RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 CCDC146Q8IYE0 955 aa19.57■□□□□ 0.72
SNRNP200-205ENST00000480835 IP6K1Q92551 441 aa19.56■□□□□ 0.72
SNRNP200-205ENST00000480835 APAF1O14727 1248 aa19.55■□□□□ 0.72
SNRNP200-205ENST00000480835 TOM1O60784 492 aa19.55■□□□□ 0.72
SNRNP200-205ENST00000480835 HSP90AB2PQ58FF8 381 aa19.55■□□□□ 0.72
SNRNP200-205ENST00000480835 ARHGEF25Q86VW2 580 aa19.55■□□□□ 0.72
SNRNP200-205ENST00000480835 NEFMP07197 916 aa19.54■□□□□ 0.72
SNRNP200-205ENST00000480835 ABCC6O95255 1503 aa19.54■□□□□ 0.72
SNRNP200-205ENST00000480835 PLEKHF1Q96S99 279 aa19.53■□□□□ 0.72
SNRNP200-205ENST00000480835 RSPH6AQ9H0K4 717 aa19.53■□□□□ 0.72
SNRNP200-205ENST00000480835 MAPK8IP3Q9UPT6 1336 aa19.52■□□□□ 0.72
SNRNP200-205ENST00000480835 TCP11L2Q8N4U5 519 aa19.52■□□□□ 0.72
SNRNP200-205ENST00000480835 ABCA3Q99758 1704 aa19.5■□□□□ 0.71
SNRNP200-205ENST00000480835 ZNF521Q96K83 1311 aa19.5■□□□□ 0.71
SNRNP200-205ENST00000480835 CPDO75976 1380 aa19.49■□□□□ 0.71
SNRNP200-205ENST00000480835 PRKAR2BP31323 418 aa19.49■□□□□ 0.71
SNRNP200-205ENST00000480835 CCDC27Q2M243 656 aa19.49■□□□□ 0.71
SNRNP200-205ENST00000480835 SALL2Q9Y467 1007 aaPredicted RBP19.49■□□□□ 0.71
SNRNP200-205ENST00000480835 IGSF1Q8N6C5 1336 aa19.49■□□□□ 0.71
SNRNP200-205ENST00000480835 LRRC59Q96AG4 307 aaKnown RBP19.48■□□□□ 0.71
SNRNP200-205ENST00000480835 PHLPP1O60346 1717 aa19.48■□□□□ 0.71
SNRNP200-205ENST00000480835 COL18A1P39060 1754 aa19.47■□□□□ 0.71
SNRNP200-205ENST00000480835 SENP3-EIF4A1A0A087X0R7 540 aa19.47■□□□□ 0.71
SNRNP200-205ENST00000480835 HMOX1P09601 288 aa19.47■□□□□ 0.71
SNRNP200-205ENST00000480835 KDRP35968 1356 aa19.46■□□□□ 0.71
SNRNP200-205ENST00000480835 TMPOP42166 694 aaKnown RBP19.46■□□□□ 0.71
SNRNP200-205ENST00000480835 SULT6B1Q6IMI4 303 aa19.46■□□□□ 0.71
SNRNP200-205ENST00000480835 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
SNRNP200-205ENST00000480835 RGPD5Q99666 1765 aa19.46■□□□□ 0.71
SNRNP200-205ENST00000480835 COL22A1Q8NFW1 1626 aaPredicted RBP19.46■□□□□ 0.71
SNRNP200-205ENST00000480835 ZBTB7CA1YPR0 619 aa19.45■□□□□ 0.7
SNRNP200-205ENST00000480835 FAM208AQ9UK61 1670 aaKnown RBP19.44■□□□□ 0.7
SNRNP200-205ENST00000480835 PLEKHG5O94827 1062 aa19.44■□□□□ 0.7
SNRNP200-205ENST00000480835 ZC3H6P61129 1189 aaKnown RBP19.44■□□□□ 0.7
SNRNP200-205ENST00000480835 GOLGA2Q08379 1002 aa19.44■□□□□ 0.7
SNRNP200-205ENST00000480835 EYA1Q99502 592 aa19.44■□□□□ 0.7
SNRNP200-205ENST00000480835 COL16A1Q07092 1604 aaPredicted RBP19.43■□□□□ 0.7
SNRNP200-205ENST00000480835 CAMTA1Q9Y6Y1 1673 aa19.43■□□□□ 0.7
SNRNP200-205ENST00000480835 UBAP1LF5GYI3 381 aa19.43■□□□□ 0.7
SNRNP200-205ENST00000480835 WDR63Q8IWG1 891 aa19.43■□□□□ 0.7
SNRNP200-205ENST00000480835 WWC1Q8IX03 1113 aa19.43■□□□□ 0.7
SNRNP200-205ENST00000480835 CERKQ8TCT0 537 aa19.43■□□□□ 0.7
SNRNP200-205ENST00000480835 CABLES1Q8TDN4 633 aa19.43■□□□□ 0.7
SNRNP200-205ENST00000480835 HAP1P54257 671 aaPredicted RBP19.42■□□□□ 0.7
SNRNP200-205ENST00000480835 NFE2L2Q16236 605 aa19.42■□□□□ 0.7
SNRNP200-205ENST00000480835 DLG5Q8TDM6 1919 aa19.41■□□□□ 0.7
SNRNP200-205ENST00000480835 NEUROD2Q15784 382 aa19.41■□□□□ 0.7
SNRNP200-205ENST00000480835 AEBP1Q8IUX7 1158 aa19.41■□□□□ 0.7
SNRNP200-205ENST00000480835 LTV1Q96GA3 475 aaPredicted RBP19.41■□□□□ 0.7
SNRNP200-205ENST00000480835 RRP7AQ9Y3A4 280 aaKnown RBP19.41■□□□□ 0.7
SNRNP200-205ENST00000480835 RGPD2P0DJD1 1756 aa19.41■□□□□ 0.7
SNRNP200-205ENST00000480835 KIAA0232Q92628 1395 aa19.41■□□□□ 0.7
SNRNP200-205ENST00000480835 NCAPD2Q15021 1401 aa19.41■□□□□ 0.7
SNRNP200-205ENST00000480835 RIPK4P57078 832 aa19.4■□□□□ 0.7
SNRNP200-205ENST00000480835 LMOD3Q0VAK6 560 aa19.4■□□□□ 0.7
SNRNP200-205ENST00000480835 ANKRD24Q8TF21 1146 aa19.4■□□□□ 0.7
SNRNP200-205ENST00000480835 E9PSI1 815 aa19.39■□□□□ 0.69
SNRNP200-205ENST00000480835 SLFN5Q08AF3 891 aa19.39■□□□□ 0.69
SNRNP200-205ENST00000480835 PHACTR3Q96KR7 559 aa19.39■□□□□ 0.69
SNRNP200-205ENST00000480835 ERBB3P21860 1342 aa19.38■□□□□ 0.69
SNRNP200-205ENST00000480835 PIP4K2BP78356 416 aa19.38■□□□□ 0.69
SNRNP200-205ENST00000480835 LMO7Q8WWI1 1683 aa19.38■□□□□ 0.69
SNRNP200-205ENST00000480835 CDCA7LQ96GN5 454 aa19.38■□□□□ 0.69
SNRNP200-205ENST00000480835 AXIN2Q9Y2T1 843 aa19.38■□□□□ 0.69
SNRNP200-205ENST00000480835 IL16Q14005 1332 aa19.37■□□□□ 0.69
SNRNP200-205ENST00000480835 PRDM11Q9NQV5 511 aa19.37■□□□□ 0.69
SNRNP200-205ENST00000480835 TRIM35Q9UPQ4 493 aa19.37■□□□□ 0.69
SNRNP200-205ENST00000480835 NBPF6Q5VWK0 638 aa19.36■□□□□ 0.69
SNRNP200-205ENST00000480835 TRMT2AQ8IZ69 625 aaKnown RBP19.36■□□□□ 0.69
SNRNP200-205ENST00000480835 NBPF4Q96M43 638 aa19.36■□□□□ 0.69
SNRNP200-205ENST00000480835 CALD1Q05682 793 aaKnown RBP19.35■□□□□ 0.69
SNRNP200-205ENST00000480835 DUSP27Q5VZP5 1158 aa19.35■□□□□ 0.69
SNRNP200-205ENST00000480835 COL14A1Q05707 1796 aaKnown RBP19.34■□□□□ 0.69
SNRNP200-205ENST00000480835 CHRNA2Q15822 529 aa19.34■□□□□ 0.69
SNRNP200-205ENST00000480835 GAS2L2Q8NHY3 880 aa19.34■□□□□ 0.69
SNRNP200-205ENST00000480835 PLEKHG2Q9H7P9 1386 aa19.33■□□□□ 0.69
SNRNP200-205ENST00000480835 MYH16Q9H6N6 1097 aa19.32■□□□□ 0.68
SNRNP200-205ENST00000480835 CSB-PGBD3P0DP91 1061 aa19.3■□□□□ 0.68
SNRNP200-205ENST00000480835 USHBP1Q8N6Y0 703 aa19.3■□□□□ 0.68
SNRNP200-205ENST00000480835 COL5A2P05997 1499 aaPredicted RBP19.29■□□□□ 0.68
SNRNP200-205ENST00000480835 HTATSF1O43719 755 aaKnown RBP19.29■□□□□ 0.68
SNRNP200-205ENST00000480835 MTHFSDQ2M296 383 aaKnown RBP19.29■□□□□ 0.68
SNRNP200-205ENST00000480835 SPINK5Q9NQ38 1064 aaPredicted RBP19.29■□□□□ 0.68
SNRNP200-205ENST00000480835 NLRP2Q9NX02 1062 aa19.29■□□□□ 0.68
SNRNP200-205ENST00000480835 WDR17Q8IZU2 1322 aa19.28■□□□□ 0.68
SNRNP200-205ENST00000480835 AMOTQ4VCS5 1084 aa19.28■□□□□ 0.68
SNRNP200-205ENST00000480835 FAM83GA6ND36 823 aa19.27■□□□□ 0.68
SNRNP200-205ENST00000480835 PLEKHO1Q53GL0 409 aaPredicted RBP19.27■□□□□ 0.68
SNRNP200-205ENST00000480835 RCAN3Q9UKA8 241 aa19.27■□□□□ 0.68
SNRNP200-205ENST00000480835 SUPT16HQ9Y5B9 1047 aaKnown RBP19.27■□□□□ 0.68
SNRNP200-205ENST00000480835 JCADQ9P266 1359 aa19.27■□□□□ 0.68
SNRNP200-205ENST00000480835 NEFLP07196 543 aa19.26■□□□□ 0.67
SNRNP200-205ENST00000480835 RTF1Q92541 710 aaKnown RBP19.26■□□□□ 0.67
SNRNP200-205ENST00000480835 MAP3K5Q99683 1374 aa19.25■□□□□ 0.67
SNRNP200-205ENST00000480835 GNAI1P63096 354 aa19.25■□□□□ 0.67
SNRNP200-205ENST00000480835 RAPGEF4Q8WZA2 1011 aa19.25■□□□□ 0.67
SNRNP200-205ENST00000480835 GNAT3A8MTJ3 354 aa19.24■□□□□ 0.67
SNRNP200-205ENST00000480835 TATP17735 454 aaPredicted RBP19.24■□□□□ 0.67
SNRNP200-205ENST00000480835 IFT57Q9NWB7 429 aa19.24■□□□□ 0.67
SNRNP200-205ENST00000480835 GTF3C3Q9Y5Q9 886 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms