RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 VAC14Q08AM6 782 aa11.96□□□□□ -0.49
GTF3C3-211ENST00000481098 PKDCCQ504Y2 493 aa11.96□□□□□ -0.49
GTF3C3-211ENST00000481098 ESPNB1AK53 854 aa11.95□□□□□ -0.5
GTF3C3-211ENST00000481098 SOX11P35716 441 aa11.95□□□□□ -0.5
GTF3C3-211ENST00000481098 KCTD15Q96SI1 283 aaPredicted RBP11.95□□□□□ -0.5
GTF3C3-211ENST00000481098 PCDHB9Q9Y5E1 797 aa11.95□□□□□ -0.5
GTF3C3-211ENST00000481098 FSHRP23945 695 aa11.94□□□□□ -0.5
GTF3C3-211ENST00000481098 NNTQ13423 1086 aa11.94□□□□□ -0.5
GTF3C3-211ENST00000481098 SEPT12Q8IYM1 358 aa11.94□□□□□ -0.5
GTF3C3-211ENST00000481098 CRIPAKQ8N1N5 446 aa11.94□□□□□ -0.5
GTF3C3-211ENST00000481098 HPS1Q92902 700 aa11.93□□□□□ -0.5
GTF3C3-211ENST00000481098 NR3C2P08235 984 aa11.92□□□□□ -0.5
GTF3C3-211ENST00000481098 SMCPP49901 116 aaPredicted RBP11.92□□□□□ -0.5
GTF3C3-211ENST00000481098 INTS6LQ5JSJ4 861 aaKnown RBP11.92□□□□□ -0.5
GTF3C3-211ENST00000481098 KLF16Q9BXK1 252 aaPredicted RBP11.92□□□□□ -0.5
GTF3C3-211ENST00000481098 CTC1Q2NKJ3 1217 aa11.91□□□□□ -0.5
GTF3C3-211ENST00000481098 CCDC125Q86Z20 511 aa11.91□□□□□ -0.5
GTF3C3-211ENST00000481098 MYT1Q01538 1121 aa11.89□□□□□ -0.51
GTF3C3-211ENST00000481098 CCDC116Q8IYX3 515 aa11.89□□□□□ -0.51
GTF3C3-211ENST00000481098 GIGYF1O75420 1035 aaPredicted RBP11.88□□□□□ -0.51
GTF3C3-211ENST00000481098 DHX9Q08211 1270 aaKnown RBP11.88□□□□□ -0.51
GTF3C3-211ENST00000481098 ALG2Q9H553 416 aa11.88□□□□□ -0.51
GTF3C3-211ENST00000481098 CEP126Q9P2H0 1117 aa11.88□□□□□ -0.51
GTF3C3-211ENST00000481098 POM121CA8CG34 1229 aa11.87□□□□□ -0.51
GTF3C3-211ENST00000481098 LCE2BO14633 110 aa11.87□□□□□ -0.51
GTF3C3-211ENST00000481098 RNF20Q5VTR2 975 aa11.87□□□□□ -0.51
GTF3C3-211ENST00000481098 Q6ZNB5 142 aa11.87□□□□□ -0.51
GTF3C3-211ENST00000481098 ZMYND15Q9H091 742 aa11.87□□□□□ -0.51
GTF3C3-211ENST00000481098 EMILIN1Q9Y6C2 1016 aa11.87□□□□□ -0.51
GTF3C3-211ENST00000481098 TRAK2O60296 914 aa11.86□□□□□ -0.51
GTF3C3-211ENST00000481098 TIMP2P16035 220 aa11.86□□□□□ -0.51
GTF3C3-211ENST00000481098 SEMA3FQ13275 785 aa11.86□□□□□ -0.51
GTF3C3-211ENST00000481098 PPP1R26Q5T8A7 1209 aaPredicted RBP11.85□□□□□ -0.51
GTF3C3-211ENST00000481098 WDR4P57081 412 aaKnown RBP11.84□□□□□ -0.51
GTF3C3-211ENST00000481098 PHTF2Q8N3S3 785 aa11.84□□□□□ -0.51
GTF3C3-211ENST00000481098 ADAMTS19Q8TE59 1207 aa11.84□□□□□ -0.51
GTF3C3-211ENST00000481098 AAASQ9NRG9 546 aa11.84□□□□□ -0.51
GTF3C3-211ENST00000481098 ERVH48-1M5A8F1 160 aa11.83□□□□□ -0.52
GTF3C3-211ENST00000481098 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.52
GTF3C3-211ENST00000481098 ITPKCQ96DU7 683 aa11.83□□□□□ -0.52
GTF3C3-211ENST00000481098 CHIC2Q9UKJ5 165 aa11.83□□□□□ -0.52
GTF3C3-211ENST00000481098 AXIN1O15169 862 aa11.82□□□□□ -0.52
GTF3C3-211ENST00000481098 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
GTF3C3-211ENST00000481098 PGPEP1Q9NXJ5 209 aa11.82□□□□□ -0.52
GTF3C3-211ENST00000481098 ZIC2O95409 532 aaPredicted RBP11.81□□□□□ -0.52
GTF3C3-211ENST00000481098 TRIM52Q96A61 297 aa11.81□□□□□ -0.52
GTF3C3-211ENST00000481098 CAPN5O15484 640 aaPredicted RBP11.8□□□□□ -0.52
GTF3C3-211ENST00000481098 ZFAND3Q9H8U3 227 aa11.8□□□□□ -0.52
GTF3C3-211ENST00000481098 ST8SIA5O15466 376 aa11.79□□□□□ -0.52
GTF3C3-211ENST00000481098 SLFNL1Q499Z3 407 aa11.79□□□□□ -0.52
GTF3C3-211ENST00000481098 C14orf37Q86TY3 774 aa11.79□□□□□ -0.52
GTF3C3-211ENST00000481098 NFATC2IPQ8NCF5 419 aa11.79□□□□□ -0.52
GTF3C3-211ENST00000481098 HDGFL1Q5TGJ6 251 aa11.78□□□□□ -0.52
GTF3C3-211ENST00000481098 Q6ZVU0 165 aa11.78□□□□□ -0.52
GTF3C3-211ENST00000481098 ZNF784Q8NCA9 323 aaPredicted RBP11.78□□□□□ -0.52
GTF3C3-211ENST00000481098 GLMNQ92990 594 aa11.78□□□□□ -0.52
GTF3C3-211ENST00000481098 LILRA1O75019 489 aa11.77□□□□□ -0.53
GTF3C3-211ENST00000481098 RAB15P59190 212 aa11.77□□□□□ -0.53
GTF3C3-211ENST00000481098 RNF135Q8IUD6 432 aa11.77□□□□□ -0.53
GTF3C3-211ENST00000481098 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
GTF3C3-211ENST00000481098 ERVK-9P63128 1117 aa11.76□□□□□ -0.53
GTF3C3-211ENST00000481098 MEIOBQ8N635 442 aa11.76□□□□□ -0.53
GTF3C3-211ENST00000481098 TMPRSS4Q9NRS4 437 aa11.76□□□□□ -0.53
GTF3C3-211ENST00000481098 MAP7D1Q3KQU3 841 aa11.75□□□□□ -0.53
GTF3C3-211ENST00000481098 UCN2Q96RP3 112 aa11.74□□□□□ -0.53
GTF3C3-211ENST00000481098 PCDHB11Q9Y5F2 797 aa11.74□□□□□ -0.53
GTF3C3-211ENST00000481098 PIK3CDO00329 1044 aa11.73□□□□□ -0.53
GTF3C3-211ENST00000481098 ATP13A2Q9NQ11 1180 aa11.73□□□□□ -0.53
GTF3C3-211ENST00000481098 CC2D2BQ6DHV5 1058 aa11.72□□□□□ -0.53
GTF3C3-211ENST00000481098 PLPP7Q8NBV4 271 aa11.72□□□□□ -0.53
GTF3C3-211ENST00000481098 DOLKQ9UPQ8 538 aa11.72□□□□□ -0.53
GTF3C3-211ENST00000481098 CBLBQ13191 982 aa11.71□□□□□ -0.53
GTF3C3-211ENST00000481098 TSGA10IPQ3SY00 556 aa11.71□□□□□ -0.53
GTF3C3-211ENST00000481098 TRIM46Q7Z4K8 759 aa11.71□□□□□ -0.53
GTF3C3-211ENST00000481098 CALR3Q96L12 384 aaKnown RBP11.71□□□□□ -0.53
GTF3C3-211ENST00000481098 CYLDQ9NQC7 956 aa11.71□□□□□ -0.53
GTF3C3-211ENST00000481098 DACH1Q9UI36 760 aa11.71□□□□□ -0.53
GTF3C3-211ENST00000481098 ZNF777Q9ULD5 760 aaPredicted RBP11.71□□□□□ -0.53
GTF3C3-211ENST00000481098 LZTS3O60299 673 aaPredicted RBP11.7□□□□□ -0.54
GTF3C3-211ENST00000481098 ADD1P35611 737 aaKnown RBP11.7□□□□□ -0.54
GTF3C3-211ENST00000481098 MRPL14Q6P1L8 145 aaKnown RBP11.7□□□□□ -0.54
GTF3C3-211ENST00000481098 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
GTF3C3-211ENST00000481098 ADH1AP07327 375 aa11.69□□□□□ -0.54
GTF3C3-211ENST00000481098 SCTRP47872 440 aa11.69□□□□□ -0.54
GTF3C3-211ENST00000481098 TSEN34Q9BSV6 310 aaKnown RBP11.69□□□□□ -0.54
GTF3C3-211ENST00000481098 BMP1P13497 986 aa11.68□□□□□ -0.54
GTF3C3-211ENST00000481098 LINC00528Q8N1L1 170 aa11.68□□□□□ -0.54
GTF3C3-211ENST00000481098 ATP9BO43861 1147 aa11.67□□□□□ -0.54
GTF3C3-211ENST00000481098 SKIP12755 728 aa11.67□□□□□ -0.54
GTF3C3-211ENST00000481098 USP4Q13107 963 aa11.67□□□□□ -0.54
GTF3C3-211ENST00000481098 PLEKHM2Q8IWE5 1019 aa11.67□□□□□ -0.54
GTF3C3-211ENST00000481098 KDF1Q8NAX2 398 aaPredicted RBP11.67□□□□□ -0.54
GTF3C3-211ENST00000481098 TIMELESSQ9UNS1 1208 aa11.67□□□□□ -0.54
GTF3C3-211ENST00000481098 MYCP01106 439 aaPredicted RBP11.66□□□□□ -0.54
GTF3C3-211ENST00000481098 TBC1D9Q6ZT07 1266 aa11.66□□□□□ -0.54
GTF3C3-211ENST00000481098 SIRT1Q96EB6 747 aa11.66□□□□□ -0.54
GTF3C3-211ENST00000481098 OSBPL3Q9H4L5 887 aa11.66□□□□□ -0.54
GTF3C3-211ENST00000481098 USP17L5A8MUK1 530 aa11.65□□□□□ -0.54
GTF3C3-211ENST00000481098 UPP2O95045 317 aa11.65□□□□□ -0.54
GTF3C3-211ENST00000481098 SCARF1Q14162 830 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms