RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 TTC21BQ7Z4L5 1316 aa12.7□□□□□ -0.38
CMTM1-208ENST00000479381 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
CMTM1-208ENST00000479381 GCP02774 474 aa12.7□□□□□ -0.38
CMTM1-208ENST00000479381 CSB-PGBD3P0DP91 1061 aa12.7□□□□□ -0.38
CMTM1-208ENST00000479381 TMF1P82094 1093 aa12.7□□□□□ -0.38
CMTM1-208ENST00000479381 TERF2IPQ9NYB0 399 aa12.7□□□□□ -0.38
CMTM1-208ENST00000479381 TTC21AQ8NDW8 1320 aa12.69□□□□□ -0.38
CMTM1-208ENST00000479381 KRT27Q7Z3Y8 459 aa12.69□□□□□ -0.38
CMTM1-208ENST00000479381 KCNH5Q8NCM2 988 aa12.68□□□□□ -0.38
CMTM1-208ENST00000479381 SLC12A5Q9H2X9 1139 aa12.68□□□□□ -0.38
CMTM1-208ENST00000479381 PIK3C2AO00443 1686 aa12.67□□□□□ -0.38
CMTM1-208ENST00000479381 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
CMTM1-208ENST00000479381 USP19O94966 1318 aa12.67□□□□□ -0.38
CMTM1-208ENST00000479381 CDCA8Q53HL2 280 aa12.67□□□□□ -0.38
CMTM1-208ENST00000479381 TIMELESSQ9UNS1 1208 aa12.67□□□□□ -0.38
CMTM1-208ENST00000479381 SPATA31A5Q5VU36 1347 aa12.66□□□□□ -0.38
CMTM1-208ENST00000479381 SPATA31A7Q8IWB4 1347 aa12.66□□□□□ -0.38
CMTM1-208ENST00000479381 MON2Q7Z3U7 1717 aa12.66□□□□□ -0.38
CMTM1-208ENST00000479381 TOM1L2Q6ZVM7 507 aa12.66□□□□□ -0.38
CMTM1-208ENST00000479381 SSH2Q76I76 1423 aa12.65□□□□□ -0.38
CMTM1-208ENST00000479381 PDE3BQ13370 1112 aa12.65□□□□□ -0.38
CMTM1-208ENST00000479381 CPDO75976 1380 aa12.65□□□□□ -0.38
CMTM1-208ENST00000479381 LARP1Q6PKG0 1096 aaKnown RBP12.64□□□□□ -0.39
CMTM1-208ENST00000479381 NME9Q86XW9 330 aa12.64□□□□□ -0.39
CMTM1-208ENST00000479381 SPATA31A1Q5TZJ5 1347 aa12.63□□□□□ -0.39
CMTM1-208ENST00000479381 SLIT3O75094 1523 aa12.63□□□□□ -0.39
CMTM1-208ENST00000479381 POTEHQ6S545 545 aa12.63□□□□□ -0.39
CMTM1-208ENST00000479381 CCDC125Q86Z20 511 aa12.63□□□□□ -0.39
CMTM1-208ENST00000479381 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
CMTM1-208ENST00000479381 A0A1W2PP64 1363 aa12.63□□□□□ -0.39
CMTM1-208ENST00000479381 NINLQ9Y2I6 1382 aa12.63□□□□□ -0.39
CMTM1-208ENST00000479381 CPSF1Q10570 1443 aaKnown RBP12.62□□□□□ -0.39
CMTM1-208ENST00000479381 EDC4Q6P2E9 1401 aaKnown RBP12.62□□□□□ -0.39
CMTM1-208ENST00000479381 CAMTA1Q9Y6Y1 1673 aa12.62□□□□□ -0.39
CMTM1-208ENST00000479381 FAM182BQ5T319 152 aa12.62□□□□□ -0.39
CMTM1-208ENST00000479381 COG3Q96JB2 828 aa12.62□□□□□ -0.39
CMTM1-208ENST00000479381 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
CMTM1-208ENST00000479381 COL5A2P05997 1499 aaPredicted RBP12.61□□□□□ -0.39
CMTM1-208ENST00000479381 BAG6P46379 1132 aa12.61□□□□□ -0.39
CMTM1-208ENST00000479381 TESK2Q96S53 571 aa12.61□□□□□ -0.39
CMTM1-208ENST00000479381 BLMP54132 1417 aaPredicted RBP12.61□□□□□ -0.39
CMTM1-208ENST00000479381 AATKQ6ZMQ8 1374 aa12.6□□□□□ -0.39
CMTM1-208ENST00000479381 PUS7Q96PZ0 661 aaKnown RBP12.6□□□□□ -0.39
CMTM1-208ENST00000479381 CRB1P82279 1406 aa12.6□□□□□ -0.39
CMTM1-208ENST00000479381 LMO7Q8WWI1 1683 aa12.6□□□□□ -0.39
CMTM1-208ENST00000479381 EIF4G2P78344 907 aaKnown RBP eCLIP12.59□□□□□ -0.39
CMTM1-208ENST00000479381 FKBP8Q14318 412 aa12.59□□□□□ -0.39
CMTM1-208ENST00000479381 DEFB132Q7Z7B7 95 aa12.59□□□□□ -0.39
CMTM1-208ENST00000479381 LTV1Q96GA3 475 aaPredicted RBP12.59□□□□□ -0.39
CMTM1-208ENST00000479381 THRAP3Q9Y2W1 955 aaKnown RBP12.59□□□□□ -0.39
CMTM1-208ENST00000479381 CD163L1Q9NR16 1453 aa12.59□□□□□ -0.39
CMTM1-208ENST00000479381 LTN1O94822 1766 aa12.58□□□□□ -0.39
CMTM1-208ENST00000479381 RGPD5Q99666 1765 aa12.58□□□□□ -0.39
CMTM1-208ENST00000479381 ANKRD36BQ8N2N9 1353 aa12.58□□□□□ -0.4
CMTM1-208ENST00000479381 ONECUT3O60422 494 aaPredicted RBP12.58□□□□□ -0.4
CMTM1-208ENST00000479381 AMPHP49418 695 aa12.58□□□□□ -0.4
CMTM1-208ENST00000479381 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.4
CMTM1-208ENST00000479381 DDB1Q16531 1140 aa12.57□□□□□ -0.4
CMTM1-208ENST00000479381 FAM196AQ6ZSG2 479 aa12.57□□□□□ -0.4
CMTM1-208ENST00000479381 BARGINQ6ZT62 677 aa12.57□□□□□ -0.4
CMTM1-208ENST00000479381 ARHGEF25Q86VW2 580 aa12.57□□□□□ -0.4
CMTM1-208ENST00000479381 THSD7AQ9UPZ6 1657 aa12.57□□□□□ -0.4
CMTM1-208ENST00000479381 WDR17Q8IZU2 1322 aa12.57□□□□□ -0.4
CMTM1-208ENST00000479381 RGPD1P0DJD0 1748 aa12.57□□□□□ -0.4
CMTM1-208ENST00000479381 TRIM37O94972 964 aa12.56□□□□□ -0.4
CMTM1-208ENST00000479381 GGNBP2Q9H3C7 697 aa12.56□□□□□ -0.4
CMTM1-208ENST00000479381 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
CMTM1-208ENST00000479381 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
CMTM1-208ENST00000479381 AXIN2Q9Y2T1 843 aa12.55□□□□□ -0.4
CMTM1-208ENST00000479381 NFAT5O94916 1531 aa12.55□□□□□ -0.4
CMTM1-208ENST00000479381 KIF20BQ96Q89 1820 aa12.54□□□□□ -0.4
CMTM1-208ENST00000479381 HSPA5P11021 654 aaKnown RBP12.54□□□□□ -0.4
CMTM1-208ENST00000479381 ANKRD24Q8TF21 1146 aa12.54□□□□□ -0.4
CMTM1-208ENST00000479381 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
CMTM1-208ENST00000479381 APBA3O96018 575 aa12.53□□□□□ -0.4
CMTM1-208ENST00000479381 EN1Q05925 392 aaPredicted RBP12.53□□□□□ -0.4
CMTM1-208ENST00000479381 CDCA7Q9BWT1 371 aaPredicted RBP12.53□□□□□ -0.4
CMTM1-208ENST00000479381 CCDC7Q96M83 1385 aa12.53□□□□□ -0.4
CMTM1-208ENST00000479381 COL18A1P39060 1754 aa12.53□□□□□ -0.4
CMTM1-208ENST00000479381 OVOS2A0A0J9YW53 1432 aa12.53□□□□□ -0.4
CMTM1-208ENST00000479381 OVOS2Q6IE36 1432 aa12.53□□□□□ -0.4
CMTM1-208ENST00000479381 USP54Q70EL1 1684 aa12.52□□□□□ -0.4
CMTM1-208ENST00000479381 PARP4Q9UKK3 1724 aaKnown RBP12.52□□□□□ -0.41
CMTM1-208ENST00000479381 EXOC5O00471 708 aa12.52□□□□□ -0.41
CMTM1-208ENST00000479381 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
CMTM1-208ENST00000479381 CARD10Q9BWT7 1032 aa12.52□□□□□ -0.41
CMTM1-208ENST00000479381 OVOS2A0A0G2JMS6 1433 aa12.52□□□□□ -0.41
CMTM1-208ENST00000479381 SMG6Q86US8 1419 aaKnown RBP12.52□□□□□ -0.41
CMTM1-208ENST00000479381 WNK3Q9BYP7 1800 aa12.51□□□□□ -0.41
CMTM1-208ENST00000479381 RRS1Q15050 365 aaKnown RBP12.51□□□□□ -0.41
CMTM1-208ENST00000479381 PIP4P2Q8N4L2 257 aa12.51□□□□□ -0.41
CMTM1-208ENST00000479381 ERBB3P21860 1342 aa12.51□□□□□ -0.41
CMTM1-208ENST00000479381 ABCC6O95255 1503 aa12.51□□□□□ -0.41
CMTM1-208ENST00000479381 LRRC37A3O60309 1634 aa12.51□□□□□ -0.41
CMTM1-208ENST00000479381 C11orf95C9JLR9 678 aaPredicted RBP12.5□□□□□ -0.41
CMTM1-208ENST00000479381 MYOM1P52179 1685 aa12.49□□□□□ -0.41
CMTM1-208ENST00000479381 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
CMTM1-208ENST00000479381 MAP3K19Q56UN5 1328 aa12.49□□□□□ -0.41
CMTM1-208ENST00000479381 IL2RBP14784 551 aa12.49□□□□□ -0.41
CMTM1-208ENST00000479381 FBLN1P23142 703 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms