□□□ -1.28
R3HDM1-216ENST00000483065 SBNO2Q9Y2G9 1366 aa7.05□□□□□ -1.28
R3HDM1-216ENST00000483065 SKIP12755 728 aa7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 NDUFV2P19404 249 aa7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 RASA1P20936 1047 aa7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 HDLBPQ00341 1268 aaKnown RBP7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 CTDSPL2Q05D32 466 aa7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 PPP1R18Q6NYC8 613 aa7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 MORC4Q8TE76 937 aa7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 PTCD2Q8WV60 388 aaKnown RBP7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 KCNB2Q92953 911 aa7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 TGIF2Q9GZN2 237 aa7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 MRS2Q9HD23 443 aa7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 HMX1Q9NP08 348 aaPredicted RBP7.04□□□□□ -1.28
R3HDM1-216ENST00000483065 SOWAHBA6NEL2 793 aa7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 DDX11L8A8MPP1 907 aa7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 USP17L5A8MUK1 530 aa7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 H3BRB1 525 aa7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 ABL1P00519 1130 aa7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 GTF2F1P35269 517 aaKnown RBP eCLIP7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 NR1H3Q13133 447 aa7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 MTMR2Q13614 643 aa7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 ZNF662Q6ZS27 426 aa7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 TSC1Q92574 1164 aa7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 TUT1Q9H6E5 874 aaKnown RBP7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 MKRN1Q9UHC7 482 aaKnown RBP7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 RBM19Q9Y4C8 960 aaKnown RBP7.03□□□□□ -1.28
R3HDM1-216ENST00000483065 C21orf2O43822 256 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 ICMTO60725 284 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 GPR37L1O60883 481 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 FDX1P10109 184 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 XPCQ01831 940 aaPredicted RBP7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 SF3B2Q13435 895 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms