RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 NME9Q86XW9 330 aa14.76□□□□□ -0.05
SSBP1-210ENST00000481508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.76□□□□□ -0.05
SSBP1-210ENST00000481508 NUP188Q5SRE5 1749 aa14.75□□□□□ -0.05
SSBP1-210ENST00000481508 HDGFL2Q7Z4V5 671 aaPredicted RBP14.75□□□□□ -0.05
SSBP1-210ENST00000481508 POLR3GLQ9BT43 218 aa14.75□□□□□ -0.05
SSBP1-210ENST00000481508 UTRNP46939 3433 aa14.75□□□□□ -0.05
SSBP1-210ENST00000481508 NFAT5O94916 1531 aa14.75□□□□□ -0.05
SSBP1-210ENST00000481508 COL18A1P39060 1754 aa14.75□□□□□ -0.05
SSBP1-210ENST00000481508 RGPD5Q99666 1765 aa14.75□□□□□ -0.05
SSBP1-210ENST00000481508 LMO7Q8WWI1 1683 aa14.74□□□□□ -0.05
SSBP1-210ENST00000481508 RREB1Q92766 1687 aa14.74□□□□□ -0.05
SSBP1-210ENST00000481508 TTC21AQ8NDW8 1320 aa14.74□□□□□ -0.05
SSBP1-210ENST00000481508 FAM83GA6ND36 823 aa14.74□□□□□ -0.05
SSBP1-210ENST00000481508 HAP1P54257 671 aaPredicted RBP14.74□□□□□ -0.05
SSBP1-210ENST00000481508 CDCA8Q53HL2 280 aa14.74□□□□□ -0.05
SSBP1-210ENST00000481508 CARD14Q9BXL6 1004 aa14.74□□□□□ -0.05
SSBP1-210ENST00000481508 TERF2IPQ9NYB0 399 aa14.74□□□□□ -0.05
SSBP1-210ENST00000481508 KIAA0232Q92628 1395 aa14.73□□□□□ -0.05
SSBP1-210ENST00000481508 LTN1O94822 1766 aa14.73□□□□□ -0.05
SSBP1-210ENST00000481508 NLRP6P59044 892 aa14.73□□□□□ -0.05
SSBP1-210ENST00000481508 SEPT12Q8IYM1 358 aa14.73□□□□□ -0.05
SSBP1-210ENST00000481508 OVOS2A0A0J9YW53 1432 aa14.73□□□□□ -0.05
SSBP1-210ENST00000481508 OVOS2Q6IE36 1432 aa14.73□□□□□ -0.05
SSBP1-210ENST00000481508 KIF7Q2M1P5 1343 aa14.72□□□□□ -0.05
SSBP1-210ENST00000481508 ZC3H6P61129 1189 aaKnown RBP14.72□□□□□ -0.05
SSBP1-210ENST00000481508 NLRP13Q86W25 1043 aa14.72□□□□□ -0.05
SSBP1-210ENST00000481508 USP31Q70CQ4 1352 aa14.72□□□□□ -0.05
SSBP1-210ENST00000481508 CHRNA2Q15822 529 aa14.71□□□□□ -0.05
SSBP1-210ENST00000481508 UNC5CLQ8IV45 518 aa14.71□□□□□ -0.05
SSBP1-210ENST00000481508 NSD3Q9BZ95 1437 aa14.71□□□□□ -0.05
SSBP1-210ENST00000481508 GCP02774 474 aa14.7□□□□□ -0.06
SSBP1-210ENST00000481508 EN1Q05925 392 aaPredicted RBP14.7□□□□□ -0.06
SSBP1-210ENST00000481508 IFFO2Q5TF58 517 aa14.7□□□□□ -0.06
SSBP1-210ENST00000481508 POTEHQ6S545 545 aa14.7□□□□□ -0.06
SSBP1-210ENST00000481508 CHD4Q14839 1912 aa14.7□□□□□ -0.06
SSBP1-210ENST00000481508 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
SSBP1-210ENST00000481508 SOX12O15370 315 aa14.69□□□□□ -0.06
SSBP1-210ENST00000481508 BAG6P46379 1132 aa14.69□□□□□ -0.06
SSBP1-210ENST00000481508 CPDO75976 1380 aa14.69□□□□□ -0.06
SSBP1-210ENST00000481508 KRT27Q7Z3Y8 459 aa14.68□□□□□ -0.06
SSBP1-210ENST00000481508 PRDM11Q9NQV5 511 aa14.68□□□□□ -0.06
SSBP1-210ENST00000481508 CCDC7Q96M83 1385 aa14.68□□□□□ -0.06
SSBP1-210ENST00000481508 CEP350Q5VT06 3117 aa14.68□□□□□ -0.06
SSBP1-210ENST00000481508 WASHC2AQ641Q2 1341 aa14.67□□□□□ -0.06
SSBP1-210ENST00000481508 FAM182BQ5T319 152 aa14.67□□□□□ -0.06
SSBP1-210ENST00000481508 FYB1O15117 783 aa14.66□□□□□ -0.06
SSBP1-210ENST00000481508 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
SSBP1-210ENST00000481508 GGNBP2Q9H3C7 697 aa14.66□□□□□ -0.06
SSBP1-210ENST00000481508 BTG4Q9NY30 223 aa14.66□□□□□ -0.06
SSBP1-210ENST00000481508 THSD7AQ9UPZ6 1657 aa14.65□□□□□ -0.06
SSBP1-210ENST00000481508 SENP3-EIF4A1A0A087X0R7 540 aa14.65□□□□□ -0.06
SSBP1-210ENST00000481508 ZBTB7CA1YPR0 619 aa14.65□□□□□ -0.06
SSBP1-210ENST00000481508 FBLN1P23142 703 aa14.65□□□□□ -0.06
SSBP1-210ENST00000481508 PANK3Q9H999 370 aa14.65□□□□□ -0.06
SSBP1-210ENST00000481508 PEAK1Q9H792 1746 aa14.64□□□□□ -0.07
SSBP1-210ENST00000481508 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-210ENST00000481508 COL5A2P05997 1499 aaPredicted RBP14.63□□□□□ -0.07
SSBP1-210ENST00000481508 A0A0G2JS52 829 aa14.63□□□□□ -0.07
SSBP1-210ENST00000481508 MYT1Q01538 1121 aa14.63□□□□□ -0.07
SSBP1-210ENST00000481508 ARHGEF25Q86VW2 580 aa14.63□□□□□ -0.07
SSBP1-210ENST00000481508 AXIN2Q9Y2T1 843 aa14.63□□□□□ -0.07
SSBP1-210ENST00000481508 CCDC9Q9Y3X0 531 aaKnown RBP14.63□□□□□ -0.07
SSBP1-210ENST00000481508 AATKQ6ZMQ8 1374 aa14.62□□□□□ -0.07
SSBP1-210ENST00000481508 MAP2P11137 1827 aaKnown RBP14.62□□□□□ -0.07
SSBP1-210ENST00000481508 WNK3Q9BYP7 1800 aa14.62□□□□□ -0.07
SSBP1-210ENST00000481508 DISP2A7MBM2 1401 aa14.62□□□□□ -0.07
SSBP1-210ENST00000481508 EZH2Q15910 746 aaKnown RBP14.62□□□□□ -0.07
SSBP1-210ENST00000481508 RGPD2P0DJD1 1756 aa14.62□□□□□ -0.07
SSBP1-210ENST00000481508 VPS72Q15906 364 aa14.61□□□□□ -0.07
SSBP1-210ENST00000481508 KCNH5Q8NCM2 988 aa14.61□□□□□ -0.07
SSBP1-210ENST00000481508 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
SSBP1-210ENST00000481508 ABCC6O95255 1503 aa14.61□□□□□ -0.07
SSBP1-210ENST00000481508 COG3Q96JB2 828 aa14.6□□□□□ -0.07
SSBP1-210ENST00000481508 LARP1Q6PKG0 1096 aaKnown RBP14.59□□□□□ -0.07
SSBP1-210ENST00000481508 MAP3K19Q56UN5 1328 aa14.59□□□□□ -0.07
SSBP1-210ENST00000481508 SPATA31A5Q5VU36 1347 aa14.59□□□□□ -0.07
SSBP1-210ENST00000481508 SPATA31A7Q8IWB4 1347 aa14.59□□□□□ -0.07
SSBP1-210ENST00000481508 FAM98CQ17RN3 349 aaKnown RBP14.58□□□□□ -0.08
SSBP1-210ENST00000481508 CGNL1Q0VF96 1302 aa14.58□□□□□ -0.08
SSBP1-210ENST00000481508 CASZ1Q86V15 1759 aa14.57□□□□□ -0.08
SSBP1-210ENST00000481508 ONECUT3O60422 494 aaPredicted RBP14.57□□□□□ -0.08
SSBP1-210ENST00000481508 ZEB1P37275 1124 aaPredicted RBP14.57□□□□□ -0.08
SSBP1-210ENST00000481508 RRS1Q15050 365 aaKnown RBP14.57□□□□□ -0.08
SSBP1-210ENST00000481508 ZNF784Q8NCA9 323 aaPredicted RBP14.57□□□□□ -0.08
SSBP1-210ENST00000481508 SPATA31A1Q5TZJ5 1347 aa14.57□□□□□ -0.08
SSBP1-210ENST00000481508 PER1O15534 1290 aaPredicted RBP14.55□□□□□ -0.08
SSBP1-210ENST00000481508 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
SSBP1-210ENST00000481508 EVA1CP58658 441 aa14.54□□□□□ -0.08
SSBP1-210ENST00000481508 CRB1P82279 1406 aa14.54□□□□□ -0.08
SSBP1-210ENST00000481508 FAM208AQ9UK61 1670 aaKnown RBP14.54□□□□□ -0.08
SSBP1-210ENST00000481508 PARP4Q9UKK3 1724 aaKnown RBP14.53□□□□□ -0.08
SSBP1-210ENST00000481508 LRRC37A3O60309 1634 aa14.53□□□□□ -0.08
SSBP1-210ENST00000481508 WDR17Q8IZU2 1322 aa14.53□□□□□ -0.08
SSBP1-210ENST00000481508 HOXC9P31274 260 aa14.53□□□□□ -0.08
SSBP1-210ENST00000481508 CAMKK2Q96RR4 588 aa14.53□□□□□ -0.08
SSBP1-210ENST00000481508 USP35Q9P2H5 1018 aa14.53□□□□□ -0.08
SSBP1-210ENST00000481508 EMILIN1Q9Y6C2 1016 aa14.53□□□□□ -0.08
SSBP1-210ENST00000481508 NSD2O96028 1365 aa14.52□□□□□ -0.08
SSBP1-210ENST00000481508 ERBB3P21860 1342 aa14.52□□□□□ -0.08
SSBP1-210ENST00000481508 TNNT2P45379 298 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms