RNA–Protein interactions for RNA: ENST00000478089.1

FBXO42-204, Transcript of F-box protein 42, humanhuman

TSL 1 (best)

Gene FBXO42, Length 2,920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO42-204ENST00000478089 LARGE2Q8N3Y3 721 aa9.93□□□□□ -0.82
FBXO42-204ENST00000478089 BANK1Q8NDB2 785 aa9.93□□□□□ -0.82
FBXO42-204ENST00000478089 PPP1R12CQ9BZL4 782 aa9.93□□□□□ -0.82
FBXO42-204ENST00000478089 PHF8Q9UPP1 1060 aa9.93□□□□□ -0.82
FBXO42-204ENST00000478089 ABCB7O75027 752 aa9.92□□□□□ -0.82
FBXO42-204ENST00000478089 PARNO95453 639 aaKnown RBP9.92□□□□□ -0.82
FBXO42-204ENST00000478089 PPRC1Q5VV67 1664 aaKnown RBP9.91□□□□□ -0.82
FBXO42-204ENST00000478089 PDIA6Q15084 440 aa9.91□□□□□ -0.82
FBXO42-204ENST00000478089 LONRF3Q496Y0 759 aa9.91□□□□□ -0.82
FBXO42-204ENST00000478089 PHLDB3Q6NSJ2 640 aa9.91□□□□□ -0.82
FBXO42-204ENST00000478089 NPAS4Q8IUM7 802 aa9.91□□□□□ -0.82
FBXO42-204ENST00000478089 EMILIN3Q9NT22 766 aa9.91□□□□□ -0.82
FBXO42-204ENST00000478089 ARHGEF5Q12774 1597 aa9.91□□□□□ -0.82
FBXO42-204ENST00000478089 NGEFQ8N5V2 710 aa9.9□□□□□ -0.82
FBXO42-204ENST00000478089 TMUB1Q9BVT8 246 aa9.9□□□□□ -0.82
FBXO42-204ENST00000478089 ANKRD30BQ9BXX2 1392 aa9.9□□□□□ -0.82
FBXO42-204ENST00000478089 ANP32CO43423 234 aa9.9□□□□□ -0.82
FBXO42-204ENST00000478089 ZNF500O60304 480 aaPredicted RBP9.9□□□□□ -0.82
FBXO42-204ENST00000478089 C7P10643 843 aa9.9□□□□□ -0.82
FBXO42-204ENST00000478089 LNPKQ9C0E8 428 aa9.9□□□□□ -0.82
FBXO42-204ENST00000478089 ANKRD30AQ9BXX3 1397 aa9.9□□□□□ -0.82
FBXO42-204ENST00000478089 DHX16O60231 1041 aaKnown RBP9.89□□□□□ -0.83
FBXO42-204ENST00000478089 PREX2Q70Z35 1606 aa9.89□□□□□ -0.83
FBXO42-204ENST00000478089 PZPP20742 1482 aa9.89□□□□□ -0.83
FBXO42-204ENST00000478089 RPRD2Q5VT52 1461 aaKnown RBP9.89□□□□□ -0.83
FBXO42-204ENST00000478089 WASHC2CQ9Y4E1 1318 aa9.89□□□□□ -0.83
FBXO42-204ENST00000478089 GOLGA6CA6NDK9 693 aa9.89□□□□□ -0.83
FBXO42-204ENST00000478089 GOLGA6BA6NDN3 693 aa9.89□□□□□ -0.83
FBXO42-204ENST00000478089 GOLGA6DP0CG33 693 aa9.89□□□□□ -0.83
FBXO42-204ENST00000478089 HDAC1Q13547 482 aaPredicted RBP9.89□□□□□ -0.83
FBXO42-204ENST00000478089 PDCL3Q9H2J4 239 aa9.89□□□□□ -0.83
FBXO42-204ENST00000478089 GOLGA6AQ9NYA3 693 aa9.89□□□□□ -0.83
FBXO42-204ENST00000478089 SCP2P22307 547 aa9.89□□□□□ -0.83
FBXO42-204ENST00000478089 CALRP27797 417 aaKnown RBP9.89□□□□□ -0.83
FBXO42-204ENST00000478089 SETDB1Q15047 1291 aa9.89□□□□□ -0.83
FBXO42-204ENST00000478089 ABCC2Q92887 1545 aa9.88□□□□□ -0.83
FBXO42-204ENST00000478089 RHBDL3P58872 404 aa9.88□□□□□ -0.83
FBXO42-204ENST00000478089 PDAP1Q13442 181 aaKnown RBP9.88□□□□□ -0.83
FBXO42-204ENST00000478089 MYSM1Q5VVJ2 828 aa9.88□□□□□ -0.83
FBXO42-204ENST00000478089 ZNF280DQ6N043 979 aa9.88□□□□□ -0.83
FBXO42-204ENST00000478089 DDX46Q7L014 1031 aaKnown RBP9.88□□□□□ -0.83
FBXO42-204ENST00000478089 ZNF513Q8N8E2 541 aaPredicted RBP9.88□□□□□ -0.83
FBXO42-204ENST00000478089 NUB1Q9Y5A7 615 aa9.88□□□□□ -0.83
FBXO42-204ENST00000478089 CDC42BPBQ9Y5S2 1711 aa9.88□□□□□ -0.83
FBXO42-204ENST00000478089 PALM3A6NDB9 673 aaPredicted RBP9.88□□□□□ -0.83
FBXO42-204ENST00000478089 MKL1Q969V6 931 aa9.88□□□□□ -0.83
FBXO42-204ENST00000478089 BEGAINQ9BUH8 593 aa9.88□□□□□ -0.83
FBXO42-204ENST00000478089 LMOD1P29536 600 aaPredicted RBP9.87□□□□□ -0.83
FBXO42-204ENST00000478089 NBPF10Q6P3W6 841 aaKnown RBP9.87□□□□□ -0.83
FBXO42-204ENST00000478089 VAMP1P23763 118 aa9.87□□□□□ -0.83
FBXO42-204ENST00000478089 CCDC181Q5TID7 509 aa9.87□□□□□ -0.83
FBXO42-204ENST00000478089 NBPF6Q5VWK0 638 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 NBPF5PQ86XG9 351 aaPredicted RBP9.86□□□□□ -0.83
FBXO42-204ENST00000478089 EFCAB3Q8N7B9 438 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 NBPF4Q96M43 638 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 PCDHB8Q9UN66 801 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 PCDHB13Q9Y5F0 798 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 C9orf84Q5VXU9 1444 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 ERCC6L2Q5T890 1561 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 MBD5Q9P267 1494 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 EPB41L2O43491 1005 aaKnown RBP9.86□□□□□ -0.83
FBXO42-204ENST00000478089 MAP2K1Q02750 393 aaPredicted RBP9.86□□□□□ -0.83
FBXO42-204ENST00000478089 PSME1Q06323 249 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 HIC1Q14526 733 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 GET4Q7L5D6 327 aaPredicted RBP9.86□□□□□ -0.83
FBXO42-204ENST00000478089 SAMD9LQ8IVG5 1584 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 CFAP74Q9C0B2 1584 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 KDM5DQ9BY66 1539 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 TEX14Q8IWB6 1497 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 MTA1Q13330 715 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 EGFLAMQ63HQ2 1017 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 ANKRD23Q86SG2 305 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 SMAP1Q8IYB5 467 aaPredicted RBP9.86□□□□□ -0.83
FBXO42-204ENST00000478089 MSL3Q8N5Y2 521 aaKnown RBP9.86□□□□□ -0.83
FBXO42-204ENST00000478089 ATL2Q8NHH9 583 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 YY1AP1Q9H869 796 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 PNMA2Q9UL42 364 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 ANKRD50Q9ULJ7 1429 aa9.86□□□□□ -0.83
FBXO42-204ENST00000478089 FARP1Q9Y4F1 1045 aaPredicted RBP9.86□□□□□ -0.83
FBXO42-204ENST00000478089 MCCD1P59942 119 aaPredicted RBP9.85□□□□□ -0.83
FBXO42-204ENST00000478089 KIF4AO95239 1232 aa9.85□□□□□ -0.83
FBXO42-204ENST00000478089 ATG7O95352 703 aa9.85□□□□□ -0.83
FBXO42-204ENST00000478089 DDX10Q13206 875 aaKnown RBP9.85□□□□□ -0.83
FBXO42-204ENST00000478089 MAMSTRQ6ZN01 415 aa9.85□□□□□ -0.83
FBXO42-204ENST00000478089 CXorf38Q8TB03 319 aa9.85□□□□□ -0.83
FBXO42-204ENST00000478089 SPACA7Q96KW9 195 aa9.85□□□□□ -0.83
FBXO42-204ENST00000478089 GEMIN8Q9NWZ8 242 aaKnown RBP9.85□□□□□ -0.83
FBXO42-204ENST00000478089 KIAA1107Q9UPP5 1409 aa9.84□□□□□ -0.83
FBXO42-204ENST00000478089 ANKRD33BA6NCL7 494 aa9.84□□□□□ -0.83
FBXO42-204ENST00000478089 ANP32AP39687 249 aaKnown RBP9.84□□□□□ -0.83
FBXO42-204ENST00000478089 TAF3Q5VWG9 929 aa9.84□□□□□ -0.83
FBXO42-204ENST00000478089 PHOX2BQ99453 314 aa9.84□□□□□ -0.83
FBXO42-204ENST00000478089 UBA5Q9GZZ9 404 aa9.84□□□□□ -0.83
FBXO42-204ENST00000478089 GRXCR2A6NFK2 248 aa9.84□□□□□ -0.83
FBXO42-204ENST00000478089 SSTR3P32745 418 aaPredicted RBP9.84□□□□□ -0.83
FBXO42-204ENST00000478089 ZFYVE27Q5T4F4 411 aa9.84□□□□□ -0.83
FBXO42-204ENST00000478089 UTP14CQ5TAP6 766 aaKnown RBP9.84□□□□□ -0.83
FBXO42-204ENST00000478089 C9orf131Q5VYM1 1079 aa9.84□□□□□ -0.83
FBXO42-204ENST00000478089 NLGN1Q8N2Q7 840 aa9.84□□□□□ -0.83
FBXO42-204ENST00000478089 NOP58Q9Y2X3 529 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms