RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 SBNO1A3KN83 1393 aa10.88□□□□□ -0.67
TVP23B-203ENST00000482741 MRC1P22897 1456 aa10.88□□□□□ -0.67
TVP23B-203ENST00000482741 TRIM66O15016 1216 aa10.87□□□□□ -0.67
TVP23B-203ENST00000482741 IDI1Q13907 227 aa10.87□□□□□ -0.67
TVP23B-203ENST00000482741 TONSLQ96HA7 1378 aa10.87□□□□□ -0.67
TVP23B-203ENST00000482741 MSH5O43196 834 aa10.87□□□□□ -0.67
TVP23B-203ENST00000482741 ATAD2Q6PL18 1390 aa10.87□□□□□ -0.67
TVP23B-203ENST00000482741 PNPLA6Q8IY17 1366 aa10.87□□□□□ -0.67
TVP23B-203ENST00000482741 MAP2P11137 1827 aaKnown RBP10.87□□□□□ -0.67
TVP23B-203ENST00000482741 E2F4Q16254 413 aa10.87□□□□□ -0.67
TVP23B-203ENST00000482741 EDC4Q6P2E9 1401 aaKnown RBP10.86□□□□□ -0.67
TVP23B-203ENST00000482741 CCDC7Q96M83 1385 aa10.86□□□□□ -0.67
TVP23B-203ENST00000482741 SCN11AQ9UI33 1791 aa10.86□□□□□ -0.67
TVP23B-203ENST00000482741 ANKRD36BQ8N2N9 1353 aa10.86□□□□□ -0.67
TVP23B-203ENST00000482741 USP47Q96K76 1375 aa10.86□□□□□ -0.67
TVP23B-203ENST00000482741 PYGBP11216 843 aa10.86□□□□□ -0.67
TVP23B-203ENST00000482741 ZNF526Q8TF50 670 aaPredicted RBP10.85□□□□□ -0.67
TVP23B-203ENST00000482741 BLMP54132 1417 aaPredicted RBP10.85□□□□□ -0.67
TVP23B-203ENST00000482741 RTL1A6NKG5 1358 aa10.84□□□□□ -0.67
TVP23B-203ENST00000482741 NBPF8Q3BBV2 869 aa10.84□□□□□ -0.67
TVP23B-203ENST00000482741 THEMISQ8N1K5 641 aaPredicted RBP10.84□□□□□ -0.67
TVP23B-203ENST00000482741 METP08581 1390 aa10.84□□□□□ -0.67
TVP23B-203ENST00000482741 GPIHBP1Q8IV16 184 aa10.83□□□□□ -0.67
TVP23B-203ENST00000482741 PPP1R1BQ9UD71 204 aaPredicted RBP10.83□□□□□ -0.67
TVP23B-203ENST00000482741 DLG5Q8TDM6 1919 aa10.83□□□□□ -0.68
TVP23B-203ENST00000482741 CACNA1FO60840 1977 aa10.83□□□□□ -0.68
TVP23B-203ENST00000482741 L3MBTL2Q969R5 705 aa10.83□□□□□ -0.68
TVP23B-203ENST00000482741 BCL9O00512 1426 aa10.83□□□□□ -0.68
TVP23B-203ENST00000482741 TMEM94Q12767 1356 aa10.81□□□□□ -0.68
TVP23B-203ENST00000482741 TRAIPQ9BWF2 469 aa10.81□□□□□ -0.68
TVP23B-203ENST00000482741 FBXO41Q8TF61 875 aa10.81□□□□□ -0.68
TVP23B-203ENST00000482741 BRD2P25440 801 aaKnown RBP10.8□□□□□ -0.68
TVP23B-203ENST00000482741 ROBO2Q9HCK4 1378 aa10.8□□□□□ -0.68
TVP23B-203ENST00000482741 RFX1P22670 979 aa10.8□□□□□ -0.68
TVP23B-203ENST00000482741 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
TVP23B-203ENST00000482741 ADGRF5Q8IZF2 1346 aa10.79□□□□□ -0.68
TVP23B-203ENST00000482741 LY75O60449 1722 aa10.79□□□□□ -0.68
TVP23B-203ENST00000482741 ONECUT3O60422 494 aaPredicted RBP10.79□□□□□ -0.68
TVP23B-203ENST00000482741 COL5A3P25940 1745 aaPredicted RBP10.79□□□□□ -0.68
TVP23B-203ENST00000482741 PPP1R37O75864 691 aa10.78□□□□□ -0.68
TVP23B-203ENST00000482741 KCNA6P17658 529 aa10.78□□□□□ -0.68
TVP23B-203ENST00000482741 C1orf167Q5SNV9 1468 aa10.78□□□□□ -0.68
TVP23B-203ENST00000482741 NHSQ6T4R5 1651 aa10.78□□□□□ -0.68
TVP23B-203ENST00000482741 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
TVP23B-203ENST00000482741 USP19O94966 1318 aa10.77□□□□□ -0.68
TVP23B-203ENST00000482741 USP6P35125 1406 aa10.77□□□□□ -0.68
TVP23B-203ENST00000482741 SBF2Q86WG5 1849 aa10.77□□□□□ -0.68
TVP23B-203ENST00000482741 C5P01031 1676 aa10.77□□□□□ -0.69
TVP23B-203ENST00000482741 RGPD5Q99666 1765 aa10.77□□□□□ -0.69
TVP23B-203ENST00000482741 CPDO75976 1380 aa10.77□□□□□ -0.69
TVP23B-203ENST00000482741 SMARCA5O60264 1052 aaPredicted RBP10.76□□□□□ -0.69
TVP23B-203ENST00000482741 LAMB2P55268 1798 aa10.76□□□□□ -0.69
TVP23B-203ENST00000482741 MCM6Q14566 821 aa10.75□□□□□ -0.69
TVP23B-203ENST00000482741 FLIIQ13045 1269 aa10.75□□□□□ -0.69
TVP23B-203ENST00000482741 UBE2Q2Q8WVN8 375 aa10.75□□□□□ -0.69
TVP23B-203ENST00000482741 DISP3Q9P2K9 1392 aa10.74□□□□□ -0.69
TVP23B-203ENST00000482741 PROSER2Q86WR7 435 aaPredicted RBP10.74□□□□□ -0.69
TVP23B-203ENST00000482741 UNCXA6NJT0 531 aa10.73□□□□□ -0.69
TVP23B-203ENST00000482741 PER1O15534 1290 aaPredicted RBP10.73□□□□□ -0.69
TVP23B-203ENST00000482741 CHIC2Q9UKJ5 165 aa10.73□□□□□ -0.69
TVP23B-203ENST00000482741 TTLL12Q14166 644 aaPredicted RBP10.73□□□□□ -0.69
TVP23B-203ENST00000482741 BCORQ6W2J9 1755 aa10.72□□□□□ -0.69
TVP23B-203ENST00000482741 TOGARAM1Q9Y4F4 1720 aa10.72□□□□□ -0.69
TVP23B-203ENST00000482741 PPIP5K1Q6PFW1 1433 aa10.72□□□□□ -0.69
TVP23B-203ENST00000482741 BRPF3Q9ULD4 1205 aa10.71□□□□□ -0.69
TVP23B-203ENST00000482741 RGPD2P0DJD1 1756 aa10.71□□□□□ -0.69
TVP23B-203ENST00000482741 TTC21AQ8NDW8 1320 aa10.71□□□□□ -0.69
TVP23B-203ENST00000482741 TNS1Q9HBL0 1735 aaKnown RBP10.71□□□□□ -0.69
TVP23B-203ENST00000482741 LTKP29376 864 aa10.71□□□□□ -0.69
TVP23B-203ENST00000482741 CDCA8Q53HL2 280 aa10.71□□□□□ -0.7
TVP23B-203ENST00000482741 PARP9Q8IXQ6 854 aa10.7□□□□□ -0.7
TVP23B-203ENST00000482741 CAPN15O75808 1086 aa10.7□□□□□ -0.7
TVP23B-203ENST00000482741 KDM4AO75164 1064 aa10.69□□□□□ -0.7
TVP23B-203ENST00000482741 PCGF6Q9BYE7 350 aa10.69□□□□□ -0.7
TVP23B-203ENST00000482741 NUP188Q5SRE5 1749 aa10.69□□□□□ -0.7
TVP23B-203ENST00000482741 PDE4CQ08493 712 aa10.69□□□□□ -0.7
TVP23B-203ENST00000482741 LARP6Q9BRS8 491 aaKnown RBP10.68□□□□□ -0.7
TVP23B-203ENST00000482741 CASZ1Q86V15 1759 aa10.68□□□□□ -0.7
TVP23B-203ENST00000482741 CCER2I3L3R5 266 aa10.68□□□□□ -0.7
TVP23B-203ENST00000482741 FBXO31Q5XUX0 539 aaPredicted RBP10.67□□□□□ -0.7
TVP23B-203ENST00000482741 KDRP35968 1356 aa10.67□□□□□ -0.7
TVP23B-203ENST00000482741 A0A0U1RQG5 324 aaPredicted RBP10.67□□□□□ -0.7
TVP23B-203ENST00000482741 CCDC27Q2M243 656 aa10.67□□□□□ -0.7
TVP23B-203ENST00000482741 TNS3Q68CZ2 1445 aa10.67□□□□□ -0.7
TVP23B-203ENST00000482741 ANKLE2Q86XL3 938 aa10.66□□□□□ -0.7
TVP23B-203ENST00000482741 CENPJQ9HC77 1338 aaPredicted RBP10.66□□□□□ -0.7
TVP23B-203ENST00000482741 ARFGEF2Q9Y6D5 1785 aa10.66□□□□□ -0.7
TVP23B-203ENST00000482741 DISP2A7MBM2 1401 aa10.66□□□□□ -0.7
TVP23B-203ENST00000482741 GSE1Q14687 1217 aa10.66□□□□□ -0.7
TVP23B-203ENST00000482741 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.65□□□□□ -0.7
TVP23B-203ENST00000482741 ANKRD36CQ5JPF3 1778 aa10.65□□□□□ -0.7
TVP23B-203ENST00000482741 KIF7Q2M1P5 1343 aa10.65□□□□□ -0.71
TVP23B-203ENST00000482741 TJP1Q07157 1748 aa10.64□□□□□ -0.71
TVP23B-203ENST00000482741 ITGB4P16144 1822 aa10.64□□□□□ -0.71
TVP23B-203ENST00000482741 TAF1LQ8IZX4 1826 aa10.64□□□□□ -0.71
TVP23B-203ENST00000482741 NUBP1P53384 320 aa10.64□□□□□ -0.71
TVP23B-203ENST00000482741 ZNF592Q92610 1267 aa10.64□□□□□ -0.71
TVP23B-203ENST00000482741 ZBTB47Q9UFB7 747 aaPredicted RBP10.64□□□□□ -0.71
TVP23B-203ENST00000482741 IVNS1ABPQ9Y6Y0 642 aa10.64□□□□□ -0.71
TVP23B-203ENST00000482741 NGEFQ8N5V2 710 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms