RNA–Protein interactions for RNA: ENST00000477856.1

CNTN3-202, Transcript of contactin 3, humanhuman

TSL 3

Gene CNTN3, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-202ENST00000477856 PPARGC1BQ86YN6 1023 aaKnown RBP6.75□□□□□ -1.33
CNTN3-202ENST00000477856 SPSB2Q99619 263 aa6.75□□□□□ -1.33
CNTN3-202ENST00000477856 RBM27Q9P2N5 1060 aaKnown RBP6.75□□□□□ -1.33
CNTN3-202ENST00000477856 RRBP1Q9P2E9 1410 aaKnown RBP6.75□□□□□ -1.33
CNTN3-202ENST00000477856 FRMPD1Q5SYB0 1578 aa6.74□□□□□ -1.33
CNTN3-202ENST00000477856 HECW2Q9P2P5 1572 aa6.74□□□□□ -1.33
CNTN3-202ENST00000477856 MAGI2Q86UL8 1455 aa6.74□□□□□ -1.33
CNTN3-202ENST00000477856 MBD5Q9P267 1494 aa6.74□□□□□ -1.33
CNTN3-202ENST00000477856 MRGPRX2Q96LB1 330 aa6.74□□□□□ -1.33
CNTN3-202ENST00000477856 DNMT1P26358 1616 aaKnown RBP6.74□□□□□ -1.33
CNTN3-202ENST00000477856 CROCC2H7BZ55 1655 aa6.74□□□□□ -1.33
CNTN3-202ENST00000477856 COL17A1Q9UMD9 1497 aaPredicted RBP6.73□□□□□ -1.33
CNTN3-202ENST00000477856 SHANK2Q9UPX8 1470 aa6.73□□□□□ -1.33
CNTN3-202ENST00000477856 ARHGEF12Q9NZN5 1544 aa6.73□□□□□ -1.33
CNTN3-202ENST00000477856 SCUBE3Q8IX30 993 aa6.73□□□□□ -1.33
CNTN3-202ENST00000477856 INO80Q9ULG1 1556 aaPredicted RBP6.73□□□□□ -1.33
CNTN3-202ENST00000477856 MAST1Q9Y2H9 1570 aa6.73□□□□□ -1.33
CNTN3-202ENST00000477856 ZNF644Q9H582 1327 aaPredicted RBP6.73□□□□□ -1.33
CNTN3-202ENST00000477856 MLH3Q9UHC1 1453 aa6.73□□□□□ -1.33
CNTN3-202ENST00000477856 ZFYVE16Q7Z3T8 1539 aa6.72□□□□□ -1.33
CNTN3-202ENST00000477856 ARHGEF40Q8TER5 1519 aa6.72□□□□□ -1.33
CNTN3-202ENST00000477856 BMP1P13497 986 aa6.72□□□□□ -1.33
CNTN3-202ENST00000477856 FAM50AQ14320 339 aaKnown RBP6.72□□□□□ -1.33
CNTN3-202ENST00000477856 HS6ST3Q8IZP7 471 aa6.72□□□□□ -1.33
CNTN3-202ENST00000477856 DAPK1P53355 1430 aa6.72□□□□□ -1.33
CNTN3-202ENST00000477856 TRAPPC8Q9Y2L5 1435 aa6.72□□□□□ -1.33
CNTN3-202ENST00000477856 ATP7AQ04656 1500 aa6.71□□□□□ -1.33
CNTN3-202ENST00000477856 PLXNC1O60486 1568 aa6.71□□□□□ -1.34
CNTN3-202ENST00000477856 RTEL1-TNFRSF6BF6WH68 1400 aa6.71□□□□□ -1.34
CNTN3-202ENST00000477856 C9orf84Q5VXU9 1444 aa6.71□□□□□ -1.34
CNTN3-202ENST00000477856 RAPGEF3O95398 923 aa6.71□□□□□ -1.34
CNTN3-202ENST00000477856 TSPY4P0CV99 314 aa6.71□□□□□ -1.34
CNTN3-202ENST00000477856 TSPY10P0CW01 314 aa6.71□□□□□ -1.34
CNTN3-202ENST00000477856 HNRNPMP52272 730 aaKnown RBP eCLIP6.71□□□□□ -1.34
CNTN3-202ENST00000477856 TRIM46Q7Z4K8 759 aa6.71□□□□□ -1.34
CNTN3-202ENST00000477856 KRTAP4-12Q9BQ66 201 aa6.71□□□□□ -1.34
CNTN3-202ENST00000477856 SPAG9O60271 1321 aaKnown RBP6.71□□□□□ -1.34
CNTN3-202ENST00000477856 AFAP1Q8N556 730 aa6.7□□□□□ -1.34
CNTN3-202ENST00000477856 ADGBQ8N7X0 1667 aa6.7□□□□□ -1.34
CNTN3-202ENST00000477856 REREQ9P2R6 1566 aa6.69□□□□□ -1.34
CNTN3-202ENST00000477856 DIP2CQ9Y2E4 1556 aa6.69□□□□□ -1.34
CNTN3-202ENST00000477856 KIDINS220Q9ULH0 1771 aa6.69□□□□□ -1.34
CNTN3-202ENST00000477856 ABCA6Q8N139 1617 aa6.69□□□□□ -1.34
CNTN3-202ENST00000477856 ABCC5O15440 1437 aa6.69□□□□□ -1.34
CNTN3-202ENST00000477856 ADGRL2O95490 1459 aa6.69□□□□□ -1.34
CNTN3-202ENST00000477856 CFHP08603 1231 aa6.69□□□□□ -1.34
CNTN3-202ENST00000477856 MARSP56192 900 aaKnown RBP6.69□□□□□ -1.34
CNTN3-202ENST00000477856 REPIN1Q9BWE0 567 aaKnown RBP6.69□□□□□ -1.34
CNTN3-202ENST00000477856 ATP10AO60312 1499 aa6.68□□□□□ -1.34
CNTN3-202ENST00000477856 K7ELQ4 463 aaPredicted RBP6.68□□□□□ -1.34
CNTN3-202ENST00000477856 ROCK1Q13464 1354 aa6.68□□□□□ -1.34
CNTN3-202ENST00000477856 ANKRD30AQ9BXX3 1397 aa6.68□□□□□ -1.34
CNTN3-202ENST00000477856 DUOX2Q9NRD8 1548 aa6.67□□□□□ -1.34
CNTN3-202ENST00000477856 CAPN5O15484 640 aaPredicted RBP6.67□□□□□ -1.34
CNTN3-202ENST00000477856 EYA1Q99502 592 aa6.67□□□□□ -1.34
CNTN3-202ENST00000477856 YEATS2Q9ULM3 1422 aa6.67□□□□□ -1.34
CNTN3-202ENST00000477856 A2MP01023 1474 aa6.66□□□□□ -1.34
CNTN3-202ENST00000477856 AGLP35573 1532 aa6.66□□□□□ -1.34
CNTN3-202ENST00000477856 EIF2AK4Q9P2K8 1649 aaKnown RBP6.66□□□□□ -1.34
CNTN3-202ENST00000477856 GALNT6Q8NCL4 622 aa6.66□□□□□ -1.34
CNTN3-202ENST00000477856 SCARF2Q96GP6 870 aaPredicted RBP6.66□□□□□ -1.34
CNTN3-202ENST00000477856 SPOCK3Q9BQ16 436 aa6.66□□□□□ -1.34
CNTN3-202ENST00000477856 KIF15Q9NS87 1388 aa6.66□□□□□ -1.34
CNTN3-202ENST00000477856 NCOA1Q15788 1441 aa6.66□□□□□ -1.34
CNTN3-202ENST00000477856 ERBINQ96RT1 1412 aa6.66□□□□□ -1.34
CNTN3-202ENST00000477856 GCC2Q8IWJ2 1684 aa6.65□□□□□ -1.34
CNTN3-202ENST00000477856 BCORL1Q5H9F3 1711 aa6.65□□□□□ -1.34
CNTN3-202ENST00000477856 SVOPQ8N4V2 548 aa6.65□□□□□ -1.34
CNTN3-202ENST00000477856 ZFP42Q96MM3 310 aa6.65□□□□□ -1.34
CNTN3-202ENST00000477856 DHX29Q7Z478 1369 aaKnown RBP6.65□□□□□ -1.35
CNTN3-202ENST00000477856 PTPRKQ15262 1439 aa6.65□□□□□ -1.35
CNTN3-202ENST00000477856 ITGAEP38570 1179 aa6.64□□□□□ -1.35
CNTN3-202ENST00000477856 TTC13Q8NBP0 860 aa6.64□□□□□ -1.35
CNTN3-202ENST00000477856 CHIC2Q9UKJ5 165 aa6.64□□□□□ -1.35
CNTN3-202ENST00000477856 HFM1A2PYH4 1435 aa6.64□□□□□ -1.35
CNTN3-202ENST00000477856 ALDH1A1P00352 501 aa6.63□□□□□ -1.35
CNTN3-202ENST00000477856 TRIM26Q12899 539 aaPredicted RBP6.63□□□□□ -1.35
CNTN3-202ENST00000477856 TRIM32Q13049 653 aa6.63□□□□□ -1.35
CNTN3-202ENST00000477856 CAMK2BQ13554 666 aa6.63□□□□□ -1.35
CNTN3-202ENST00000477856 PADI6Q6TGC4 694 aa6.63□□□□□ -1.35
CNTN3-202ENST00000477856 FAM135AQ9P2D6 1515 aa6.63□□□□□ -1.35
CNTN3-202ENST00000477856 ANKRD50Q9ULJ7 1429 aa6.63□□□□□ -1.35
CNTN3-202ENST00000477856 RNF17Q9BXT8 1623 aaKnown RBP6.62□□□□□ -1.35
CNTN3-202ENST00000477856 ACIN1Q9UKV3 1341 aaKnown RBP6.62□□□□□ -1.35
CNTN3-202ENST00000477856 PLA2G4EQ3MJ16 856 aa6.62□□□□□ -1.35
CNTN3-202ENST00000477856 CNTNAP3BQ96NU0 1288 aa6.62□□□□□ -1.35
CNTN3-202ENST00000477856 CNTNAP3Q9BZ76 1288 aa6.62□□□□□ -1.35
CNTN3-202ENST00000477856 RRP7BPQ9NSQ0 103 aa6.62□□□□□ -1.35
CNTN3-202ENST00000477856 SIGLEC1Q9BZZ2 1709 aa6.62□□□□□ -1.35
CNTN3-202ENST00000477856 DEPDC5O75140 1603 aa6.61□□□□□ -1.35
CNTN3-202ENST00000477856 PRDM15P57071 1507 aaPredicted RBP6.61□□□□□ -1.35
CNTN3-202ENST00000477856 NAIPQ13075 1403 aa6.61□□□□□ -1.35
CNTN3-202ENST00000477856 ARID4BQ4LE39 1312 aaPredicted RBP6.61□□□□□ -1.35
CNTN3-202ENST00000477856 DNAJB2P25686 324 aa6.61□□□□□ -1.35
CNTN3-202ENST00000477856 ZC3H13Q5T200 1668 aaKnown RBP6.61□□□□□ -1.35
CNTN3-202ENST00000477856 CHGAP10645 457 aaKnown RBP6.6□□□□□ -1.35
CNTN3-202ENST00000477856 NKX1-1Q15270 411 aaPredicted RBP6.6□□□□□ -1.35
CNTN3-202ENST00000477856 PUS10Q3MIT2 529 aaKnown RBP6.6□□□□□ -1.35
CNTN3-202ENST00000477856 CDHR5Q9HBB8 845 aa6.6□□□□□ -1.35
CNTN3-202ENST00000477856 UNC13BO14795 1591 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms