RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 HDGFL2Q7Z4V5 671 aaPredicted RBP19■□□□□ 0.63
CTDSP1-208ENST00000482272 ARHGEF25Q86VW2 580 aa19■□□□□ 0.63
CTDSP1-208ENST00000482272 PEAK1Q9H792 1746 aa19■□□□□ 0.63
CTDSP1-208ENST00000482272 C11orf95C9JLR9 678 aaPredicted RBP18.99■□□□□ 0.63
CTDSP1-208ENST00000482272 SOX12O15370 315 aa18.99■□□□□ 0.63
CTDSP1-208ENST00000482272 PUS7Q96PZ0 661 aaKnown RBP18.99■□□□□ 0.63
CTDSP1-208ENST00000482272 SLC12A5Q9H2X9 1139 aa18.99■□□□□ 0.63
CTDSP1-208ENST00000482272 LTN1O94822 1766 aa18.98■□□□□ 0.63
CTDSP1-208ENST00000482272 A0A1W2PP64 1363 aa18.98■□□□□ 0.63
CTDSP1-208ENST00000482272 APBA3O96018 575 aa18.98■□□□□ 0.63
CTDSP1-208ENST00000482272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.98■□□□□ 0.63
CTDSP1-208ENST00000482272 ST20-MTHFSA0A0A6YYL1 179 aa18.97■□□□□ 0.63
CTDSP1-208ENST00000482272 NME9Q86XW9 330 aa18.97■□□□□ 0.63
CTDSP1-208ENST00000482272 TERF2IPQ9NYB0 399 aa18.97■□□□□ 0.63
CTDSP1-208ENST00000482272 WDR17Q8IZU2 1322 aa18.97■□□□□ 0.63
CTDSP1-208ENST00000482272 CSB-PGBD3P0DP91 1061 aa18.96■□□□□ 0.63
CTDSP1-208ENST00000482272 EZH2Q15910 746 aaKnown RBP18.96■□□□□ 0.63
CTDSP1-208ENST00000482272 DISP2A7MBM2 1401 aa18.96■□□□□ 0.63
CTDSP1-208ENST00000482272 USP31Q70CQ4 1352 aa18.95■□□□□ 0.62
CTDSP1-208ENST00000482272 DDB1Q16531 1140 aa18.95■□□□□ 0.62
CTDSP1-208ENST00000482272 CDCA7Q9BWT1 371 aaPredicted RBP18.95■□□□□ 0.62
CTDSP1-208ENST00000482272 RREB1Q92766 1687 aa18.95■□□□□ 0.62
CTDSP1-208ENST00000482272 PSDA5PKW4 1024 aaPredicted RBP18.94■□□□□ 0.62
CTDSP1-208ENST00000482272 CAMKK2Q96RR4 588 aa18.94■□□□□ 0.62
CTDSP1-208ENST00000482272 SBF2Q86WG5 1849 aa18.93■□□□□ 0.62
CTDSP1-208ENST00000482272 OVOS2A0A0J9YW53 1432 aa18.93■□□□□ 0.62
CTDSP1-208ENST00000482272 OVOS2Q6IE36 1432 aa18.93■□□□□ 0.62
CTDSP1-208ENST00000482272 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
CTDSP1-208ENST00000482272 ABCC6O95255 1503 aa18.92■□□□□ 0.62
CTDSP1-208ENST00000482272 PARD3Q8TEW0 1356 aa18.92■□□□□ 0.62
CTDSP1-208ENST00000482272 NUP188Q5SRE5 1749 aa18.91■□□□□ 0.62
CTDSP1-208ENST00000482272 CARD10Q9BWT7 1032 aa18.91■□□□□ 0.62
CTDSP1-208ENST00000482272 MYOM1P52179 1685 aa18.91■□□□□ 0.62
CTDSP1-208ENST00000482272 USP47Q96K76 1375 aa18.91■□□□□ 0.62
CTDSP1-208ENST00000482272 R3HDM1Q15032 1099 aaKnown RBP18.89■□□□□ 0.61
CTDSP1-208ENST00000482272 EXOC5O00471 708 aa18.88■□□□□ 0.61
CTDSP1-208ENST00000482272 NBPF14Q5TI25 921 aa18.88■□□□□ 0.61
CTDSP1-208ENST00000482272 NINLQ9Y2I6 1382 aa18.88■□□□□ 0.61
CTDSP1-208ENST00000482272 OVOS2A0A0G2JMS6 1433 aa18.88■□□□□ 0.61
CTDSP1-208ENST00000482272 CCDC7Q96M83 1385 aa18.87■□□□□ 0.61
CTDSP1-208ENST00000482272 LRP5O75197 1615 aa18.86■□□□□ 0.61
CTDSP1-208ENST00000482272 TMF1P82094 1093 aa18.86■□□□□ 0.61
CTDSP1-208ENST00000482272 PTF1AQ7RTS3 328 aa18.86■□□□□ 0.61
CTDSP1-208ENST00000482272 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
CTDSP1-208ENST00000482272 TIMELESSQ9UNS1 1208 aa18.85■□□□□ 0.61
CTDSP1-208ENST00000482272 FBLN1P23142 703 aa18.84■□□□□ 0.61
CTDSP1-208ENST00000482272 MARCH10Q8NA82 808 aaPredicted RBP18.84■□□□□ 0.61
CTDSP1-208ENST00000482272 BCL11BQ9C0K0 894 aaPredicted RBP18.84■□□□□ 0.61
CTDSP1-208ENST00000482272 NLRP2Q9NX02 1062 aa18.84■□□□□ 0.61
CTDSP1-208ENST00000482272 RGPD2P0DJD1 1756 aa18.83■□□□□ 0.61
CTDSP1-208ENST00000482272 ERBB3P21860 1342 aa18.83■□□□□ 0.61
CTDSP1-208ENST00000482272 PLSCR1O15162 318 aa18.83■□□□□ 0.6
CTDSP1-208ENST00000482272 COG3Q96JB2 828 aa18.83■□□□□ 0.6
CTDSP1-208ENST00000482272 ANKRD36BQ8N2N9 1353 aa18.82■□□□□ 0.6
CTDSP1-208ENST00000482272 KIF20BQ96Q89 1820 aa18.82■□□□□ 0.6
CTDSP1-208ENST00000482272 CDCA8Q53HL2 280 aa18.82■□□□□ 0.6
CTDSP1-208ENST00000482272 ANKRD24Q8TF21 1146 aa18.82■□□□□ 0.6
CTDSP1-208ENST00000482272 RGPD3A6NKT7 1758 aaPredicted RBP18.81■□□□□ 0.6
CTDSP1-208ENST00000482272 RGPD4Q7Z3J3 1758 aa18.81■□□□□ 0.6
CTDSP1-208ENST00000482272 FAM208AQ9UK61 1670 aaKnown RBP18.8■□□□□ 0.6
CTDSP1-208ENST00000482272 IL2RBP14784 551 aa18.8■□□□□ 0.6
CTDSP1-208ENST00000482272 IP6K1Q92551 441 aa18.8■□□□□ 0.6
CTDSP1-208ENST00000482272 BCL9O00512 1426 aa18.8■□□□□ 0.6
CTDSP1-208ENST00000482272 TNS2Q63HR2 1409 aa18.8■□□□□ 0.6
CTDSP1-208ENST00000482272 CLSPNQ9HAW4 1339 aa18.78■□□□□ 0.6
CTDSP1-208ENST00000482272 SHANK3Q9BYB0 1731 aa18.77■□□□□ 0.6
CTDSP1-208ENST00000482272 MAP3K19Q56UN5 1328 aa18.76■□□□□ 0.59
CTDSP1-208ENST00000482272 NHSQ6T4R5 1651 aa18.76■□□□□ 0.59
CTDSP1-208ENST00000482272 AMPHP49418 695 aa18.76■□□□□ 0.59
CTDSP1-208ENST00000482272 FYB1O15117 783 aa18.75■□□□□ 0.59
CTDSP1-208ENST00000482272 LTV1Q96GA3 475 aaPredicted RBP18.75■□□□□ 0.59
CTDSP1-208ENST00000482272 CARD14Q9BXL6 1004 aa18.74■□□□□ 0.59
CTDSP1-208ENST00000482272 GGNBP2Q9H3C7 697 aa18.74■□□□□ 0.59
CTDSP1-208ENST00000482272 HOXC9P31274 260 aa18.73■□□□□ 0.59
CTDSP1-208ENST00000482272 PROM2Q8N271 834 aa18.72■□□□□ 0.59
CTDSP1-208ENST00000482272 KCNQ2O43526 872 aa18.71■□□□□ 0.59
CTDSP1-208ENST00000482272 RRS1Q15050 365 aaKnown RBP18.71■□□□□ 0.59
CTDSP1-208ENST00000482272 ACSBG1Q96GR2 724 aa18.71■□□□□ 0.59
CTDSP1-208ENST00000482272 BTAF1O14981 1849 aa18.71■□□□□ 0.59
CTDSP1-208ENST00000482272 CASZ1Q86V15 1759 aa18.7■□□□□ 0.58
CTDSP1-208ENST00000482272 TXNRD1Q16881 649 aa18.7■□□□□ 0.58
CTDSP1-208ENST00000482272 NSD3Q9BZ95 1437 aa18.7■□□□□ 0.58
CTDSP1-208ENST00000482272 SPON1Q9HCB6 807 aa18.7■□□□□ 0.58
CTDSP1-208ENST00000482272 ANO8Q9HCE9 1232 aaPredicted RBP18.7■□□□□ 0.58
CTDSP1-208ENST00000482272 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
CTDSP1-208ENST00000482272 MEGF6O75095 1541 aa18.69■□□□□ 0.58
CTDSP1-208ENST00000482272 DDX54Q8TDD1 881 aaKnown RBP18.68■□□□□ 0.58
CTDSP1-208ENST00000482272 DOT1LQ8TEK3 1739 aa18.67■□□□□ 0.58
CTDSP1-208ENST00000482272 STK32BQ9NY57 414 aa18.67■□□□□ 0.58
CTDSP1-208ENST00000482272 RTL1A6NKG5 1358 aa18.67■□□□□ 0.58
CTDSP1-208ENST00000482272 PAPPAQ13219 1627 aa18.67■□□□□ 0.58
CTDSP1-208ENST00000482272 PPP1R1BQ9UD71 204 aaPredicted RBP18.66■□□□□ 0.58
CTDSP1-208ENST00000482272 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
CTDSP1-208ENST00000482272 SLC15A2Q16348 729 aa18.64■□□□□ 0.57
CTDSP1-208ENST00000482272 PDGFDQ9GZP0 370 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-208ENST00000482272 HSPA5P11021 654 aaKnown RBP18.63■□□□□ 0.57
CTDSP1-208ENST00000482272 NBPF6Q5VWK0 638 aa18.63■□□□□ 0.57
CTDSP1-208ENST00000482272 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
CTDSP1-208ENST00000482272 ZCRB1Q8TBF4 217 aaKnown RBP18.63■□□□□ 0.57
CTDSP1-208ENST00000482272 NBPF4Q96M43 638 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms