RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 CD163L1Q9NR16 1453 aa19.36■□□□□ 0.69
RCC1-211ENST00000478232 NME9Q86XW9 330 aa19.36■□□□□ 0.69
RCC1-211ENST00000478232 CDCA7Q9BWT1 371 aaPredicted RBP19.36■□□□□ 0.69
RCC1-211ENST00000478232 CSB-PGBD3P0DP91 1061 aa19.35■□□□□ 0.69
RCC1-211ENST00000478232 CLSPNQ9HAW4 1339 aa19.34■□□□□ 0.69
RCC1-211ENST00000478232 APBA3O96018 575 aa19.34■□□□□ 0.69
RCC1-211ENST00000478232 CARD10Q9BWT7 1032 aa19.34■□□□□ 0.69
RCC1-211ENST00000478232 DISP2A7MBM2 1401 aa19.34■□□□□ 0.69
RCC1-211ENST00000478232 EDC4Q6P2E9 1401 aaKnown RBP19.34■□□□□ 0.69
RCC1-211ENST00000478232 NINLQ9Y2I6 1382 aa19.33■□□□□ 0.69
RCC1-211ENST00000478232 DDB1Q16531 1140 aa19.33■□□□□ 0.68
RCC1-211ENST00000478232 PCGF6Q9BYE7 350 aa19.33■□□□□ 0.68
RCC1-211ENST00000478232 COL18A1P39060 1754 aa19.33■□□□□ 0.68
RCC1-211ENST00000478232 TMF1P82094 1093 aa19.32■□□□□ 0.68
RCC1-211ENST00000478232 CAMKK2Q96RR4 588 aa19.32■□□□□ 0.68
RCC1-211ENST00000478232 A0A1W2PP64 1363 aa19.32■□□□□ 0.68
RCC1-211ENST00000478232 RGPD1P0DJD0 1748 aa19.31■□□□□ 0.68
RCC1-211ENST00000478232 MON2Q7Z3U7 1717 aa19.31■□□□□ 0.68
RCC1-211ENST00000478232 EZH2Q15910 746 aaKnown RBP19.31■□□□□ 0.68
RCC1-211ENST00000478232 NFAT5O94916 1531 aa19.3■□□□□ 0.68
RCC1-211ENST00000478232 PARD3Q8TEW0 1356 aa19.29■□□□□ 0.68
RCC1-211ENST00000478232 USP47Q96K76 1375 aa19.29■□□□□ 0.68
RCC1-211ENST00000478232 EXOC5O00471 708 aa19.28■□□□□ 0.68
RCC1-211ENST00000478232 CDCA8Q53HL2 280 aa19.28■□□□□ 0.68
RCC1-211ENST00000478232 PSDA5PKW4 1024 aaPredicted RBP19.27■□□□□ 0.68
RCC1-211ENST00000478232 PARP4Q9UKK3 1724 aaKnown RBP19.27■□□□□ 0.68
RCC1-211ENST00000478232 CCDC7Q96M83 1385 aa19.27■□□□□ 0.68
RCC1-211ENST00000478232 ABCC6O95255 1503 aa19.26■□□□□ 0.67
RCC1-211ENST00000478232 COG3Q96JB2 828 aa19.26■□□□□ 0.67
RCC1-211ENST00000478232 OVOS2A0A0G2JMS6 1433 aa19.25■□□□□ 0.67
RCC1-211ENST00000478232 OVOS2A0A0J9YW53 1432 aa19.25■□□□□ 0.67
RCC1-211ENST00000478232 OVOS2Q6IE36 1432 aa19.25■□□□□ 0.67
RCC1-211ENST00000478232 SRCAPQ6ZRS2 3230 aa19.25■□□□□ 0.67
RCC1-211ENST00000478232 MARCH10Q8NA82 808 aaPredicted RBP19.25■□□□□ 0.67
RCC1-211ENST00000478232 NLRP2Q9NX02 1062 aa19.25■□□□□ 0.67
RCC1-211ENST00000478232 R3HDM1Q15032 1099 aaKnown RBP19.24■□□□□ 0.67
RCC1-211ENST00000478232 IP6K1Q92551 441 aa19.24■□□□□ 0.67
RCC1-211ENST00000478232 ERBB3P21860 1342 aa19.24■□□□□ 0.67
RCC1-211ENST00000478232 USP54Q70EL1 1684 aa19.24■□□□□ 0.67
RCC1-211ENST00000478232 TNS1Q9HBL0 1735 aaKnown RBP19.23■□□□□ 0.67
RCC1-211ENST00000478232 ANKRD36BQ8N2N9 1353 aa19.23■□□□□ 0.67
RCC1-211ENST00000478232 ANKRD24Q8TF21 1146 aa19.23■□□□□ 0.67
RCC1-211ENST00000478232 BCL11BQ9C0K0 894 aaPredicted RBP19.23■□□□□ 0.67
RCC1-211ENST00000478232 PLSCR1O15162 318 aa19.22■□□□□ 0.67
RCC1-211ENST00000478232 NBPF14Q5TI25 921 aa19.22■□□□□ 0.67
RCC1-211ENST00000478232 BCL9O00512 1426 aa19.21■□□□□ 0.67
RCC1-211ENST00000478232 RGPD5Q99666 1765 aa19.21■□□□□ 0.67
RCC1-211ENST00000478232 FYB1O15117 783 aa19.2■□□□□ 0.66
RCC1-211ENST00000478232 IL2RBP14784 551 aa19.2■□□□□ 0.66
RCC1-211ENST00000478232 AMPHP49418 695 aa19.18■□□□□ 0.66
RCC1-211ENST00000478232 LRRC37A3O60309 1634 aa19.18■□□□□ 0.66
RCC1-211ENST00000478232 PEAK1Q9H792 1746 aa19.17■□□□□ 0.66
RCC1-211ENST00000478232 CCER1Q8TC90 406 aaPredicted RBP19.17■□□□□ 0.66
RCC1-211ENST00000478232 MAP3K19Q56UN5 1328 aa19.17■□□□□ 0.66
RCC1-211ENST00000478232 PTF1AQ7RTS3 328 aa19.16■□□□□ 0.66
RCC1-211ENST00000478232 LTV1Q96GA3 475 aaPredicted RBP19.16■□□□□ 0.66
RCC1-211ENST00000478232 GGNBP2Q9H3C7 697 aa19.16■□□□□ 0.66
RCC1-211ENST00000478232 FBLN1P23142 703 aa19.15■□□□□ 0.66
RCC1-211ENST00000478232 HOXC9P31274 260 aa19.15■□□□□ 0.66
RCC1-211ENST00000478232 LTN1O94822 1766 aa19.14■□□□□ 0.66
RCC1-211ENST00000478232 CARD14Q9BXL6 1004 aa19.13■□□□□ 0.65
RCC1-211ENST00000478232 TNS2Q63HR2 1409 aa19.13■□□□□ 0.65
RCC1-211ENST00000478232 WNK3Q9BYP7 1800 aa19.11■□□□□ 0.65
RCC1-211ENST00000478232 KCNQ2O43526 872 aa19.11■□□□□ 0.65
RCC1-211ENST00000478232 PROM2Q8N271 834 aa19.11■□□□□ 0.65
RCC1-211ENST00000478232 EIF4G2P78344 907 aaKnown RBP eCLIP19.1■□□□□ 0.65
RCC1-211ENST00000478232 RRS1Q15050 365 aaKnown RBP19.1■□□□□ 0.65
RCC1-211ENST00000478232 LRP5O75197 1615 aa19.1■□□□□ 0.65
RCC1-211ENST00000478232 SBF2Q86WG5 1849 aa19.09■□□□□ 0.65
RCC1-211ENST00000478232 RREB1Q92766 1687 aa19.09■□□□□ 0.65
RCC1-211ENST00000478232 RTL1A6NKG5 1358 aa19.08■□□□□ 0.65
RCC1-211ENST00000478232 TXNRD1Q16881 649 aa19.08■□□□□ 0.64
RCC1-211ENST00000478232 DDX54Q8TDD1 881 aaKnown RBP19.08■□□□□ 0.64
RCC1-211ENST00000478232 ACSBG1Q96GR2 724 aa19.08■□□□□ 0.64
RCC1-211ENST00000478232 NBPF6Q5VWK0 638 aa19.06■□□□□ 0.64
RCC1-211ENST00000478232 ZCRB1Q8TBF4 217 aaKnown RBP19.06■□□□□ 0.64
RCC1-211ENST00000478232 NBPF4Q96M43 638 aa19.06■□□□□ 0.64
RCC1-211ENST00000478232 KIF24Q5T7B8 1368 aa19.06■□□□□ 0.64
RCC1-211ENST00000478232 NUP188Q5SRE5 1749 aa19.05■□□□□ 0.64
RCC1-211ENST00000478232 HSP90AB2PQ58FF8 381 aa19.05■□□□□ 0.64
RCC1-211ENST00000478232 RGPD3A6NKT7 1758 aaPredicted RBP19.04■□□□□ 0.64
RCC1-211ENST00000478232 RGPD4Q7Z3J3 1758 aa19.04■□□□□ 0.64
RCC1-211ENST00000478232 HSPA5P11021 654 aaKnown RBP19.04■□□□□ 0.64
RCC1-211ENST00000478232 POLR3GLQ9BT43 218 aa19.04■□□□□ 0.64
RCC1-211ENST00000478232 NSD3Q9BZ95 1437 aa19.04■□□□□ 0.64
RCC1-211ENST00000478232 SPON1Q9HCB6 807 aa19.04■□□□□ 0.64
RCC1-211ENST00000478232 INSRP06213 1382 aa19.04■□□□□ 0.64
RCC1-211ENST00000478232 CGNL1Q0VF96 1302 aa19.03■□□□□ 0.64
RCC1-211ENST00000478232 STK32BQ9NY57 414 aa19.03■□□□□ 0.64
RCC1-211ENST00000478232 FAM208AQ9UK61 1670 aaKnown RBP19.02■□□□□ 0.64
RCC1-211ENST00000478232 SMG6Q86US8 1419 aaKnown RBP19.02■□□□□ 0.64
RCC1-211ENST00000478232 RAPGEF4Q8WZA2 1011 aa19.02■□□□□ 0.64
RCC1-211ENST00000478232 ANO8Q9HCE9 1232 aaPredicted RBP19.02■□□□□ 0.64
RCC1-211ENST00000478232 FLT4P35916 1363 aa19.02■□□□□ 0.64
RCC1-211ENST00000478232 SLC15A2Q16348 729 aa19.01■□□□□ 0.63
RCC1-211ENST00000478232 TATP17735 454 aaPredicted RBP18.99■□□□□ 0.63
RCC1-211ENST00000478232 PRIM1P49642 420 aaKnown RBP18.99■□□□□ 0.63
RCC1-211ENST00000478232 USHBP1Q8N6Y0 703 aa18.99■□□□□ 0.63
RCC1-211ENST00000478232 EMILIN1Q9Y6C2 1016 aa18.99■□□□□ 0.63
RCC1-211ENST00000478232 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms