RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 USP6P35125 1406 aa10.65□□□□□ -0.7
CSDE1-206ENST00000483030 WDR17Q8IZU2 1322 aa10.64□□□□□ -0.71
CSDE1-206ENST00000483030 TOPAZ1Q8N9V7 1692 aa10.64□□□□□ -0.71
CSDE1-206ENST00000483030 SOX12O15370 315 aa10.64□□□□□ -0.71
CSDE1-206ENST00000483030 CSB-PGBD3P0DP91 1061 aa10.64□□□□□ -0.71
CSDE1-206ENST00000483030 ARHGEF25Q86VW2 580 aa10.64□□□□□ -0.71
CSDE1-206ENST00000483030 TTC21BQ7Z4L5 1316 aa10.63□□□□□ -0.71
CSDE1-206ENST00000483030 EVC2Q86UK5 1308 aa10.63□□□□□ -0.71
CSDE1-206ENST00000483030 ZBTB7AO95365 584 aa10.63□□□□□ -0.71
CSDE1-206ENST00000483030 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
CSDE1-206ENST00000483030 CDCA7Q9BWT1 371 aaPredicted RBP10.63□□□□□ -0.71
CSDE1-206ENST00000483030 NINLQ9Y2I6 1382 aa10.63□□□□□ -0.71
CSDE1-206ENST00000483030 NUP188Q5SRE5 1749 aa10.62□□□□□ -0.71
CSDE1-206ENST00000483030 EXOC5O00471 708 aa10.62□□□□□ -0.71
CSDE1-206ENST00000483030 TXNRD1Q16881 649 aa10.62□□□□□ -0.71
CSDE1-206ENST00000483030 KCNH5Q8NCM2 988 aa10.62□□□□□ -0.71
CSDE1-206ENST00000483030 L3MBTL2Q969R5 705 aa10.62□□□□□ -0.71
CSDE1-206ENST00000483030 CARD10Q9BWT7 1032 aa10.62□□□□□ -0.71
CSDE1-206ENST00000483030 ATF5Q9Y2D1 282 aaPredicted RBP10.62□□□□□ -0.71
CSDE1-206ENST00000483030 RREB1Q92766 1687 aa10.62□□□□□ -0.71
CSDE1-206ENST00000483030 C1QBPQ07021 282 aaKnown RBP10.61□□□□□ -0.71
CSDE1-206ENST00000483030 STK32BQ9NY57 414 aa10.61□□□□□ -0.71
CSDE1-206ENST00000483030 SLIT3O75094 1523 aa10.6□□□□□ -0.71
CSDE1-206ENST00000483030 PTGER2P43116 358 aa10.6□□□□□ -0.71
CSDE1-206ENST00000483030 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
CSDE1-206ENST00000483030 KIAA1210Q9ULL0 1709 aa10.6□□□□□ -0.71
CSDE1-206ENST00000483030 CPSF1Q10570 1443 aaKnown RBP10.59□□□□□ -0.71
CSDE1-206ENST00000483030 PARP4Q9UKK3 1724 aaKnown RBP10.59□□□□□ -0.71
CSDE1-206ENST00000483030 SLC15A2Q16348 729 aa10.59□□□□□ -0.71
CSDE1-206ENST00000483030 TTC21AQ8NDW8 1320 aa10.58□□□□□ -0.71
CSDE1-206ENST00000483030 BCL9O00512 1426 aa10.58□□□□□ -0.72
CSDE1-206ENST00000483030 PEAK1Q9H792 1746 aa10.58□□□□□ -0.72
CSDE1-206ENST00000483030 ACSBG1Q96GR2 724 aa10.58□□□□□ -0.72
CSDE1-206ENST00000483030 SIN3AQ96ST3 1273 aa10.58□□□□□ -0.72
CSDE1-206ENST00000483030 NEUROD1Q13562 356 aa10.57□□□□□ -0.72
CSDE1-206ENST00000483030 NCBP3Q53F19 620 aaKnown RBP10.57□□□□□ -0.72
CSDE1-206ENST00000483030 POTEHQ6S545 545 aa10.57□□□□□ -0.72
CSDE1-206ENST00000483030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.57□□□□□ -0.72
CSDE1-206ENST00000483030 SYT17Q9BSW7 474 aa10.57□□□□□ -0.72
CSDE1-206ENST00000483030 FHDC1Q9C0D6 1143 aaPredicted RBP10.57□□□□□ -0.72
CSDE1-206ENST00000483030 NLRP2Q9NX02 1062 aa10.57□□□□□ -0.72
CSDE1-206ENST00000483030 KTN1Q86UP2 1357 aaKnown RBP10.56□□□□□ -0.72
CSDE1-206ENST00000483030 CCDC7Q96M83 1385 aa10.56□□□□□ -0.72
CSDE1-206ENST00000483030 LRRC37A3O60309 1634 aa10.56□□□□□ -0.72
CSDE1-206ENST00000483030 MTFR1LQ9H019 292 aa10.56□□□□□ -0.72
CSDE1-206ENST00000483030 ROCK2O75116 1388 aaKnown RBP10.55□□□□□ -0.72
CSDE1-206ENST00000483030 COL18A1P39060 1754 aa10.55□□□□□ -0.72
CSDE1-206ENST00000483030 PIK3C2AO00443 1686 aa10.55□□□□□ -0.72
CSDE1-206ENST00000483030 ZNF784Q8NCA9 323 aaPredicted RBP10.55□□□□□ -0.72
CSDE1-206ENST00000483030 QRICH2Q9H0J4 1663 aa10.54□□□□□ -0.72
CSDE1-206ENST00000483030 IL2RBP14784 551 aa10.54□□□□□ -0.72
CSDE1-206ENST00000483030 NME9Q86XW9 330 aa10.54□□□□□ -0.72
CSDE1-206ENST00000483030 SGIP1Q9BQI5 828 aa10.54□□□□□ -0.72
CSDE1-206ENST00000483030 TMC1Q8TDI8 760 aa10.53□□□□□ -0.72
CSDE1-206ENST00000483030 ANKRD24Q8TF21 1146 aa10.53□□□□□ -0.72
CSDE1-206ENST00000483030 ARXQ96QS3 562 aa10.53□□□□□ -0.72
CSDE1-206ENST00000483030 ERBB3P21860 1342 aa10.53□□□□□ -0.72
CSDE1-206ENST00000483030 TNS2Q63HR2 1409 aa10.52□□□□□ -0.73
CSDE1-206ENST00000483030 SLC12A5Q9H2X9 1139 aa10.52□□□□□ -0.73
CSDE1-206ENST00000483030 LRRC4BQ9NT99 713 aa10.52□□□□□ -0.73
CSDE1-206ENST00000483030 NFAT5O94916 1531 aa10.52□□□□□ -0.73
CSDE1-206ENST00000483030 RGPD3A6NKT7 1758 aaPredicted RBP10.52□□□□□ -0.73
CSDE1-206ENST00000483030 RGPD4Q7Z3J3 1758 aa10.52□□□□□ -0.73
CSDE1-206ENST00000483030 CASZ1Q86V15 1759 aa10.52□□□□□ -0.73
CSDE1-206ENST00000483030 USP31Q70CQ4 1352 aa10.52□□□□□ -0.73
CSDE1-206ENST00000483030 SBF2Q86WG5 1849 aa10.51□□□□□ -0.73
CSDE1-206ENST00000483030 ZNF827Q17R98 1081 aa10.51□□□□□ -0.73
CSDE1-206ENST00000483030 HDGFL2Q7Z4V5 671 aaPredicted RBP10.51□□□□□ -0.73
CSDE1-206ENST00000483030 DDX54Q8TDD1 881 aaKnown RBP10.51□□□□□ -0.73
CSDE1-206ENST00000483030 SBNO2Q9Y2G9 1366 aa10.51□□□□□ -0.73
CSDE1-206ENST00000483030 LTV1Q96GA3 475 aaPredicted RBP10.5□□□□□ -0.73
CSDE1-206ENST00000483030 TRPM1Q7Z4N2 1603 aa10.5□□□□□ -0.73
CSDE1-206ENST00000483030 GPR162Q16538 588 aa10.49□□□□□ -0.73
CSDE1-206ENST00000483030 CARD11Q9BXL7 1154 aa10.49□□□□□ -0.73
CSDE1-206ENST00000483030 MYOM1P52179 1685 aa10.49□□□□□ -0.73
CSDE1-206ENST00000483030 KCNQ4P56696 695 aa10.48□□□□□ -0.73
CSDE1-206ENST00000483030 KLHL34Q8N239 644 aa10.48□□□□□ -0.73
CSDE1-206ENST00000483030 IP6K1Q92551 441 aa10.48□□□□□ -0.73
CSDE1-206ENST00000483030 AKT1S1Q96B36 256 aa10.48□□□□□ -0.73
CSDE1-206ENST00000483030 TERF2IPQ9NYB0 399 aa10.48□□□□□ -0.73
CSDE1-206ENST00000483030 RGPD5Q99666 1765 aa10.47□□□□□ -0.73
CSDE1-206ENST00000483030 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
CSDE1-206ENST00000483030 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
CSDE1-206ENST00000483030 SLC16A10Q8TF71 515 aa10.47□□□□□ -0.73
CSDE1-206ENST00000483030 SYTL4Q96C24 671 aaPredicted RBP10.47□□□□□ -0.73
CSDE1-206ENST00000483030 TFCP2L1Q9NZI6 479 aa10.47□□□□□ -0.73
CSDE1-206ENST00000483030 CD163L1Q9NR16 1453 aa10.47□□□□□ -0.73
CSDE1-206ENST00000483030 ABCC6O95255 1503 aa10.47□□□□□ -0.73
CSDE1-206ENST00000483030 SENP3-EIF4A1A0A087X0R7 540 aa10.46□□□□□ -0.73
CSDE1-206ENST00000483030 POLD1P28340 1107 aa10.46□□□□□ -0.73
CSDE1-206ENST00000483030 C1QTNF8P60827 252 aa10.46□□□□□ -0.73
CSDE1-206ENST00000483030 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
CSDE1-206ENST00000483030 MAP3K5Q99683 1374 aa10.46□□□□□ -0.74
CSDE1-206ENST00000483030 AKAP12Q02952 1782 aa10.46□□□□□ -0.74
CSDE1-206ENST00000483030 WNK3Q9BYP7 1800 aa10.46□□□□□ -0.74
CSDE1-206ENST00000483030 EDC4Q6P2E9 1401 aaKnown RBP10.45□□□□□ -0.74
CSDE1-206ENST00000483030 PNPLA7Q6ZV29 1317 aa10.45□□□□□ -0.74
CSDE1-206ENST00000483030 FBLN1P23142 703 aa10.45□□□□□ -0.74
CSDE1-206ENST00000483030 HOXD11P31277 338 aaPredicted RBP10.45□□□□□ -0.74
CSDE1-206ENST00000483030 A0A1W2PP64 1363 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 468.8 ms