RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 ZBTB7CA1YPR0 619 aa18.2■□□□□ 0.5
HDAC1-207ENST00000481281 SOX12O15370 315 aa18.2■□□□□ 0.5
HDAC1-207ENST00000481281 BARGINQ6ZT62 677 aa18.2■□□□□ 0.5
HDAC1-207ENST00000481281 KRT27Q7Z3Y8 459 aa18.2■□□□□ 0.5
HDAC1-207ENST00000481281 WNK3Q9BYP7 1800 aa18.2■□□□□ 0.5
HDAC1-207ENST00000481281 KIF20BQ96Q89 1820 aa18.19■□□□□ 0.5
HDAC1-207ENST00000481281 A0A0G2JS52 829 aa18.19■□□□□ 0.5
HDAC1-207ENST00000481281 MYT1Q01538 1121 aa18.19■□□□□ 0.5
HDAC1-207ENST00000481281 PARP4Q9UKK3 1724 aaKnown RBP18.19■□□□□ 0.5
HDAC1-207ENST00000481281 AXIN2Q9Y2T1 843 aa18.19■□□□□ 0.5
HDAC1-207ENST00000481281 HSPA5P11021 654 aaKnown RBP18.18■□□□□ 0.5
HDAC1-207ENST00000481281 BLMP54132 1417 aaPredicted RBP18.17■□□□□ 0.5
HDAC1-207ENST00000481281 CCDC125Q86Z20 511 aa18.17■□□□□ 0.5
HDAC1-207ENST00000481281 TCP11L2Q8N4U5 519 aa18.17■□□□□ 0.5
HDAC1-207ENST00000481281 USP35Q9P2H5 1018 aa18.17■□□□□ 0.5
HDAC1-207ENST00000481281 THRAP3Q9Y2W1 955 aaKnown RBP18.17■□□□□ 0.5
HDAC1-207ENST00000481281 WDR17Q8IZU2 1322 aa18.17■□□□□ 0.5
HDAC1-207ENST00000481281 LRRC37A3O60309 1634 aa18.14■□□□□ 0.49
HDAC1-207ENST00000481281 COG3Q96JB2 828 aa18.14■□□□□ 0.49
HDAC1-207ENST00000481281 FYB1O15117 783 aa18.13■□□□□ 0.49
HDAC1-207ENST00000481281 TOM1L2Q6ZVM7 507 aa18.13■□□□□ 0.49
HDAC1-207ENST00000481281 CARD14Q9BXL6 1004 aa18.13■□□□□ 0.49
HDAC1-207ENST00000481281 RGPD1P0DJD0 1748 aa18.12■□□□□ 0.49
HDAC1-207ENST00000481281 NSD3Q9BZ95 1437 aa18.12■□□□□ 0.49
HDAC1-207ENST00000481281 ERBB3P21860 1342 aa18.11■□□□□ 0.49
HDAC1-207ENST00000481281 FAM208AQ9UK61 1670 aaKnown RBP18.11■□□□□ 0.49
HDAC1-207ENST00000481281 TNS1Q9HBL0 1735 aaKnown RBP18.1■□□□□ 0.49
HDAC1-207ENST00000481281 DISP2A7MBM2 1401 aa18.1■□□□□ 0.49
HDAC1-207ENST00000481281 CARD10Q9BWT7 1032 aa18.1■□□□□ 0.49
HDAC1-207ENST00000481281 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
HDAC1-207ENST00000481281 CCDC7Q96M83 1385 aa18.09■□□□□ 0.49
HDAC1-207ENST00000481281 CSB-PGBD3P0DP91 1061 aa18.09■□□□□ 0.49
HDAC1-207ENST00000481281 FAM182BQ5T319 152 aa18.09■□□□□ 0.49
HDAC1-207ENST00000481281 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
HDAC1-207ENST00000481281 MAP3K19Q56UN5 1328 aa18.08■□□□□ 0.49
HDAC1-207ENST00000481281 RTL1A6NKG5 1358 aa18.07■□□□□ 0.48
HDAC1-207ENST00000481281 ANKRD26Q9UPS8 1709 aa18.07■□□□□ 0.48
HDAC1-207ENST00000481281 IP6K1Q92551 441 aa18.07■□□□□ 0.48
HDAC1-207ENST00000481281 CDCA7Q9BWT1 371 aaPredicted RBP18.07■□□□□ 0.48
HDAC1-207ENST00000481281 PDE3BQ13370 1112 aa18.06■□□□□ 0.48
HDAC1-207ENST00000481281 ANKRD24Q8TF21 1146 aa18.06■□□□□ 0.48
HDAC1-207ENST00000481281 POLR3GLQ9BT43 218 aa18.06■□□□□ 0.48
HDAC1-207ENST00000481281 C11orf95C9JLR9 678 aaPredicted RBP18.05■□□□□ 0.48
HDAC1-207ENST00000481281 FBLN1P23142 703 aa18.05■□□□□ 0.48
HDAC1-207ENST00000481281 FAM196AQ6ZSG2 479 aa18.05■□□□□ 0.48
HDAC1-207ENST00000481281 HOXC9P31274 260 aa18.04■□□□□ 0.48
HDAC1-207ENST00000481281 SF3B2Q13435 895 aaKnown RBP18.04■□□□□ 0.48
HDAC1-207ENST00000481281 CGNL1Q0VF96 1302 aa18.03■□□□□ 0.48
HDAC1-207ENST00000481281 DDB1Q16531 1140 aa18.03■□□□□ 0.48
HDAC1-207ENST00000481281 DEFB132Q7Z7B7 95 aa18.03■□□□□ 0.48
HDAC1-207ENST00000481281 OVOS2A0A0G2JMS6 1433 aa18.03■□□□□ 0.48
HDAC1-207ENST00000481281 SBF2Q86WG5 1849 aa18.02■□□□□ 0.48
HDAC1-207ENST00000481281 RGPD2P0DJD1 1756 aa18.02■□□□□ 0.48
HDAC1-207ENST00000481281 TNS2Q63HR2 1409 aa18.02■□□□□ 0.48
HDAC1-207ENST00000481281 NLRP2Q9NX02 1062 aa18.02■□□□□ 0.48
HDAC1-207ENST00000481281 KIF24Q5T7B8 1368 aa18.02■□□□□ 0.47
HDAC1-207ENST00000481281 AMPHP49418 695 aa18.01■□□□□ 0.47
HDAC1-207ENST00000481281 RRS1Q15050 365 aaKnown RBP18.01■□□□□ 0.47
HDAC1-207ENST00000481281 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
HDAC1-207ENST00000481281 BCL9O00512 1426 aa18■□□□□ 0.47
HDAC1-207ENST00000481281 BAG6P46379 1132 aa18■□□□□ 0.47
HDAC1-207ENST00000481281 PANK3Q9H999 370 aa18■□□□□ 0.47
HDAC1-207ENST00000481281 TRIM37O94972 964 aa17.99■□□□□ 0.47
HDAC1-207ENST00000481281 FLT4P35916 1363 aa17.99■□□□□ 0.47
HDAC1-207ENST00000481281 MAP2P11137 1827 aaKnown RBP17.98■□□□□ 0.47
HDAC1-207ENST00000481281 INSRP06213 1382 aa17.98■□□□□ 0.47
HDAC1-207ENST00000481281 NSD2O96028 1365 aa17.97■□□□□ 0.47
HDAC1-207ENST00000481281 IL2RBP14784 551 aa17.97■□□□□ 0.47
HDAC1-207ENST00000481281 MARCH10Q8NA82 808 aaPredicted RBP17.97■□□□□ 0.47
HDAC1-207ENST00000481281 LTV1Q96GA3 475 aaPredicted RBP17.97■□□□□ 0.47
HDAC1-207ENST00000481281 EXOC5O00471 708 aa17.96■□□□□ 0.47
HDAC1-207ENST00000481281 SMG6Q86US8 1419 aaKnown RBP17.96■□□□□ 0.47
HDAC1-207ENST00000481281 RREB1Q92766 1687 aa17.96■□□□□ 0.47
HDAC1-207ENST00000481281 RGPD3A6NKT7 1758 aaPredicted RBP17.95■□□□□ 0.46
HDAC1-207ENST00000481281 RGPD4Q7Z3J3 1758 aa17.95■□□□□ 0.46
HDAC1-207ENST00000481281 HSP90AB2PQ58FF8 381 aa17.95■□□□□ 0.46
HDAC1-207ENST00000481281 EMILIN1Q9Y6C2 1016 aa17.95■□□□□ 0.46
HDAC1-207ENST00000481281 PARD3Q8TEW0 1356 aa17.94■□□□□ 0.46
HDAC1-207ENST00000481281 EN1Q05925 392 aaPredicted RBP17.94■□□□□ 0.46
HDAC1-207ENST00000481281 SHANK3Q9BYB0 1731 aa17.94■□□□□ 0.46
HDAC1-207ENST00000481281 NHSQ6T4R5 1651 aa17.93■□□□□ 0.46
HDAC1-207ENST00000481281 MEGF6O75095 1541 aa17.93■□□□□ 0.46
HDAC1-207ENST00000481281 NBPF6Q5VWK0 638 aa17.92■□□□□ 0.46
HDAC1-207ENST00000481281 NBPF4Q96M43 638 aa17.92■□□□□ 0.46
HDAC1-207ENST00000481281 CAMKK2Q96RR4 588 aa17.92■□□□□ 0.46
HDAC1-207ENST00000481281 NCAPD2Q15021 1401 aa17.91■□□□□ 0.46
HDAC1-207ENST00000481281 APBA3O96018 575 aa17.91■□□□□ 0.46
HDAC1-207ENST00000481281 POLKQ9UBT6 870 aa17.91■□□□□ 0.46
HDAC1-207ENST00000481281 NUP188Q5SRE5 1749 aa17.91■□□□□ 0.46
HDAC1-207ENST00000481281 WASHC2AQ641Q2 1341 aa17.91■□□□□ 0.46
HDAC1-207ENST00000481281 EZH2Q15910 746 aaKnown RBP17.89■□□□□ 0.45
HDAC1-207ENST00000481281 BCL11BQ9C0K0 894 aaPredicted RBP17.89■□□□□ 0.45
HDAC1-207ENST00000481281 KNSTRNQ9Y448 316 aa17.89■□□□□ 0.45
HDAC1-207ENST00000481281 AMER1Q5JTC6 1135 aaPredicted RBP17.88■□□□□ 0.45
HDAC1-207ENST00000481281 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
HDAC1-207ENST00000481281 TNNT2P45379 298 aaPredicted RBP17.87■□□□□ 0.45
HDAC1-207ENST00000481281 PTF1AQ7RTS3 328 aa17.87■□□□□ 0.45
HDAC1-207ENST00000481281 USHBP1Q8N6Y0 703 aa17.87■□□□□ 0.45
HDAC1-207ENST00000481281 PER1O15534 1290 aaPredicted RBP17.86■□□□□ 0.45
HDAC1-207ENST00000481281 PKD1L3Q7Z443 1732 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms