RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 NBPF20Q3BBV1 942 aa11.2□□□□□ -0.62
ITGA4-209ENST00000478440 SNRKQ9NRH2 765 aa11.2□□□□□ -0.62
ITGA4-209ENST00000478440 WFS1O76024 890 aa11.19□□□□□ -0.62
ITGA4-209ENST00000478440 GRM5P41594 1212 aa11.19□□□□□ -0.62
ITGA4-209ENST00000478440 MCCD1P59942 119 aaPredicted RBP11.19□□□□□ -0.62
ITGA4-209ENST00000478440 DZIP3Q86Y13 1208 aaKnown RBP11.19□□□□□ -0.62
ITGA4-209ENST00000478440 FSHRP23945 695 aa11.18□□□□□ -0.62
ITGA4-209ENST00000478440 SENP2Q9HC62 589 aa11.18□□□□□ -0.62
ITGA4-209ENST00000478440 WDR4P57081 412 aaKnown RBP11.17□□□□□ -0.62
ITGA4-209ENST00000478440 DHX9Q08211 1270 aaKnown RBP11.17□□□□□ -0.62
ITGA4-209ENST00000478440 KCTD15Q96SI1 283 aaPredicted RBP11.17□□□□□ -0.62
ITGA4-209ENST00000478440 EMILIN1Q9Y6C2 1016 aa11.17□□□□□ -0.62
ITGA4-209ENST00000478440 WIPF1O43516 503 aa11.16□□□□□ -0.62
ITGA4-209ENST00000478440 CCDC116Q8IYX3 515 aa11.16□□□□□ -0.62
ITGA4-209ENST00000478440 OCSTAMPQ9BR26 566 aa11.16□□□□□ -0.62
ITGA4-209ENST00000478440 ATP13A2Q9NQ11 1180 aa11.16□□□□□ -0.62
ITGA4-209ENST00000478440 NR1H3Q13133 447 aa11.15□□□□□ -0.62
ITGA4-209ENST00000478440 CCDC125Q86Z20 511 aa11.15□□□□□ -0.62
ITGA4-209ENST00000478440 KIFC2Q96AC6 838 aa11.15□□□□□ -0.62
ITGA4-209ENST00000478440 TIMP2P16035 220 aa11.14□□□□□ -0.63
ITGA4-209ENST00000478440 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
ITGA4-209ENST00000478440 ZIC2O95409 532 aaPredicted RBP11.13□□□□□ -0.63
ITGA4-209ENST00000478440 FLIIQ13045 1269 aa11.13□□□□□ -0.63
ITGA4-209ENST00000478440 NR3C2P08235 984 aa11.12□□□□□ -0.63
ITGA4-209ENST00000478440 FBXO45P0C2W1 286 aa11.12□□□□□ -0.63
ITGA4-209ENST00000478440 SEPT12Q8IYM1 358 aa11.12□□□□□ -0.63
ITGA4-209ENST00000478440 KLF16Q9BXK1 252 aaPredicted RBP11.12□□□□□ -0.63
ITGA4-209ENST00000478440 SCARF1Q14162 830 aa11.11□□□□□ -0.63
ITGA4-209ENST00000478440 MCM6Q14566 821 aa11.11□□□□□ -0.63
ITGA4-209ENST00000478440 DACH1Q9UI36 760 aa11.11□□□□□ -0.63
ITGA4-209ENST00000478440 PCDHB9Q9Y5E1 797 aa11.11□□□□□ -0.63
ITGA4-209ENST00000478440 C11orf95C9JLR9 678 aaPredicted RBP11.1□□□□□ -0.63
ITGA4-209ENST00000478440 UPP2O95045 317 aa11.1□□□□□ -0.63
ITGA4-209ENST00000478440 RNF20Q5VTR2 975 aa11.09□□□□□ -0.63
ITGA4-209ENST00000478440 ITPKCQ96DU7 683 aa11.09□□□□□ -0.63
ITGA4-209ENST00000478440 GMPR2Q9P2T1 348 aaKnown RBP11.09□□□□□ -0.63
ITGA4-209ENST00000478440 TBC1D2BQ9UPU7 963 aa11.09□□□□□ -0.63
ITGA4-209ENST00000478440 INTS6LQ5JSJ4 861 aaKnown RBP11.08□□□□□ -0.64
ITGA4-209ENST00000478440 PPP1R26Q5T8A7 1209 aaPredicted RBP11.08□□□□□ -0.64
ITGA4-209ENST00000478440 WWC1Q8IX03 1113 aa11.08□□□□□ -0.64
ITGA4-209ENST00000478440 TRIM47Q96LD4 638 aa11.08□□□□□ -0.64
ITGA4-209ENST00000478440 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
ITGA4-209ENST00000478440 WASHC4Q2M389 1173 aa11.07□□□□□ -0.64
ITGA4-209ENST00000478440 MRPL14Q6P1L8 145 aaKnown RBP11.07□□□□□ -0.64
ITGA4-209ENST00000478440 ESPNB1AK53 854 aa11.06□□□□□ -0.64
ITGA4-209ENST00000478440 GPR37L1O60883 481 aa11.06□□□□□ -0.64
ITGA4-209ENST00000478440 EIF4G2P78344 907 aaKnown RBP eCLIP11.06□□□□□ -0.64
ITGA4-209ENST00000478440 SUZ12Q15022 739 aaKnown RBP11.06□□□□□ -0.64
ITGA4-209ENST00000478440 ZFAND3Q9H8U3 227 aa11.06□□□□□ -0.64
ITGA4-209ENST00000478440 RAD21O60216 631 aa11.05□□□□□ -0.64
ITGA4-209ENST00000478440 NFX1Q12986 1120 aaKnown RBP11.05□□□□□ -0.64
ITGA4-209ENST00000478440 MEIOBQ8N635 442 aa11.05□□□□□ -0.64
ITGA4-209ENST00000478440 TRIM46Q7Z4K8 759 aa11.04□□□□□ -0.64
ITGA4-209ENST00000478440 TSEN34Q9BSV6 310 aaKnown RBP11.04□□□□□ -0.64
ITGA4-209ENST00000478440 GDPD2Q9HCC8 539 aa11.04□□□□□ -0.64
ITGA4-209ENST00000478440 BMP1P13497 986 aa11.03□□□□□ -0.64
ITGA4-209ENST00000478440 ABL2P42684 1182 aa11.03□□□□□ -0.64
ITGA4-209ENST00000478440 RAB15P59190 212 aa11.01□□□□□ -0.65
ITGA4-209ENST00000478440 ZFP42Q96MM3 310 aa11.01□□□□□ -0.65
ITGA4-209ENST00000478440 ERVH48-1M5A8F1 160 aa11□□□□□ -0.65
ITGA4-209ENST00000478440 UBTFP17480 764 aaKnown RBP11□□□□□ -0.65
ITGA4-209ENST00000478440 SOX11P35716 441 aa11□□□□□ -0.65
ITGA4-209ENST00000478440 Q6ZVU0 165 aa11□□□□□ -0.65
ITGA4-209ENST00000478440 LINC00528Q8N1L1 170 aa11□□□□□ -0.65
ITGA4-209ENST00000478440 GIGYF1O75420 1035 aaPredicted RBP10.99□□□□□ -0.65
ITGA4-209ENST00000478440 BMP2P12643 396 aa10.99□□□□□ -0.65
ITGA4-209ENST00000478440 IRF5Q13568 498 aa10.99□□□□□ -0.65
ITGA4-209ENST00000478440 PURBQ96QR8 312 aaKnown RBP10.99□□□□□ -0.65
ITGA4-209ENST00000478440 COG6Q9Y2V7 657 aa10.98□□□□□ -0.65
ITGA4-209ENST00000478440 ZNF784Q8NCA9 323 aaPredicted RBP10.97□□□□□ -0.65
ITGA4-209ENST00000478440 ESF1Q9H501 851 aaKnown RBP10.97□□□□□ -0.65
ITGA4-209ENST00000478440 SNRPBP14678 240 aaKnown RBP10.96□□□□□ -0.65
ITGA4-209ENST00000478440 C6orf118Q5T5N4 469 aa10.96□□□□□ -0.65
ITGA4-209ENST00000478440 CEP126Q9P2H0 1117 aa10.96□□□□□ -0.65
ITGA4-209ENST00000478440 TMPRSS4Q9NRS4 437 aa10.95□□□□□ -0.66
ITGA4-209ENST00000478440 ADH1AP07327 375 aa10.94□□□□□ -0.66
ITGA4-209ENST00000478440 VAC14Q08AM6 782 aa10.94□□□□□ -0.66
ITGA4-209ENST00000478440 CBLBQ13191 982 aa10.94□□□□□ -0.66
ITGA4-209ENST00000478440 SEMA3FQ13275 785 aa10.94□□□□□ -0.66
ITGA4-209ENST00000478440 SLFNL1Q499Z3 407 aa10.93□□□□□ -0.66
ITGA4-209ENST00000478440 NACADO15069 1562 aa10.92□□□□□ -0.66
ITGA4-209ENST00000478440 FAM181BA6NEQ2 426 aa10.92□□□□□ -0.66
ITGA4-209ENST00000478440 SPINT1O43278 529 aa10.92□□□□□ -0.66
ITGA4-209ENST00000478440 MAN1A2O60476 641 aa10.92□□□□□ -0.66
ITGA4-209ENST00000478440 CC2D2BQ6DHV5 1058 aa10.92□□□□□ -0.66
ITGA4-209ENST00000478440 LILRA1O75019 489 aa10.91□□□□□ -0.66
ITGA4-209ENST00000478440 CYLDQ9NQC7 956 aa10.91□□□□□ -0.66
ITGA4-209ENST00000478440 PCDHB11Q9Y5F2 797 aa10.91□□□□□ -0.66
ITGA4-209ENST00000478440 MYCP01106 439 aaPredicted RBP10.9□□□□□ -0.66
ITGA4-209ENST00000478440 ERVK-9P63128 1117 aa10.9□□□□□ -0.66
ITGA4-209ENST00000478440 LCE2CQ5TA81 110 aa10.9□□□□□ -0.66
ITGA4-209ENST00000478440 SOS2Q07890 1332 aaPredicted RBP10.89□□□□□ -0.67
ITGA4-209ENST00000478440 TTLL8A6PVC2 850 aa10.89□□□□□ -0.67
ITGA4-209ENST00000478440 RELBQ01201 579 aa10.89□□□□□ -0.67
ITGA4-209ENST00000478440 CYP2U1Q7Z449 544 aa10.89□□□□□ -0.67
ITGA4-209ENST00000478440 NPAS3Q8IXF0 933 aa10.89□□□□□ -0.67
ITGA4-209ENST00000478440 SIRT1Q96EB6 747 aa10.89□□□□□ -0.67
ITGA4-209ENST00000478440 ATP5J2-PTCD1G3V325 749 aa10.88□□□□□ -0.67
ITGA4-209ENST00000478440 PTGIRP43119 386 aa10.88□□□□□ -0.67
ITGA4-209ENST00000478440 RNF135Q8IUD6 432 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms