RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 NME9Q86XW9 330 aa27.83■■■□□ 2.05
MSH5-215ENST00000482280 A0A1W2PP64 1363 aa27.83■■■□□ 2.05
MSH5-215ENST00000482280 FAM182BQ5T319 152 aa27.82■■■□□ 2.04
MSH5-215ENST00000482280 FAM196AQ6ZSG2 479 aa27.82■■■□□ 2.04
MSH5-215ENST00000482280 DEFB132Q7Z7B7 95 aa27.81■■■□□ 2.04
MSH5-215ENST00000482280 USP31Q70CQ4 1352 aa27.81■■■□□ 2.04
MSH5-215ENST00000482280 CD163L1Q9NR16 1453 aa27.81■■■□□ 2.04
MSH5-215ENST00000482280 EP400Q96L91 3159 aa27.79■■■□□ 2.04
MSH5-215ENST00000482280 WDR17Q8IZU2 1322 aa27.78■■■□□ 2.04
MSH5-215ENST00000482280 AXIN2Q9Y2T1 843 aa27.76■■■□□ 2.03
MSH5-215ENST00000482280 C11orf95C9JLR9 678 aaPredicted RBP27.74■■■□□ 2.03
MSH5-215ENST00000482280 COG3Q96JB2 828 aa27.74■■■□□ 2.03
MSH5-215ENST00000482280 CDCA7Q9BWT1 371 aaPredicted RBP27.74■■■□□ 2.03
MSH5-215ENST00000482280 NFAT5O94916 1531 aa27.73■■■□□ 2.03
MSH5-215ENST00000482280 ANKRD36BQ8N2N9 1353 aa27.73■■■□□ 2.03
MSH5-215ENST00000482280 DDB1Q16531 1140 aa27.72■■■□□ 2.03
MSH5-215ENST00000482280 ABCC6O95255 1503 aa27.72■■■□□ 2.03
MSH5-215ENST00000482280 TRIM37O94972 964 aa27.71■■■□□ 2.03
MSH5-215ENST00000482280 RGPD1P0DJD0 1748 aa27.71■■■□□ 2.03
MSH5-215ENST00000482280 CARD10Q9BWT7 1032 aa27.7■■■□□ 2.02
MSH5-215ENST00000482280 COL18A1P39060 1754 aa27.69■■■□□ 2.02
MSH5-215ENST00000482280 USP54Q70EL1 1684 aa27.68■■■□□ 2.02
MSH5-215ENST00000482280 EN1Q05925 392 aaPredicted RBP27.67■■■□□ 2.02
MSH5-215ENST00000482280 CCDC7Q96M83 1385 aa27.67■■■□□ 2.02
MSH5-215ENST00000482280 APBA3O96018 575 aa27.66■■■□□ 2.02
MSH5-215ENST00000482280 NLRP2Q9NX02 1062 aa27.66■■■□□ 2.02
MSH5-215ENST00000482280 OVOS2A0A0J9YW53 1432 aa27.66■■■□□ 2.02
MSH5-215ENST00000482280 OVOS2Q6IE36 1432 aa27.66■■■□□ 2.02
MSH5-215ENST00000482280 PARP4Q9UKK3 1724 aaKnown RBP27.65■■■□□ 2.02
MSH5-215ENST00000482280 OVOS2A0A0G2JMS6 1433 aa27.64■■■□□ 2.02
MSH5-215ENST00000482280 ERBB3P21860 1342 aa27.63■■■□□ 2.01
MSH5-215ENST00000482280 EIF4G2P78344 907 aaKnown RBP eCLIP27.62■■■□□ 2.01
MSH5-215ENST00000482280 ANKRD24Q8TF21 1146 aa27.62■■■□□ 2.01
MSH5-215ENST00000482280 POLR3GLQ9BT43 218 aa27.62■■■□□ 2.01
MSH5-215ENST00000482280 DISP2A7MBM2 1401 aa27.61■■■□□ 2.01
MSH5-215ENST00000482280 EXOC5O00471 708 aa27.61■■■□□ 2.01
MSH5-215ENST00000482280 AMPHP49418 695 aa27.61■■■□□ 2.01
MSH5-215ENST00000482280 RGPD5Q99666 1765 aa27.6■■■□□ 2.01
MSH5-215ENST00000482280 LTN1O94822 1766 aa27.6■■■□□ 2.01
MSH5-215ENST00000482280 IP6K1Q92551 441 aa27.59■■■□□ 2.01
MSH5-215ENST00000482280 PARD3Q8TEW0 1356 aa27.59■■■□□ 2.01
MSH5-215ENST00000482280 LRRC37A3O60309 1634 aa27.57■■■□□ 2
MSH5-215ENST00000482280 EZH2Q15910 746 aaKnown RBP27.57■■■□□ 2
MSH5-215ENST00000482280 LTV1Q96GA3 475 aaPredicted RBP27.57■■■□□ 2
MSH5-215ENST00000482280 GGNBP2Q9H3C7 697 aa27.57■■■□□ 2
MSH5-215ENST00000482280 TNS1Q9HBL0 1735 aaKnown RBP27.56■■■□□ 2
MSH5-215ENST00000482280 FYB1O15117 783 aa27.55■■■□□ 2
MSH5-215ENST00000482280 IL2RBP14784 551 aa27.55■■■□□ 2
MSH5-215ENST00000482280 MAP3K19Q56UN5 1328 aa27.54■■■□□ 2
MSH5-215ENST00000482280 CAMKK2Q96RR4 588 aa27.53■■■□□ 2
MSH5-215ENST00000482280 WNK3Q9BYP7 1800 aa27.52■■■□□ 2
MSH5-215ENST00000482280 PSDA5PKW4 1024 aaPredicted RBP27.51■■□□□ 1.99
MSH5-215ENST00000482280 HOXC9P31274 260 aa27.51■■□□□ 1.99
MSH5-215ENST00000482280 MARCH10Q8NA82 808 aaPredicted RBP27.51■■□□□ 1.99
MSH5-215ENST00000482280 HSPA5P11021 654 aaKnown RBP27.5■■□□□ 1.99
MSH5-215ENST00000482280 NBPF14Q5TI25 921 aa27.5■■□□□ 1.99
MSH5-215ENST00000482280 TNS2Q63HR2 1409 aa27.5■■□□□ 1.99
MSH5-215ENST00000482280 NSD3Q9BZ95 1437 aa27.5■■□□□ 1.99
MSH5-215ENST00000482280 RTL1A6NKG5 1358 aa27.49■■□□□ 1.99
MSH5-215ENST00000482280 BCL11BQ9C0K0 894 aaPredicted RBP27.49■■□□□ 1.99
MSH5-215ENST00000482280 SMG6Q86US8 1419 aaKnown RBP27.49■■□□□ 1.99
MSH5-215ENST00000482280 RRS1Q15050 365 aaKnown RBP27.48■■□□□ 1.99
MSH5-215ENST00000482280 CGNL1Q0VF96 1302 aa27.47■■□□□ 1.99
MSH5-215ENST00000482280 R3HDM1Q15032 1099 aaKnown RBP27.47■■□□□ 1.99
MSH5-215ENST00000482280 FBLN1P23142 703 aa27.46■■□□□ 1.99
MSH5-215ENST00000482280 CARD14Q9BXL6 1004 aa27.45■■□□□ 1.98
MSH5-215ENST00000482280 PEAK1Q9H792 1746 aa27.44■■□□□ 1.98
MSH5-215ENST00000482280 KIF20BQ96Q89 1820 aa27.44■■□□□ 1.98
MSH5-215ENST00000482280 BCL9O00512 1426 aa27.44■■□□□ 1.98
MSH5-215ENST00000482280 FAM208AQ9UK61 1670 aaKnown RBP27.44■■□□□ 1.98
MSH5-215ENST00000482280 MYOM1P52179 1685 aa27.43■■□□□ 1.98
MSH5-215ENST00000482280 PLSCR1O15162 318 aa27.42■■□□□ 1.98
MSH5-215ENST00000482280 FLT4P35916 1363 aa27.39■■□□□ 1.98
MSH5-215ENST00000482280 KIF24Q5T7B8 1368 aa27.39■■□□□ 1.98
MSH5-215ENST00000482280 PPM1GO15355 546 aaPredicted RBP27.39■■□□□ 1.98
MSH5-215ENST00000482280 DDX54Q8TDD1 881 aaKnown RBP27.39■■□□□ 1.98
MSH5-215ENST00000482280 ACSBG1Q96GR2 724 aa27.37■■□□□ 1.97
MSH5-215ENST00000482280 RAPGEF4Q8WZA2 1011 aa27.36■■□□□ 1.97
MSH5-215ENST00000482280 INSRP06213 1382 aa27.35■■□□□ 1.97
MSH5-215ENST00000482280 SBF2Q86WG5 1849 aa27.34■■□□□ 1.97
MSH5-215ENST00000482280 RREB1Q92766 1687 aa27.34■■□□□ 1.97
MSH5-215ENST00000482280 HSP90AB2PQ58FF8 381 aa27.34■■□□□ 1.97
MSH5-215ENST00000482280 PTF1AQ7RTS3 328 aa27.33■■□□□ 1.97
MSH5-215ENST00000482280 PANK3Q9H999 370 aa27.33■■□□□ 1.97
MSH5-215ENST00000482280 NBPF6Q5VWK0 638 aa27.32■■□□□ 1.96
MSH5-215ENST00000482280 ZCRB1Q8TBF4 217 aaKnown RBP27.32■■□□□ 1.96
MSH5-215ENST00000482280 NBPF4Q96M43 638 aa27.32■■□□□ 1.96
MSH5-215ENST00000482280 RGPD3A6NKT7 1758 aaPredicted RBP27.31■■□□□ 1.96
MSH5-215ENST00000482280 RGPD4Q7Z3J3 1758 aa27.31■■□□□ 1.96
MSH5-215ENST00000482280 KCNQ2O43526 872 aa27.31■■□□□ 1.96
MSH5-215ENST00000482280 TATP17735 454 aaPredicted RBP27.31■■□□□ 1.96
MSH5-215ENST00000482280 EMILIN1Q9Y6C2 1016 aa27.31■■□□□ 1.96
MSH5-215ENST00000482280 NUP188Q5SRE5 1749 aa27.3■■□□□ 1.96
MSH5-215ENST00000482280 USHBP1Q8N6Y0 703 aa27.3■■□□□ 1.96
MSH5-215ENST00000482280 TNNT2P45379 298 aaPredicted RBP27.29■■□□□ 1.96
MSH5-215ENST00000482280 LRP5O75197 1615 aa27.28■■□□□ 1.96
MSH5-215ENST00000482280 TXNRD1Q16881 649 aa27.28■■□□□ 1.96
MSH5-215ENST00000482280 SYTL4Q96C24 671 aaPredicted RBP27.28■■□□□ 1.96
MSH5-215ENST00000482280 KNSTRNQ9Y448 316 aa27.27■■□□□ 1.96
MSH5-215ENST00000482280 NHSQ6T4R5 1651 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms