RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 PLSCR1O15162 318 aa17.1■□□□□ 0.33
FAM3D-202ENST00000482623 EZH2Q15910 746 aaKnown RBP17.1■□□□□ 0.33
FAM3D-202ENST00000482623 NBPF14Q5TI25 921 aa17.1■□□□□ 0.33
FAM3D-202ENST00000482623 NINLQ9Y2I6 1382 aa17.1■□□□□ 0.33
FAM3D-202ENST00000482623 ABCC6O95255 1503 aa17.09■□□□□ 0.33
FAM3D-202ENST00000482623 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.32
FAM3D-202ENST00000482623 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
FAM3D-202ENST00000482623 OVOS2A0A0J9YW53 1432 aa17.07■□□□□ 0.32
FAM3D-202ENST00000482623 OVOS2Q6IE36 1432 aa17.07■□□□□ 0.32
FAM3D-202ENST00000482623 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
FAM3D-202ENST00000482623 BCL11BQ9C0K0 894 aaPredicted RBP17.07■□□□□ 0.32
FAM3D-202ENST00000482623 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
FAM3D-202ENST00000482623 ZBTB7CA1YPR0 619 aa17.06■□□□□ 0.32
FAM3D-202ENST00000482623 EXOC5O00471 708 aa17.06■□□□□ 0.32
FAM3D-202ENST00000482623 TMC1Q8TDI8 760 aa17.06■□□□□ 0.32
FAM3D-202ENST00000482623 TESK2Q96S53 571 aa17.06■□□□□ 0.32
FAM3D-202ENST00000482623 PIK3C2AO00443 1686 aa17.06■□□□□ 0.32
FAM3D-202ENST00000482623 EDC4Q6P2E9 1401 aaKnown RBP17.05■□□□□ 0.32
FAM3D-202ENST00000482623 PSDA5PKW4 1024 aaPredicted RBP17.05■□□□□ 0.32
FAM3D-202ENST00000482623 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
FAM3D-202ENST00000482623 R3HDM1Q15032 1099 aaKnown RBP17.05■□□□□ 0.32
FAM3D-202ENST00000482623 COL18A1P39060 1754 aa17.05■□□□□ 0.32
FAM3D-202ENST00000482623 PARP4Q9UKK3 1724 aaKnown RBP17.04■□□□□ 0.32
FAM3D-202ENST00000482623 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.04■□□□□ 0.32
FAM3D-202ENST00000482623 CD163L1Q9NR16 1453 aa17.04■□□□□ 0.32
FAM3D-202ENST00000482623 LRP5O75197 1615 aa17.03■□□□□ 0.32
FAM3D-202ENST00000482623 AKAP12Q02952 1782 aa17.03■□□□□ 0.32
FAM3D-202ENST00000482623 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
FAM3D-202ENST00000482623 NFAT5O94916 1531 aa17.02■□□□□ 0.32
FAM3D-202ENST00000482623 MARCH10Q8NA82 808 aaPredicted RBP17.02■□□□□ 0.32
FAM3D-202ENST00000482623 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
FAM3D-202ENST00000482623 CDCA8Q53HL2 280 aa17.01■□□□□ 0.31
FAM3D-202ENST00000482623 NME9Q86XW9 330 aa17.01■□□□□ 0.31
FAM3D-202ENST00000482623 ERBB3P21860 1342 aa17■□□□□ 0.31
FAM3D-202ENST00000482623 CLSPNQ9HAW4 1339 aa17■□□□□ 0.31
FAM3D-202ENST00000482623 SOX12O15370 315 aa16.99■□□□□ 0.31
FAM3D-202ENST00000482623 IP6K1Q92551 441 aa16.99■□□□□ 0.31
FAM3D-202ENST00000482623 A0A1W2PP64 1363 aa16.99■□□□□ 0.31
FAM3D-202ENST00000482623 USP54Q70EL1 1684 aa16.98■□□□□ 0.31
FAM3D-202ENST00000482623 TMF1P82094 1093 aa16.98■□□□□ 0.31
FAM3D-202ENST00000482623 MON2Q7Z3U7 1717 aa16.97■□□□□ 0.31
FAM3D-202ENST00000482623 IL2RBP14784 551 aa16.97■□□□□ 0.31
FAM3D-202ENST00000482623 COG3Q96JB2 828 aa16.97■□□□□ 0.31
FAM3D-202ENST00000482623 ANKRD24Q8TF21 1146 aa16.96■□□□□ 0.31
FAM3D-202ENST00000482623 NLRP2Q9NX02 1062 aa16.96■□□□□ 0.31
FAM3D-202ENST00000482623 PEAK1Q9H792 1746 aa16.96■□□□□ 0.3
FAM3D-202ENST00000482623 ANKRD36BQ8N2N9 1353 aa16.94■□□□□ 0.3
FAM3D-202ENST00000482623 SPON1Q9HCB6 807 aa16.94■□□□□ 0.3
FAM3D-202ENST00000482623 PROM2Q8N271 834 aa16.93■□□□□ 0.3
FAM3D-202ENST00000482623 LRRC37A3O60309 1634 aa16.92■□□□□ 0.3
FAM3D-202ENST00000482623 KCNQ2O43526 872 aa16.92■□□□□ 0.3
FAM3D-202ENST00000482623 TNS2Q63HR2 1409 aa16.92■□□□□ 0.3
FAM3D-202ENST00000482623 RGPD3A6NKT7 1758 aaPredicted RBP16.92■□□□□ 0.3
FAM3D-202ENST00000482623 RGPD4Q7Z3J3 1758 aa16.92■□□□□ 0.3
FAM3D-202ENST00000482623 RREB1Q92766 1687 aa16.91■□□□□ 0.3
FAM3D-202ENST00000482623 USP47Q96K76 1375 aa16.9■□□□□ 0.3
FAM3D-202ENST00000482623 FYB1O15117 783 aa16.9■□□□□ 0.3
FAM3D-202ENST00000482623 TXNRD1Q16881 649 aa16.9■□□□□ 0.3
FAM3D-202ENST00000482623 AMPHP49418 695 aa16.89■□□□□ 0.29
FAM3D-202ENST00000482623 CGNL1Q0VF96 1302 aa16.89■□□□□ 0.29
FAM3D-202ENST00000482623 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.29
FAM3D-202ENST00000482623 HMGB2P26583 209 aaKnown RBP16.88■□□□□ 0.29
FAM3D-202ENST00000482623 HOXC9P31274 260 aa16.88■□□□□ 0.29
FAM3D-202ENST00000482623 PTF1AQ7RTS3 328 aa16.88■□□□□ 0.29
FAM3D-202ENST00000482623 MAP3K19Q56UN5 1328 aa16.88■□□□□ 0.29
FAM3D-202ENST00000482623 RTL1A6NKG5 1358 aa16.88■□□□□ 0.29
FAM3D-202ENST00000482623 STK32BQ9NY57 414 aa16.87■□□□□ 0.29
FAM3D-202ENST00000482623 SLC15A2Q16348 729 aa16.86■□□□□ 0.29
FAM3D-202ENST00000482623 NUP188Q5SRE5 1749 aa16.86■□□□□ 0.29
FAM3D-202ENST00000482623 SBF2Q86WG5 1849 aa16.86■□□□□ 0.29
FAM3D-202ENST00000482623 RGPD5Q99666 1765 aa16.84■□□□□ 0.29
FAM3D-202ENST00000482623 WNK3Q9BYP7 1800 aa16.84■□□□□ 0.29
FAM3D-202ENST00000482623 SLC27A3Q5K4L6 730 aa16.84■□□□□ 0.29
FAM3D-202ENST00000482623 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
FAM3D-202ENST00000482623 ZCRB1Q8TBF4 217 aaKnown RBP16.83■□□□□ 0.28
FAM3D-202ENST00000482623 ANO8Q9HCE9 1232 aaPredicted RBP16.83■□□□□ 0.28
FAM3D-202ENST00000482623 PPP1R1BQ9UD71 204 aaPredicted RBP16.83■□□□□ 0.28
FAM3D-202ENST00000482623 LTV1Q96GA3 475 aaPredicted RBP16.81■□□□□ 0.28
FAM3D-202ENST00000482623 ACSBG1Q96GR2 724 aa16.81■□□□□ 0.28
FAM3D-202ENST00000482623 GGNBP2Q9H3C7 697 aa16.81■□□□□ 0.28
FAM3D-202ENST00000482623 INSRP06213 1382 aa16.8■□□□□ 0.28
FAM3D-202ENST00000482623 LTN1O94822 1766 aa16.8■□□□□ 0.28
FAM3D-202ENST00000482623 DDX54Q8TDD1 881 aaKnown RBP16.8■□□□□ 0.28
FAM3D-202ENST00000482623 MTFR1LQ9H019 292 aa16.8■□□□□ 0.28
FAM3D-202ENST00000482623 NBPF6Q5VWK0 638 aa16.79■□□□□ 0.28
FAM3D-202ENST00000482623 SLC16A10Q8TF71 515 aa16.79■□□□□ 0.28
FAM3D-202ENST00000482623 NBPF4Q96M43 638 aa16.79■□□□□ 0.28
FAM3D-202ENST00000482623 CARD14Q9BXL6 1004 aa16.79■□□□□ 0.28
FAM3D-202ENST00000482623 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
FAM3D-202ENST00000482623 FAM208AQ9UK61 1670 aaKnown RBP16.78■□□□□ 0.28
FAM3D-202ENST00000482623 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
FAM3D-202ENST00000482623 RAPGEF4Q8WZA2 1011 aa16.78■□□□□ 0.28
FAM3D-202ENST00000482623 FLT4P35916 1363 aa16.77■□□□□ 0.28
FAM3D-202ENST00000482623 FBLN1P23142 703 aa16.77■□□□□ 0.28
FAM3D-202ENST00000482623 PTGER2P43116 358 aa16.77■□□□□ 0.28
FAM3D-202ENST00000482623 NHSQ6T4R5 1651 aa16.77■□□□□ 0.28
FAM3D-202ENST00000482623 TATP17735 454 aaPredicted RBP16.76■□□□□ 0.27
FAM3D-202ENST00000482623 PRIM1P49642 420 aaKnown RBP16.76■□□□□ 0.27
FAM3D-202ENST00000482623 HSP90AB2PQ58FF8 381 aa16.75■□□□□ 0.27
FAM3D-202ENST00000482623 WASHC2AQ641Q2 1341 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms