RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 RB1CC1Q8TDY2 1594 aa9.58□□□□□ -0.88
VPS50-214ENST00000477935 RAD21O60216 631 aa9.57□□□□□ -0.88
VPS50-214ENST00000477935 NR3C2P08235 984 aa9.57□□□□□ -0.88
VPS50-214ENST00000477935 CTC1Q2NKJ3 1217 aa9.57□□□□□ -0.88
VPS50-214ENST00000477935 NBPF20Q3BBV1 942 aa9.57□□□□□ -0.88
VPS50-214ENST00000477935 CRIPAKQ8N1N5 446 aa9.57□□□□□ -0.88
VPS50-214ENST00000477935 ZNF330Q9Y3S2 320 aaPredicted RBP9.57□□□□□ -0.88
VPS50-214ENST00000477935 ST8SIA5O15466 376 aa9.56□□□□□ -0.88
VPS50-214ENST00000477935 SMCPP49901 116 aaPredicted RBP9.56□□□□□ -0.88
VPS50-214ENST00000477935 AAASQ9NRG9 546 aa9.56□□□□□ -0.88
VPS50-214ENST00000477935 AXIN1O15169 862 aa9.55□□□□□ -0.88
VPS50-214ENST00000477935 VAC14Q08AM6 782 aa9.55□□□□□ -0.88
VPS50-214ENST00000477935 WASHC4Q2M389 1173 aa9.55□□□□□ -0.88
VPS50-214ENST00000477935 CCDC116Q8IYX3 515 aa9.54□□□□□ -0.88
VPS50-214ENST00000477935 ZNF592Q92610 1267 aa9.54□□□□□ -0.88
VPS50-214ENST00000477935 CLUAP1Q96AJ1 413 aa9.54□□□□□ -0.88
VPS50-214ENST00000477935 GTF3C3Q9Y5Q9 886 aa9.54□□□□□ -0.88
VPS50-214ENST00000477935 MCCD1P59942 119 aaPredicted RBP9.53□□□□□ -0.88
VPS50-214ENST00000477935 INTS6LQ5JSJ4 861 aaKnown RBP9.53□□□□□ -0.88
VPS50-214ENST00000477935 KLF16Q9BXK1 252 aaPredicted RBP9.53□□□□□ -0.88
VPS50-214ENST00000477935 ESPNB1AK53 854 aa9.52□□□□□ -0.89
VPS50-214ENST00000477935 TIMP2P16035 220 aa9.52□□□□□ -0.89
VPS50-214ENST00000477935 WDR4P57081 412 aaKnown RBP9.52□□□□□ -0.89
VPS50-214ENST00000477935 CAPN5O15484 640 aaPredicted RBP9.51□□□□□ -0.89
VPS50-214ENST00000477935 ZIC2O95409 532 aaPredicted RBP9.51□□□□□ -0.89
VPS50-214ENST00000477935 EIF4G2P78344 907 aaKnown RBP eCLIP9.51□□□□□ -0.89
VPS50-214ENST00000477935 WWC1Q8IX03 1113 aa9.51□□□□□ -0.89
VPS50-214ENST00000477935 ITPKCQ96DU7 683 aa9.51□□□□□ -0.89
VPS50-214ENST00000477935 GIGYF1O75420 1035 aaPredicted RBP9.5□□□□□ -0.89
VPS50-214ENST00000477935 RAB15P59190 212 aa9.5□□□□□ -0.89
VPS50-214ENST00000477935 PPP1R26Q5T8A7 1209 aaPredicted RBP9.5□□□□□ -0.89
VPS50-214ENST00000477935 SEPT12Q8IYM1 358 aa9.5□□□□□ -0.89
VPS50-214ENST00000477935 DACH1Q9UI36 760 aa9.5□□□□□ -0.89
VPS50-214ENST00000477935 EMILIN1Q9Y6C2 1016 aa9.5□□□□□ -0.89
VPS50-214ENST00000477935 DHX9Q08211 1270 aaKnown RBP9.49□□□□□ -0.89
VPS50-214ENST00000477935 ZFAND3Q9H8U3 227 aa9.49□□□□□ -0.89
VPS50-214ENST00000477935 CEP126Q9P2H0 1117 aa9.48□□□□□ -0.89
VPS50-214ENST00000477935 ERVH48-1M5A8F1 160 aa9.47□□□□□ -0.89
VPS50-214ENST00000477935 PROSER2Q86WR7 435 aaPredicted RBP9.47□□□□□ -0.89
VPS50-214ENST00000477935 FNBP4Q8N3X1 1017 aaPredicted RBP9.47□□□□□ -0.89
VPS50-214ENST00000477935 PGPEP1Q9NXJ5 209 aa9.47□□□□□ -0.89
VPS50-214ENST00000477935 A6NJR5 290 aa9.46□□□□□ -0.9
VPS50-214ENST00000477935 SOX11P35716 441 aa9.46□□□□□ -0.9
VPS50-214ENST00000477935 TMPRSS4Q9NRS4 437 aa9.46□□□□□ -0.9
VPS50-214ENST00000477935 BMP1P13497 986 aa9.45□□□□□ -0.9
VPS50-214ENST00000477935 SEMA3FQ13275 785 aa9.45□□□□□ -0.9
VPS50-214ENST00000477935 RNF20Q5VTR2 975 aa9.45□□□□□ -0.9
VPS50-214ENST00000477935 ATP13A2Q9NQ11 1180 aa9.45□□□□□ -0.9
VPS50-214ENST00000477935 POM121CA8CG34 1229 aa9.44□□□□□ -0.9
VPS50-214ENST00000477935 ZNF784Q8NCA9 323 aaPredicted RBP9.44□□□□□ -0.9
VPS50-214ENST00000477935 TRIM46Q7Z4K8 759 aa9.43□□□□□ -0.9
VPS50-214ENST00000477935 CCDC125Q86Z20 511 aa9.43□□□□□ -0.9
VPS50-214ENST00000477935 MEIOBQ8N635 442 aa9.43□□□□□ -0.9
VPS50-214ENST00000477935 ALG2Q9H553 416 aa9.43□□□□□ -0.9
VPS50-214ENST00000477935 NACADO15069 1562 aa9.42□□□□□ -0.9
VPS50-214ENST00000477935 SLFNL1Q499Z3 407 aa9.42□□□□□ -0.9
VPS50-214ENST00000477935 CBLBQ13191 982 aa9.41□□□□□ -0.9
VPS50-214ENST00000477935 MRPL14Q6P1L8 145 aaKnown RBP9.41□□□□□ -0.9
VPS50-214ENST00000477935 Q6ZVU0 165 aa9.41□□□□□ -0.9
VPS50-214ENST00000477935 PHTF2Q8N3S3 785 aa9.41□□□□□ -0.9
VPS50-214ENST00000477935 GMPR2Q9P2T1 348 aaKnown RBP9.41□□□□□ -0.9
VPS50-214ENST00000477935 PCDHB11Q9Y5F2 797 aa9.41□□□□□ -0.9
VPS50-214ENST00000477935 POTECB2RU33 542 aa9.4□□□□□ -0.9
VPS50-214ENST00000477935 LILRA1O75019 489 aa9.4□□□□□ -0.9
VPS50-214ENST00000477935 RNF135Q8IUD6 432 aa9.4□□□□□ -0.9
VPS50-214ENST00000477935 ADAMTS19Q8TE59 1207 aa9.4□□□□□ -0.9
VPS50-214ENST00000477935 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
VPS50-214ENST00000477935 CYLDQ9NQC7 956 aa9.4□□□□□ -0.9
VPS50-214ENST00000477935 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
VPS50-214ENST00000477935 ADD1P35611 737 aaKnown RBP9.38□□□□□ -0.91
VPS50-214ENST00000477935 ERVK-9P63128 1117 aa9.38□□□□□ -0.91
VPS50-214ENST00000477935 SCARF1Q14162 830 aa9.38□□□□□ -0.91
VPS50-214ENST00000477935 TRIM52Q96A61 297 aa9.38□□□□□ -0.91
VPS50-214ENST00000477935 ZFP42Q96MM3 310 aa9.38□□□□□ -0.91
VPS50-214ENST00000477935 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
VPS50-214ENST00000477935 UPP2O95045 317 aa9.37□□□□□ -0.91
VPS50-214ENST00000477935 SCTRP47872 440 aa9.37□□□□□ -0.91
VPS50-214ENST00000477935 TSGA10IPQ3SY00 556 aa9.37□□□□□ -0.91
VPS50-214ENST00000477935 HDGFL1Q5TGJ6 251 aa9.37□□□□□ -0.91
VPS50-214ENST00000477935 ZNF787Q6DD87 383 aa9.37□□□□□ -0.91
VPS50-214ENST00000477935 CC2D2BQ6DHV5 1058 aa9.37□□□□□ -0.91
VPS50-214ENST00000477935 TSEN34Q9BSV6 310 aaKnown RBP9.37□□□□□ -0.91
VPS50-214ENST00000477935 CDCA7Q9BWT1 371 aaPredicted RBP9.37□□□□□ -0.91
VPS50-214ENST00000477935 SENP2Q9HC62 589 aa9.37□□□□□ -0.91
VPS50-214ENST00000477935 CHIC2Q9UKJ5 165 aa9.37□□□□□ -0.91
VPS50-214ENST00000477935 PIK3CDO00329 1044 aa9.36□□□□□ -0.91
VPS50-214ENST00000477935 TRAK2O60296 914 aa9.36□□□□□ -0.91
VPS50-214ENST00000477935 C6orf118Q5T5N4 469 aa9.36□□□□□ -0.91
VPS50-214ENST00000477935 GLMNQ92990 594 aa9.36□□□□□ -0.91
VPS50-214ENST00000477935 ZMYND15Q9H091 742 aa9.36□□□□□ -0.91
VPS50-214ENST00000477935 DOLKQ9UPQ8 538 aa9.36□□□□□ -0.91
VPS50-214ENST00000477935 CECR2Q9BXF3 1484 aa9.35□□□□□ -0.91
VPS50-214ENST00000477935 C11orf95C9JLR9 678 aaPredicted RBP9.35□□□□□ -0.91
VPS50-214ENST00000477935 ADH1AP07327 375 aa9.35□□□□□ -0.91
VPS50-214ENST00000477935 TRIM47Q96LD4 638 aa9.35□□□□□ -0.91
VPS50-214ENST00000477935 AGBL1Q96MI9 1066 aa9.35□□□□□ -0.91
VPS50-214ENST00000477935 BMP2P12643 396 aa9.34□□□□□ -0.91
VPS50-214ENST00000477935 RELBQ01201 579 aa9.34□□□□□ -0.91
VPS50-214ENST00000477935 PLPP7Q8NBV4 271 aa9.34□□□□□ -0.91
VPS50-214ENST00000477935 KIFC2Q96AC6 838 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms