RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	PSEN1	P49768	467 aa		12.59	□□□□□ -0.39
UBE2F-222	ENST00000482096	MYT1	Q01538	1121 aa		12.59	□□□□□ -0.39
UBE2F-222	ENST00000482096	NGDN	Q8NEJ9	315 aa	Known RBP	12.59	□□□□□ -0.39
UBE2F-222	ENST00000482096	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.59	□□□□□ -0.39
UBE2F-222	ENST00000482096	TRPC6	Q9Y210	931 aa		12.59	□□□□□ -0.39
UBE2F-222	ENST00000482096	TRPM3	Q9HCF6	1732 aa	Predicted RBP	12.59	□□□□□ -0.39
UBE2F-222	ENST00000482096	BAG6	P46379	1132 aa		12.58	□□□□□ -0.4
UBE2F-222	ENST00000482096	STK24	Q9Y6E0	443 aa		12.58	□□□□□ -0.4
UBE2F-222	ENST00000482096	SPATA31A5	Q5VU36	1347 aa		12.58	□□□□□ -0.4
UBE2F-222	ENST00000482096	SPATA31A7	Q8IWB4	1347 aa		12.58	□□□□□ -0.4
UBE2F-222	ENST00000482096	HRC	P23327	699 aa		12.57	□□□□□ -0.4
UBE2F-222	ENST00000482096	ALS2	Q96Q42	1657 aa		12.57	□□□□□ -0.4
UBE2F-222	ENST00000482096	NRAP	Q86VF7	1730 aa		12.57	□□□□□ -0.4
UBE2F-222	ENST00000482096	NUDT16	Q96DE0	195 aa	Known RBP	12.56	□□□□□ -0.4
UBE2F-222	ENST00000482096	PRDM11	Q9NQV5	511 aa		12.56	□□□□□ -0.4
UBE2F-222	ENST00000482096	COL14A1	Q05707	1796 aa	Known RBP	12.56	□□□□□ -0.4
UBE2F-222	ENST00000482096	FAM182B	Q5T319	152 aa		12.54	□□□□□ -0.4
UBE2F-222	ENST00000482096	ATP7B	P35670	1465 aa		12.53	□□□□□ -0.4
UBE2F-222	ENST00000482096	EN1	Q05925	392 aa	Predicted RBP	12.53	□□□□□ -0.4
UBE2F-222	ENST00000482096	BBX	Q8WY36	941 aa	Predicted RBP	12.53	□□□□□ -0.4
UBE2F-222	ENST00000482096	CDK19	Q9BWU1	502 aa		12.53	□□□□□ -0.4
UBE2F-222	ENST00000482096	SPATA31A1	Q5TZJ5	1347 aa		12.53	□□□□□ -0.4
UBE2F-222	ENST00000482096	KIAA0232	Q92628	1395 aa		12.53	□□□□□ -0.4
UBE2F-222	ENST00000482096	PSD	A5PKW4	1024 aa	Predicted RBP	12.52	□□□□□ -0.41
UBE2F-222	ENST00000482096	CHRNA2	Q15822	529 aa		12.52	□□□□□ -0.41
UBE2F-222	ENST00000482096	POLR3A	O14802	1390 aa	Predicted RBP	12.52	□□□□□ -0.41
UBE2F-222	ENST00000482096	CRYBG1	Q9Y4K1	1723 aa		12.51	□□□□□ -0.41
UBE2F-222	ENST00000482096	PLEKHG3	A1L390	1219 aa		12.51	□□□□□ -0.41
UBE2F-222	ENST00000482096	GABBR2	O75899	941 aa		12.51	□□□□□ -0.41
UBE2F-222	ENST00000482096	NBPF8	Q3BBV2	869 aa		12.51	□□□□□ -0.41
UBE2F-222	ENST00000482096	ACE	P12821	1306 aa		12.51	□□□□□ -0.41
UBE2F-222	ENST00000482096	DISP2	A7MBM2	1401 aa		12.51	□□□□□ -0.41
UBE2F-222	ENST00000482096	ZC3H6	P61129	1189 aa	Known RBP	12.5	□□□□□ -0.41
UBE2F-222	ENST00000482096	TMEM106C	Q9BVX2	250 aa		12.5	□□□□□ -0.41
UBE2F-222	ENST00000482096	STRN4	Q9NRL3	753 aa		12.5	□□□□□ -0.41
UBE2F-222	ENST00000482096	LRP5	O75197	1615 aa		12.5	□□□□□ -0.41
UBE2F-222	ENST00000482096	THSD7A	Q9UPZ6	1657 aa		12.5	□□□□□ -0.41
UBE2F-222	ENST00000482096	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.49	□□□□□ -0.41
UBE2F-222	ENST00000482096	CLCN6	P51797	869 aa		12.49	□□□□□ -0.41
UBE2F-222	ENST00000482096	NUTM2G	Q5VZR2	741 aa		12.49	□□□□□ -0.41
UBE2F-222	ENST00000482096	FAM196A	Q6ZSG2	479 aa		12.49	□□□□□ -0.41
UBE2F-222	ENST00000482096	EZH2	Q15910	746 aa	Known RBP	12.48	□□□□□ -0.41
UBE2F-222	ENST00000482096	BARGIN	Q6ZT62	677 aa		12.48	□□□□□ -0.41
UBE2F-222	ENST00000482096	CAMKK2	Q96RR4	588 aa		12.48	□□□□□ -0.41
UBE2F-222	ENST00000482096	ITSN1	Q15811	1721 aa		12.48	□□□□□ -0.41
UBE2F-222	ENST00000482096	TRIM37	O94972	964 aa		12.47	□□□□□ -0.41
UBE2F-222	ENST00000482096	EVA1C	P58658	441 aa		12.47	□□□□□ -0.41
UBE2F-222	ENST00000482096	R3HDM1	Q15032	1099 aa	Known RBP	12.47	□□□□□ -0.41
UBE2F-222	ENST00000482096	NBPF1	Q3BBV0	1214 aa		12.47	□□□□□ -0.41
UBE2F-222	ENST00000482096	ABTB2	Q8N961	1025 aa		12.47	□□□□□ -0.41
UBE2F-222	ENST00000482096	SP7	Q8TDD2	431 aa	Predicted RBP	12.47	□□□□□ -0.41
UBE2F-222	ENST00000482096	CABP2	Q9NPB3	220 aa		12.47	□□□□□ -0.41
UBE2F-222	ENST00000482096	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.47	□□□□□ -0.41
UBE2F-222	ENST00000482096	RGPD1	P0DJD0	1748 aa		12.47	□□□□□ -0.41
UBE2F-222	ENST00000482096	SSH2	Q76I76	1423 aa		12.46	□□□□□ -0.41
UBE2F-222	ENST00000482096	CPD	O75976	1380 aa		12.46	□□□□□ -0.41
UBE2F-222	ENST00000482096	USP19	O94966	1318 aa		12.46	□□□□□ -0.41
UBE2F-222	ENST00000482096	NKX1-1	Q15270	411 aa	Predicted RBP	12.46	□□□□□ -0.41
UBE2F-222	ENST00000482096	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.46	□□□□□ -0.41
UBE2F-222	ENST00000482096	USP35	Q9P2H5	1018 aa		12.46	□□□□□ -0.41
UBE2F-222	ENST00000482096	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.45	□□□□□ -0.42
UBE2F-222	ENST00000482096	TIE1	P35590	1138 aa		12.45	□□□□□ -0.42
UBE2F-222	ENST00000482096	LARP1	Q6PKG0	1096 aa	Known RBP	12.45	□□□□□ -0.42
UBE2F-222	ENST00000482096	NLRP13	Q86W25	1043 aa		12.45	□□□□□ -0.42
UBE2F-222	ENST00000482096	PARD3	Q8TEW0	1356 aa		12.44	□□□□□ -0.42
UBE2F-222	ENST00000482096	TTLL13P	A6NNM8	815 aa		12.44	□□□□□ -0.42
UBE2F-222	ENST00000482096	APBA3	O96018	575 aa		12.44	□□□□□ -0.42
UBE2F-222	ENST00000482096	GC	P02774	474 aa		12.44	□□□□□ -0.42
UBE2F-222	ENST00000482096	PDE3B	Q13370	1112 aa		12.44	□□□□□ -0.42
UBE2F-222	ENST00000482096	TCP11L2	Q8N4U5	519 aa		12.44	□□□□□ -0.42
UBE2F-222	ENST00000482096	TOPAZ1	Q8N9V7	1692 aa		12.44	□□□□□ -0.42
UBE2F-222	ENST00000482096	CAMTA1	Q9Y6Y1	1673 aa		12.44	□□□□□ -0.42
UBE2F-222	ENST00000482096	BRD4	O60885	1362 aa	Predicted RBP	12.43	□□□□□ -0.42
UBE2F-222	ENST00000482096	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.43	□□□□□ -0.42
UBE2F-222	ENST00000482096	TNS1	Q9HBL0	1735 aa	Known RBP	12.43	□□□□□ -0.42
UBE2F-222	ENST00000482096	KIAA1210	Q9ULL0	1709 aa		12.43	□□□□□ -0.42
UBE2F-222	ENST00000482096	SRPK2	P78362	688 aa	Known RBP	12.43	□□□□□ -0.42
UBE2F-222	ENST00000482096	THRAP3	Q9Y2W1	955 aa	Known RBP	12.43	□□□□□ -0.42
UBE2F-222	ENST00000482096	PLCB2	Q00722	1185 aa		12.42	□□□□□ -0.42
UBE2F-222	ENST00000482096	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.42	□□□□□ -0.42
UBE2F-222	ENST00000482096	PPIP5K1	Q6PFW1	1433 aa		12.42	□□□□□ -0.42
UBE2F-222	ENST00000482096	NRK	Q7Z2Y5	1582 aa		12.42	□□□□□ -0.42
UBE2F-222	ENST00000482096	EFCAB3	Q8N7B9	438 aa		12.41	□□□□□ -0.42
UBE2F-222	ENST00000482096	CFAP44	Q96MT7	982 aa		12.41	□□□□□ -0.42
UBE2F-222	ENST00000482096	LMO7	Q8WWI1	1683 aa		12.41	□□□□□ -0.42
UBE2F-222	ENST00000482096	CABP1	Q9NZU7	370 aa		12.4	□□□□□ -0.42
UBE2F-222	ENST00000482096	C11orf95	C9JLR9	678 aa	Predicted RBP	12.39	□□□□□ -0.43
UBE2F-222	ENST00000482096	NLRP6	P59044	892 aa		12.39	□□□□□ -0.43
UBE2F-222	ENST00000482096	COL5A2	P05997	1499 aa	Predicted RBP	12.39	□□□□□ -0.43
UBE2F-222	ENST00000482096	USP6	P35125	1406 aa		12.38	□□□□□ -0.43
UBE2F-222	ENST00000482096	GOLGA2	Q08379	1002 aa		12.38	□□□□□ -0.43
UBE2F-222	ENST00000482096	NBPF14	Q5TI25	921 aa		12.38	□□□□□ -0.43
UBE2F-222	ENST00000482096	AATK	Q6ZMQ8	1374 aa		12.38	□□□□□ -0.43
UBE2F-222	ENST00000482096	CRB1	P82279	1406 aa		12.37	□□□□□ -0.43
UBE2F-222	ENST00000482096	ATN1	P54259	1190 aa	Predicted RBP	12.37	□□□□□ -0.43
UBE2F-222	ENST00000482096	TRIM35	Q9UPQ4	493 aa		12.37	□□□□□ -0.43
UBE2F-222	ENST00000482096	ATMIN	O43313	823 aa	Predicted RBP	12.36	□□□□□ -0.43
UBE2F-222	ENST00000482096	SPRYD3	Q8NCJ5	442 aa		12.36	□□□□□ -0.43
UBE2F-222	ENST00000482096	L3MBTL2	Q969R5	705 aa		12.36	□□□□□ -0.43
UBE2F-222	ENST00000482096	DCBLD2	Q96PD2	775 aa		12.36	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms