RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 SOS2Q07890 1332 aaPredicted RBP6.1□□□□□ -1.43
COPS7B-220ENST00000479430 PIP4P2Q8N4L2 257 aa6.1□□□□□ -1.43
COPS7B-220ENST00000479430 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.1□□□□□ -1.43
COPS7B-220ENST00000479430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.1□□□□□ -1.43
COPS7B-220ENST00000479430 TNS1Q9HBL0 1735 aaKnown RBP6.1□□□□□ -1.43
COPS7B-220ENST00000479430 LAMC1P11047 1609 aa6.1□□□□□ -1.43
COPS7B-220ENST00000479430 MYOM2P54296 1465 aa6.09□□□□□ -1.43
COPS7B-220ENST00000479430 BLMP54132 1417 aaPredicted RBP6.09□□□□□ -1.43
COPS7B-220ENST00000479430 ANKRD50Q9ULJ7 1429 aa6.09□□□□□ -1.43
COPS7B-220ENST00000479430 MINK1Q8N4C8 1332 aaPredicted RBP6.09□□□□□ -1.43
COPS7B-220ENST00000479430 GRXCR2A6NFK2 248 aa6.09□□□□□ -1.43
COPS7B-220ENST00000479430 IRF6O14896 467 aa6.09□□□□□ -1.43
COPS7B-220ENST00000479430 CD44P16070 742 aaKnown RBP6.09□□□□□ -1.43
COPS7B-220ENST00000479430 YY1P25490 414 aa6.09□□□□□ -1.43
COPS7B-220ENST00000479430 HDGFP51858 240 aaKnown RBP6.09□□□□□ -1.43
COPS7B-220ENST00000479430 EZH2Q15910 746 aaKnown RBP6.09□□□□□ -1.43
COPS7B-220ENST00000479430 WAPLQ7Z5K2 1190 aa6.09□□□□□ -1.43
COPS7B-220ENST00000479430 STK26Q9P289 416 aa6.09□□□□□ -1.43
COPS7B-220ENST00000479430 IQGAP3Q86VI3 1631 aa6.09□□□□□ -1.43
COPS7B-220ENST00000479430 NEXMIFQ5QGS0 1516 aa6.09□□□□□ -1.44
COPS7B-220ENST00000479430 PXDNQ92626 1479 aa6.09□□□□□ -1.44
COPS7B-220ENST00000479430 USP32Q8NFA0 1604 aa6.08□□□□□ -1.44
COPS7B-220ENST00000479430 FECHP22830 423 aa6.08□□□□□ -1.44
COPS7B-220ENST00000479430 SF3B2Q13435 895 aaKnown RBP6.08□□□□□ -1.44
COPS7B-220ENST00000479430 FAM98CQ17RN3 349 aaKnown RBP6.08□□□□□ -1.44
COPS7B-220ENST00000479430 CCDC102AQ96A19 550 aa6.08□□□□□ -1.44
COPS7B-220ENST00000479430 MS4A3Q96HJ5 214 aa6.08□□□□□ -1.44
COPS7B-220ENST00000479430 RGPD1P0DJD0 1748 aa6.08□□□□□ -1.44
COPS7B-220ENST00000479430 DCCP43146 1447 aa6.08□□□□□ -1.44
COPS7B-220ENST00000479430 PTCH1Q13635 1447 aa6.08□□□□□ -1.44
COPS7B-220ENST00000479430 APBB1O00213 710 aa6.07□□□□□ -1.44
COPS7B-220ENST00000479430 KRT27Q7Z3Y8 459 aa6.07□□□□□ -1.44
COPS7B-220ENST00000479430 UNC5CLQ8IV45 518 aa6.07□□□□□ -1.44
COPS7B-220ENST00000479430 NRAPQ86VF7 1730 aa6.07□□□□□ -1.44
COPS7B-220ENST00000479430 IFT172Q9UG01 1749 aa6.07□□□□□ -1.44
COPS7B-220ENST00000479430 RPRD2Q5VT52 1461 aaKnown RBP6.07□□□□□ -1.44
COPS7B-220ENST00000479430 NUP155O75694 1391 aa6.06□□□□□ -1.44
COPS7B-220ENST00000479430 PIK3R4Q99570 1358 aa6.06□□□□□ -1.44
COPS7B-220ENST00000479430 PLEKHH1Q9ULM0 1364 aa6.06□□□□□ -1.44
COPS7B-220ENST00000479430 PPLO60437 1756 aa6.06□□□□□ -1.44
COPS7B-220ENST00000479430 SLIT2O94813 1529 aa6.06□□□□□ -1.44
COPS7B-220ENST00000479430 FOXK1P85037 733 aa6.06□□□□□ -1.44
COPS7B-220ENST00000479430 MAP2K5Q13163 448 aa6.06□□□□□ -1.44
COPS7B-220ENST00000479430 IFFO2Q5TF58 517 aa6.06□□□□□ -1.44
COPS7B-220ENST00000479430 PARP9Q8IXQ6 854 aa6.06□□□□□ -1.44
COPS7B-220ENST00000479430 ADGRL2O95490 1459 aa6.06□□□□□ -1.44
COPS7B-220ENST00000479430 NUP188Q5SRE5 1749 aa6.05□□□□□ -1.44
COPS7B-220ENST00000479430 FMN2Q9NZ56 1722 aa6.05□□□□□ -1.44
COPS7B-220ENST00000479430 TTLL13PA6NNM8 815 aa6.05□□□□□ -1.44
COPS7B-220ENST00000479430 OSBPP22059 807 aa6.05□□□□□ -1.44
COPS7B-220ENST00000479430 MAP3K9P80192 1104 aa6.05□□□□□ -1.44
COPS7B-220ENST00000479430 SAFB2Q14151 953 aaKnown RBP eCLIP6.05□□□□□ -1.44
COPS7B-220ENST00000479430 TMEM132EQ6IEE7 984 aa6.05□□□□□ -1.44
COPS7B-220ENST00000479430 CCDC125Q86Z20 511 aa6.05□□□□□ -1.44
COPS7B-220ENST00000479430 PLPP6Q8IY26 295 aa6.05□□□□□ -1.44
COPS7B-220ENST00000479430 TMC2Q8TDI7 906 aa6.05□□□□□ -1.44
COPS7B-220ENST00000479430 DDRGK1Q96HY6 314 aa6.05□□□□□ -1.44
COPS7B-220ENST00000479430 KAT6BQ8WYB5 2073 aa6.05□□□□□ -1.44
COPS7B-220ENST00000479430 FAM83GA6ND36 823 aa6.04□□□□□ -1.44
COPS7B-220ENST00000479430 TRIM37O94972 964 aa6.04□□□□□ -1.44
COPS7B-220ENST00000479430 BAG6P46379 1132 aa6.04□□□□□ -1.44
COPS7B-220ENST00000479430 AMHR2Q16671 573 aa6.04□□□□□ -1.44
COPS7B-220ENST00000479430 CHRDL2Q6WN34 429 aa6.04□□□□□ -1.44
COPS7B-220ENST00000479430 KRT28Q7Z3Y7 464 aa6.04□□□□□ -1.44
COPS7B-220ENST00000479430 MICALL2Q8IY33 904 aa6.04□□□□□ -1.44
COPS7B-220ENST00000479430 NWD2Q9ULI1 1742 aa6.04□□□□□ -1.44
COPS7B-220ENST00000479430 CHD4Q14839 1912 aa6.03□□□□□ -1.44
COPS7B-220ENST00000479430 UTRNP46939 3433 aa6.03□□□□□ -1.44
COPS7B-220ENST00000479430 NAIPQ13075 1403 aa6.03□□□□□ -1.44
COPS7B-220ENST00000479430 GNPATO15228 680 aa6.03□□□□□ -1.44
COPS7B-220ENST00000479430 PMFBP1Q8TBY8 1022 aa6.03□□□□□ -1.44
COPS7B-220ENST00000479430 PDGFDQ9GZP0 370 aaPredicted RBP6.03□□□□□ -1.44
COPS7B-220ENST00000479430 RREB1Q92766 1687 aa6.03□□□□□ -1.44
COPS7B-220ENST00000479430 SPATA31A3Q5VYP0 1347 aa6.02□□□□□ -1.45
COPS7B-220ENST00000479430 SENP3-EIF4A1A0A087X0R7 540 aa6.02□□□□□ -1.45
COPS7B-220ENST00000479430 C2orf72A6NCS6 295 aa6.02□□□□□ -1.45
COPS7B-220ENST00000479430 FLIIQ13045 1269 aa6.02□□□□□ -1.45
COPS7B-220ENST00000479430 VPS72Q15906 364 aa6.02□□□□□ -1.45
COPS7B-220ENST00000479430 BMP2KQ9NSY1 1161 aaPredicted RBP6.02□□□□□ -1.45
COPS7B-220ENST00000479430 BTG4Q9NY30 223 aa6.02□□□□□ -1.45
COPS7B-220ENST00000479430 USP35Q9P2H5 1018 aa6.02□□□□□ -1.45
COPS7B-220ENST00000479430 NPHP3Q7Z494 1330 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 ADGRF5Q8IZF2 1346 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 MYOM1P52179 1685 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 ONECUT3O60422 494 aaPredicted RBP6.01□□□□□ -1.45
COPS7B-220ENST00000479430 TIE1P35590 1138 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 PRIM1P49642 420 aaKnown RBP6.01□□□□□ -1.45
COPS7B-220ENST00000479430 CHRNA2Q15822 529 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 RGL3Q3MIN7 710 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 NUTM2GQ5VZR2 741 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 DDX12PQ92771 950 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 CLUAP1Q96AJ1 413 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 TRIM35Q9UPQ4 493 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 SBF2Q86WG5 1849 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 CDC42BPGQ6DT37 1551 aa6.01□□□□□ -1.45
COPS7B-220ENST00000479430 TRPM3Q9HCF6 1732 aaPredicted RBP6□□□□□ -1.45
COPS7B-220ENST00000479430 CRYBG1Q9Y4K1 1723 aa6□□□□□ -1.45
COPS7B-220ENST00000479430 KIF3CO14782 793 aa6□□□□□ -1.45
COPS7B-220ENST00000479430 FCHSD2O94868 740 aa6□□□□□ -1.45
COPS7B-220ENST00000479430 APBA3O96018 575 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms