RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 CPDO75976 1380 aa12.11□□□□□ -0.47
NUDCD3-208ENST00000480209 FLT4P35916 1363 aa12.11□□□□□ -0.47
NUDCD3-208ENST00000480209 JCADQ9P266 1359 aa12.11□□□□□ -0.47
NUDCD3-208ENST00000480209 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
NUDCD3-208ENST00000480209 ARHGEF25Q86VW2 580 aa12.11□□□□□ -0.47
NUDCD3-208ENST00000480209 INSRP06213 1382 aa12.1□□□□□ -0.47
NUDCD3-208ENST00000480209 ZC3H6P61129 1189 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-208ENST00000480209 KCNH5Q8NCM2 988 aa12.1□□□□□ -0.47
NUDCD3-208ENST00000480209 MRS2Q9HD23 443 aa12.1□□□□□ -0.47
NUDCD3-208ENST00000480209 NWD2Q9ULI1 1742 aa12.1□□□□□ -0.47
NUDCD3-208ENST00000480209 WNK3Q9BYP7 1800 aa12.09□□□□□ -0.47
NUDCD3-208ENST00000480209 KIF24Q5T7B8 1368 aa12.09□□□□□ -0.47
NUDCD3-208ENST00000480209 HOXC9P31274 260 aa12.09□□□□□ -0.47
NUDCD3-208ENST00000480209 ZBTB7CA1YPR0 619 aa12.08□□□□□ -0.48
NUDCD3-208ENST00000480209 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
NUDCD3-208ENST00000480209 CHRNA2Q15822 529 aa12.08□□□□□ -0.48
NUDCD3-208ENST00000480209 HSP90AB2PQ58FF8 381 aa12.08□□□□□ -0.48
NUDCD3-208ENST00000480209 BLMP54132 1417 aaPredicted RBP12.08□□□□□ -0.48
NUDCD3-208ENST00000480209 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-208ENST00000480209 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.48
NUDCD3-208ENST00000480209 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
NUDCD3-208ENST00000480209 EIF4A2Q14240 407 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-208ENST00000480209 PNISRQ8TF01 805 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-208ENST00000480209 IL13P35225 146 aa12.05□□□□□ -0.48
NUDCD3-208ENST00000480209 AMPHP49418 695 aa12.05□□□□□ -0.48
NUDCD3-208ENST00000480209 IP6K1Q92551 441 aa12.05□□□□□ -0.48
NUDCD3-208ENST00000480209 DLG5Q8TDM6 1919 aa12.05□□□□□ -0.48
NUDCD3-208ENST00000480209 NCAPD2Q15021 1401 aa12.04□□□□□ -0.48
NUDCD3-208ENST00000480209 NUTM2BA6NNL0 878 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-208ENST00000480209 NUTM2EB1AL46 878 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-208ENST00000480209 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-208ENST00000480209 NUTM2AQ8IVF1 878 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-208ENST00000480209 FBXO41Q8TF61 875 aa12.04□□□□□ -0.48
NUDCD3-208ENST00000480209 PRDM11Q9NQV5 511 aa12.04□□□□□ -0.48
NUDCD3-208ENST00000480209 SLIT2O94813 1529 aa12.04□□□□□ -0.48
NUDCD3-208ENST00000480209 SHANK3Q9BYB0 1731 aa12.03□□□□□ -0.48
NUDCD3-208ENST00000480209 VIRMAQ69YN4 1812 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-208ENST00000480209 FAM83GA6ND36 823 aa12.03□□□□□ -0.48
NUDCD3-208ENST00000480209 CFAP53Q96M91 514 aa12.03□□□□□ -0.48
NUDCD3-208ENST00000480209 ERBB3P21860 1342 aa12.03□□□□□ -0.48
NUDCD3-208ENST00000480209 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
NUDCD3-208ENST00000480209 DIAPH1O60610 1272 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-208ENST00000480209 ADAMTS2O95450 1211 aa12.02□□□□□ -0.49
NUDCD3-208ENST00000480209 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.49
NUDCD3-208ENST00000480209 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
NUDCD3-208ENST00000480209 PKD1L3Q7Z443 1732 aa12.02□□□□□ -0.49
NUDCD3-208ENST00000480209 PARP4Q9UKK3 1724 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-208ENST00000480209 ANKRD24Q8TF21 1146 aa12.01□□□□□ -0.49
NUDCD3-208ENST00000480209 LTV1Q96GA3 475 aaPredicted RBP12.01□□□□□ -0.49
NUDCD3-208ENST00000480209 NPM3O75607 178 aaKnown RBP12□□□□□ -0.49
NUDCD3-208ENST00000480209 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
NUDCD3-208ENST00000480209 ADAMTS8Q9UP79 889 aa12□□□□□ -0.49
NUDCD3-208ENST00000480209 KDRP35968 1356 aa12□□□□□ -0.49
NUDCD3-208ENST00000480209 U2SURPO15042 1029 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-208ENST00000480209 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
NUDCD3-208ENST00000480209 USHBP1Q8N6Y0 703 aa11.99□□□□□ -0.49
NUDCD3-208ENST00000480209 EYA1Q99502 592 aa11.99□□□□□ -0.49
NUDCD3-208ENST00000480209 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
NUDCD3-208ENST00000480209 MEGF6O75095 1541 aa11.99□□□□□ -0.49
NUDCD3-208ENST00000480209 WDR17Q8IZU2 1322 aa11.98□□□□□ -0.49
NUDCD3-208ENST00000480209 SENP3-EIF4A1A0A087X0R7 540 aa11.98□□□□□ -0.49
NUDCD3-208ENST00000480209 HMOX1P09601 288 aa11.98□□□□□ -0.49
NUDCD3-208ENST00000480209 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
NUDCD3-208ENST00000480209 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
NUDCD3-208ENST00000480209 NBPF6Q5VWK0 638 aa11.98□□□□□ -0.49
NUDCD3-208ENST00000480209 NBPF4Q96M43 638 aa11.98□□□□□ -0.49
NUDCD3-208ENST00000480209 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
NUDCD3-208ENST00000480209 BTG4Q9NY30 223 aa11.98□□□□□ -0.49
NUDCD3-208ENST00000480209 LRRC37A3O60309 1634 aa11.97□□□□□ -0.49
NUDCD3-208ENST00000480209 GLI3P10071 1580 aa11.97□□□□□ -0.49
NUDCD3-208ENST00000480209 CRB1P82279 1406 aa11.97□□□□□ -0.49
NUDCD3-208ENST00000480209 CCDC146Q8IYE0 955 aa11.97□□□□□ -0.49
NUDCD3-208ENST00000480209 SULT6B1Q6IMI4 303 aa11.96□□□□□ -0.49
NUDCD3-208ENST00000480209 LARP1Q6PKG0 1096 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-208ENST00000480209 C8orf37Q96NL8 207 aa11.96□□□□□ -0.49
NUDCD3-208ENST00000480209 PLEKHF1Q96S99 279 aa11.96□□□□□ -0.49
NUDCD3-208ENST00000480209 STRN4Q9NRL3 753 aa11.96□□□□□ -0.49
NUDCD3-208ENST00000480209 NUDCQ9Y266 331 aa11.95□□□□□ -0.5
NUDCD3-208ENST00000480209 DISP2A7MBM2 1401 aa11.94□□□□□ -0.5
NUDCD3-208ENST00000480209 THSD7AQ9UPZ6 1657 aa11.94□□□□□ -0.5
NUDCD3-208ENST00000480209 PRKAR2BP31323 418 aa11.94□□□□□ -0.5
NUDCD3-208ENST00000480209 ADAMTS7Q9UKP4 1686 aa11.94□□□□□ -0.5
NUDCD3-208ENST00000480209 CSB-PGBD3P0DP91 1061 aa11.93□□□□□ -0.5
NUDCD3-208ENST00000480209 FNBP4Q8N3X1 1017 aaPredicted RBP11.93□□□□□ -0.5
NUDCD3-208ENST00000480209 PHACTR3Q96KR7 559 aa11.93□□□□□ -0.5
NUDCD3-208ENST00000480209 YTHDC1Q96MU7 727 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-208ENST00000480209 NLRP2Q9NX02 1062 aa11.93□□□□□ -0.5
NUDCD3-208ENST00000480209 TOGARAM1Q9Y4F4 1720 aa11.93□□□□□ -0.5
NUDCD3-208ENST00000480209 OVOS2A0A0G2JMS6 1433 aa11.93□□□□□ -0.5
NUDCD3-208ENST00000480209 AFF2P51816 1311 aa11.92□□□□□ -0.5
NUDCD3-208ENST00000480209 MEX3CQ5U5Q3 659 aaKnown RBP11.92□□□□□ -0.5
NUDCD3-208ENST00000480209 TOM1L2Q6ZVM7 507 aa11.92□□□□□ -0.5
NUDCD3-208ENST00000480209 NGLY1Q96IV0 654 aa11.92□□□□□ -0.5
NUDCD3-208ENST00000480209 ATRNO75882 1429 aa11.92□□□□□ -0.5
NUDCD3-208ENST00000480209 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
NUDCD3-208ENST00000480209 FCHSD2O94868 740 aa11.91□□□□□ -0.5
NUDCD3-208ENST00000480209 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
NUDCD3-208ENST00000480209 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
NUDCD3-208ENST00000480209 SIPA1L3O60292 1781 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-208ENST00000480209 BRWD3Q6RI45 1802 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms