RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 COL14A1Q05707 1796 aaKnown RBP18.35■□□□□ 0.53
SMARCAL1-211ENST00000479008 COL3A1P02461 1466 aaPredicted RBP18.34■□□□□ 0.53
SMARCAL1-211ENST00000479008 HOXC9P31274 260 aa18.34■□□□□ 0.53
SMARCAL1-211ENST00000479008 CHRNA2Q15822 529 aa18.34■□□□□ 0.53
SMARCAL1-211ENST00000479008 PRDM11Q9NQV5 511 aa18.34■□□□□ 0.53
SMARCAL1-211ENST00000479008 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
SMARCAL1-211ENST00000479008 ABCC6O95255 1503 aa18.33■□□□□ 0.53
SMARCAL1-211ENST00000479008 ADAMTS2O95450 1211 aa18.33■□□□□ 0.52
SMARCAL1-211ENST00000479008 IP6K1Q92551 441 aa18.33■□□□□ 0.52
SMARCAL1-211ENST00000479008 PLCH1Q4KWH8 1693 aa18.33■□□□□ 0.52
SMARCAL1-211ENST00000479008 LRP6O75581 1613 aa18.32■□□□□ 0.52
SMARCAL1-211ENST00000479008 HSP90AB2PQ58FF8 381 aa18.32■□□□□ 0.52
SMARCAL1-211ENST00000479008 INSRP06213 1382 aa18.31■□□□□ 0.52
SMARCAL1-211ENST00000479008 RGPD2P0DJD1 1756 aa18.3■□□□□ 0.52
SMARCAL1-211ENST00000479008 BLMP54132 1417 aaPredicted RBP18.3■□□□□ 0.52
SMARCAL1-211ENST00000479008 CAMTA1Q9Y6Y1 1673 aa18.29■□□□□ 0.52
SMARCAL1-211ENST00000479008 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
SMARCAL1-211ENST00000479008 DIAPH1O60610 1272 aaKnown RBP18.29■□□□□ 0.52
SMARCAL1-211ENST00000479008 AXIN2Q9Y2T1 843 aa18.29■□□□□ 0.52
SMARCAL1-211ENST00000479008 LTV1Q96GA3 475 aaPredicted RBP18.28■□□□□ 0.52
SMARCAL1-211ENST00000479008 NWD2Q9ULI1 1742 aa18.28■□□□□ 0.52
SMARCAL1-211ENST00000479008 EIF4A2Q14240 407 aaKnown RBP18.27■□□□□ 0.52
SMARCAL1-211ENST00000479008 FAM208AQ9UK61 1670 aaKnown RBP18.27■□□□□ 0.52
SMARCAL1-211ENST00000479008 RGPD1P0DJD0 1748 aa18.26■□□□□ 0.51
SMARCAL1-211ENST00000479008 NRAPQ86VF7 1730 aa18.26■□□□□ 0.51
SMARCAL1-211ENST00000479008 IL13P35225 146 aa18.25■□□□□ 0.51
SMARCAL1-211ENST00000479008 MEX3CQ5U5Q3 659 aaKnown RBP18.25■□□□□ 0.51
SMARCAL1-211ENST00000479008 ANKRD24Q8TF21 1146 aa18.25■□□□□ 0.51
SMARCAL1-211ENST00000479008 COL5A2P05997 1499 aaPredicted RBP18.25■□□□□ 0.51
SMARCAL1-211ENST00000479008 U2SURPO15042 1029 aaKnown RBP18.24■□□□□ 0.51
SMARCAL1-211ENST00000479008 C8orf37Q96NL8 207 aa18.24■□□□□ 0.51
SMARCAL1-211ENST00000479008 BTG4Q9NY30 223 aa18.24■□□□□ 0.51
SMARCAL1-211ENST00000479008 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
SMARCAL1-211ENST00000479008 ERBB3P21860 1342 aa18.23■□□□□ 0.51
SMARCAL1-211ENST00000479008 WDR43Q15061 677 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMARCAL1-211ENST00000479008 PNISRQ8TF01 805 aaKnown RBP18.23■□□□□ 0.51
SMARCAL1-211ENST00000479008 CSB-PGBD3P0DP91 1061 aa18.22■□□□□ 0.51
SMARCAL1-211ENST00000479008 NGLY1Q96IV0 654 aa18.22■□□□□ 0.51
SMARCAL1-211ENST00000479008 STRN4Q9NRL3 753 aa18.22■□□□□ 0.51
SMARCAL1-211ENST00000479008 SLIT2O94813 1529 aa18.22■□□□□ 0.51
SMARCAL1-211ENST00000479008 EVA1CP58658 441 aa18.21■□□□□ 0.51
SMARCAL1-211ENST00000479008 FAM9BQ8IZU0 186 aa18.21■□□□□ 0.51
SMARCAL1-211ENST00000479008 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.2■□□□□ 0.5
SMARCAL1-211ENST00000479008 U2AF1L5P0DN76 240 aaPredicted RBP18.2■□□□□ 0.5
SMARCAL1-211ENST00000479008 U2AF1Q01081 240 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMARCAL1-211ENST00000479008 EYA1Q99502 592 aa18.2■□□□□ 0.5
SMARCAL1-211ENST00000479008 WDR17Q8IZU2 1322 aa18.2■□□□□ 0.5
SMARCAL1-211ENST00000479008 IGSF1Q8N6C5 1336 aa18.19■□□□□ 0.5
SMARCAL1-211ENST00000479008 NBPF6Q5VWK0 638 aa18.18■□□□□ 0.5
SMARCAL1-211ENST00000479008 NBPF4Q96M43 638 aa18.18■□□□□ 0.5
SMARCAL1-211ENST00000479008 NLRP2Q9NX02 1062 aa18.18■□□□□ 0.5
SMARCAL1-211ENST00000479008 ADAMTS8Q9UP79 889 aa18.18■□□□□ 0.5
SMARCAL1-211ENST00000479008 HMOX1P09601 288 aa18.17■□□□□ 0.5
SMARCAL1-211ENST00000479008 LARP1Q6PKG0 1096 aaKnown RBP18.17■□□□□ 0.5
SMARCAL1-211ENST00000479008 TOM1L2Q6ZVM7 507 aa18.17■□□□□ 0.5
SMARCAL1-211ENST00000479008 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
SMARCAL1-211ENST00000479008 FNBP4Q8N3X1 1017 aaPredicted RBP18.17■□□□□ 0.5
SMARCAL1-211ENST00000479008 USHBP1Q8N6Y0 703 aa18.17■□□□□ 0.5
SMARCAL1-211ENST00000479008 SULT6B1Q6IMI4 303 aa18.16■□□□□ 0.5
SMARCAL1-211ENST00000479008 AEBP1Q8IUX7 1158 aa18.16■□□□□ 0.5
SMARCAL1-211ENST00000479008 AFF2P51816 1311 aa18.16■□□□□ 0.5
SMARCAL1-211ENST00000479008 CRB1P82279 1406 aa18.15■□□□□ 0.5
SMARCAL1-211ENST00000479008 BCL9LQ86UU0 1499 aa18.15■□□□□ 0.5
SMARCAL1-211ENST00000479008 UNC5CLQ8IV45 518 aa18.15■□□□□ 0.5
SMARCAL1-211ENST00000479008 USP21Q9UK80 565 aa18.15■□□□□ 0.5
SMARCAL1-211ENST00000479008 NCAPD2Q15021 1401 aa18.15■□□□□ 0.5
SMARCAL1-211ENST00000479008 WNK3Q9BYP7 1800 aa18.14■□□□□ 0.5
SMARCAL1-211ENST00000479008 CARD10Q9BWT7 1032 aa18.13■□□□□ 0.49
SMARCAL1-211ENST00000479008 RSPH6AQ9H0K4 717 aa18.13■□□□□ 0.49
SMARCAL1-211ENST00000479008 KDRP35968 1356 aa18.13■□□□□ 0.49
SMARCAL1-211ENST00000479008 FCHSD2O94868 740 aa18.12■□□□□ 0.49
SMARCAL1-211ENST00000479008 CCDC146Q8IYE0 955 aa18.12■□□□□ 0.49
SMARCAL1-211ENST00000479008 PRKAR2BP31323 418 aa18.11■□□□□ 0.49
SMARCAL1-211ENST00000479008 USP35Q9P2H5 1018 aa18.11■□□□□ 0.49
SMARCAL1-211ENST00000479008 CCDC9Q9Y3X0 531 aaKnown RBP18.11■□□□□ 0.49
SMARCAL1-211ENST00000479008 PARP4Q9UKK3 1724 aaKnown RBP18.11■□□□□ 0.49
SMARCAL1-211ENST00000479008 PNNQ9H307 717 aaKnown RBP18.1■□□□□ 0.49
SMARCAL1-211ENST00000479008 SPATA31A5Q5VU36 1347 aa18.09■□□□□ 0.49
SMARCAL1-211ENST00000479008 SPATA31A7Q8IWB4 1347 aa18.09■□□□□ 0.49
SMARCAL1-211ENST00000479008 VPS72Q15906 364 aa18.09■□□□□ 0.49
SMARCAL1-211ENST00000479008 MEGF6O75095 1541 aa18.08■□□□□ 0.49
SMARCAL1-211ENST00000479008 SPATA31A1Q5TZJ5 1347 aa18.08■□□□□ 0.49
SMARCAL1-211ENST00000479008 RUNDC1Q96C34 613 aa18.08■□□□□ 0.48
SMARCAL1-211ENST00000479008 PLEKHF1Q96S99 279 aa18.08■□□□□ 0.48
SMARCAL1-211ENST00000479008 DLG5Q8TDM6 1919 aa18.08■□□□□ 0.48
SMARCAL1-211ENST00000479008 ATRNO75882 1429 aa18.07■□□□□ 0.48
SMARCAL1-211ENST00000479008 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
SMARCAL1-211ENST00000479008 NEFMP07197 916 aa18.07■□□□□ 0.48
SMARCAL1-211ENST00000479008 RAPGEF4Q8WZA2 1011 aa18.07■□□□□ 0.48
SMARCAL1-211ENST00000479008 PKD1L3Q7Z443 1732 aa18.06■□□□□ 0.48
SMARCAL1-211ENST00000479008 GLI3P10071 1580 aa18.06■□□□□ 0.48
SMARCAL1-211ENST00000479008 TCP11L2Q8N4U5 519 aa18.06■□□□□ 0.48
SMARCAL1-211ENST00000479008 TRPC5Q9UL62 973 aaPredicted RBP18.06■□□□□ 0.48
SMARCAL1-211ENST00000479008 IL2RBP14784 551 aa18.05■□□□□ 0.48
SMARCAL1-211ENST00000479008 TATP17735 454 aaPredicted RBP18.05■□□□□ 0.48
SMARCAL1-211ENST00000479008 PHACTR3Q96KR7 559 aa18.05■□□□□ 0.48
SMARCAL1-211ENST00000479008 SENP3-EIF4A1A0A087X0R7 540 aa18.04■□□□□ 0.48
SMARCAL1-211ENST00000479008 ZNF772Q68DY9 489 aaPredicted RBP18.04■□□□□ 0.48
SMARCAL1-211ENST00000479008 THRAP3Q9Y2W1 955 aaKnown RBP18.04■□□□□ 0.48
SMARCAL1-211ENST00000479008 DISP2A7MBM2 1401 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms