RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 AXIN2Q9Y2T1 843 aa27.08■■□□□ 1.93
ACTB-210ENST00000477812 BCL9LQ86UU0 1499 aa27.07■■□□□ 1.92
ACTB-210ENST00000477812 CDK12Q9NYV4 1490 aaPredicted RBP27.07■■□□□ 1.92
ACTB-210ENST00000477812 RALBP1Q15311 655 aa27.07■■□□□ 1.92
ACTB-210ENST00000477812 IP6K1Q92551 441 aa27.07■■□□□ 1.92
ACTB-210ENST00000477812 FLT4P35916 1363 aa27.07■■□□□ 1.92
ACTB-210ENST00000477812 BLMP54132 1417 aaPredicted RBP27.07■■□□□ 1.92
ACTB-210ENST00000477812 PPP2R1AP30153 589 aa27.06■■□□□ 1.92
ACTB-210ENST00000477812 HOXC9P31274 260 aa27.06■■□□□ 1.92
ACTB-210ENST00000477812 COL5A2P05997 1499 aaPredicted RBP27.06■■□□□ 1.92
ACTB-210ENST00000477812 ZBTB7CA1YPR0 619 aa27.05■■□□□ 1.92
ACTB-210ENST00000477812 NGLY1Q96IV0 654 aa27.05■■□□□ 1.92
ACTB-210ENST00000477812 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.04■■□□□ 1.92
ACTB-210ENST00000477812 RGPD5Q99666 1765 aa27.04■■□□□ 1.92
ACTB-210ENST00000477812 BTG4Q9NY30 223 aa27.04■■□□□ 1.92
ACTB-210ENST00000477812 AFF2P51816 1311 aa27.04■■□□□ 1.92
ACTB-210ENST00000477812 AMPHP49418 695 aa27.03■■□□□ 1.92
ACTB-210ENST00000477812 INSRP06213 1382 aa27.02■■□□□ 1.92
ACTB-210ENST00000477812 MTHFSP49914 203 aa27.02■■□□□ 1.92
ACTB-210ENST00000477812 HSP90AB2PQ58FF8 381 aa27.01■■□□□ 1.91
ACTB-210ENST00000477812 COL3A1P02461 1466 aaPredicted RBP27■■□□□ 1.91
ACTB-210ENST00000477812 ERBB3P21860 1342 aa26.99■■□□□ 1.91
ACTB-210ENST00000477812 MYBBP1AQ9BQG0 1328 aaKnown RBP26.99■■□□□ 1.91
ACTB-210ENST00000477812 PPM1GO15355 546 aaPredicted RBP26.99■■□□□ 1.91
ACTB-210ENST00000477812 UNC5CLQ8IV45 518 aa26.98■■□□□ 1.91
ACTB-210ENST00000477812 RGS17Q9UGC6 210 aaPredicted RBP26.97■■□□□ 1.91
ACTB-210ENST00000477812 USP21Q9UK80 565 aa26.97■■□□□ 1.91
ACTB-210ENST00000477812 ANP32CO43423 234 aa26.95■■□□□ 1.9
ACTB-210ENST00000477812 DIEXFQ68CQ4 756 aaKnown RBP26.95■■□□□ 1.9
ACTB-210ENST00000477812 ANKRD24Q8TF21 1146 aa26.95■■□□□ 1.9
ACTB-210ENST00000477812 ATRNO75882 1429 aa26.95■■□□□ 1.9
ACTB-210ENST00000477812 WDR17Q8IZU2 1322 aa26.94■■□□□ 1.9
ACTB-210ENST00000477812 FAM208AQ9UK61 1670 aaKnown RBP26.94■■□□□ 1.9
ACTB-210ENST00000477812 LARP1Q6PKG0 1096 aaKnown RBP26.93■■□□□ 1.9
ACTB-210ENST00000477812 STRN4Q9NRL3 753 aa26.92■■□□□ 1.9
ACTB-210ENST00000477812 EIF4A2Q14240 407 aaKnown RBP26.91■■□□□ 1.9
ACTB-210ENST00000477812 VPS72Q15906 364 aa26.91■■□□□ 1.9
ACTB-210ENST00000477812 CRB1P82279 1406 aa26.9■■□□□ 1.9
ACTB-210ENST00000477812 ZNF772Q68DY9 489 aaPredicted RBP26.9■■□□□ 1.9
ACTB-210ENST00000477812 EVA1CP58658 441 aa26.89■■□□□ 1.9
ACTB-210ENST00000477812 LTV1Q96GA3 475 aaPredicted RBP26.89■■□□□ 1.9
ACTB-210ENST00000477812 RGPD1P0DJD0 1748 aa26.89■■□□□ 1.9
ACTB-210ENST00000477812 NCAPD2Q15021 1401 aa26.89■■□□□ 1.89
ACTB-210ENST00000477812 SPATA31A5Q5VU36 1347 aa26.89■■□□□ 1.89
ACTB-210ENST00000477812 SPATA31A7Q8IWB4 1347 aa26.89■■□□□ 1.89
ACTB-210ENST00000477812 IL13P35225 146 aa26.88■■□□□ 1.89
ACTB-210ENST00000477812 RGPD2P0DJD1 1756 aa26.88■■□□□ 1.89
ACTB-210ENST00000477812 GLI3P10071 1580 aa26.88■■□□□ 1.89
ACTB-210ENST00000477812 TRPC5Q9UL62 973 aaPredicted RBP26.87■■□□□ 1.89
ACTB-210ENST00000477812 PHF23Q9BUL5 403 aaPredicted RBP26.86■■□□□ 1.89
ACTB-210ENST00000477812 SPATA31A1Q5TZJ5 1347 aa26.86■■□□□ 1.89
ACTB-210ENST00000477812 CSB-PGBD3P0DP91 1061 aa26.85■■□□□ 1.89
ACTB-210ENST00000477812 CFAP53Q96M91 514 aa26.85■■□□□ 1.89
ACTB-210ENST00000477812 CARD10Q9BWT7 1032 aa26.85■■□□□ 1.89
ACTB-210ENST00000477812 NBPF6Q5VWK0 638 aa26.84■■□□□ 1.89
ACTB-210ENST00000477812 TOM1L2Q6ZVM7 507 aa26.84■■□□□ 1.89
ACTB-210ENST00000477812 NBPF4Q96M43 638 aa26.84■■□□□ 1.89
ACTB-210ENST00000477812 QTRT2Q9H974 415 aaKnown RBP26.84■■□□□ 1.89
ACTB-210ENST00000477812 DIAPH1O60610 1272 aaKnown RBP26.83■■□□□ 1.89
ACTB-210ENST00000477812 POTEAQ6S8J7 498 aa26.83■■□□□ 1.89
ACTB-210ENST00000477812 IGSF1Q8N6C5 1336 aa26.83■■□□□ 1.89
ACTB-210ENST00000477812 GJD4Q96KN9 370 aaPredicted RBP26.82■■□□□ 1.88
ACTB-210ENST00000477812 EYA1Q99502 592 aa26.82■■□□□ 1.88
ACTB-210ENST00000477812 NLRP2Q9NX02 1062 aa26.82■■□□□ 1.88
ACTB-210ENST00000477812 CCDC184Q52MB2 194 aa26.81■■□□□ 1.88
ACTB-210ENST00000477812 DISP2A7MBM2 1401 aa26.8■■□□□ 1.88
ACTB-210ENST00000477812 WNK3Q9BYP7 1800 aa26.79■■□□□ 1.88
ACTB-210ENST00000477812 TCP11L2Q8N4U5 519 aa26.78■■□□□ 1.88
ACTB-210ENST00000477812 CCDC9Q9Y3X0 531 aaKnown RBP26.78■■□□□ 1.88
ACTB-210ENST00000477812 KDRP35968 1356 aa26.78■■□□□ 1.88
ACTB-210ENST00000477812 THSD7AQ9UPZ6 1657 aa26.77■■□□□ 1.88
ACTB-210ENST00000477812 BARGINQ6ZT62 677 aa26.77■■□□□ 1.88
ACTB-210ENST00000477812 USHBP1Q8N6Y0 703 aa26.77■■□□□ 1.88
ACTB-210ENST00000477812 USP35Q9P2H5 1018 aa26.77■■□□□ 1.88
ACTB-210ENST00000477812 THRAP3Q9Y2W1 955 aaKnown RBP26.77■■□□□ 1.88
ACTB-210ENST00000477812 RBM6P78332 1123 aaKnown RBP26.75■■□□□ 1.87
ACTB-210ENST00000477812 MEGF6O75095 1541 aa26.75■■□□□ 1.87
ACTB-210ENST00000477812 ONECUT3O60422 494 aaPredicted RBP26.74■■□□□ 1.87
ACTB-210ENST00000477812 AEBP1Q8IUX7 1158 aa26.73■■□□□ 1.87
ACTB-210ENST00000477812 MIER1Q8N108 512 aa26.73■■□□□ 1.87
ACTB-210ENST00000477812 FAM98CQ17RN3 349 aaKnown RBP26.71■■□□□ 1.87
ACTB-210ENST00000477812 NUDCQ9Y266 331 aa26.71■■□□□ 1.87
ACTB-210ENST00000477812 U2SURPO15042 1029 aaKnown RBP26.7■■□□□ 1.86
ACTB-210ENST00000477812 RXRBP28702 533 aa26.7■■□□□ 1.86
ACTB-210ENST00000477812 SULT6B1Q6IMI4 303 aa26.7■■□□□ 1.86
ACTB-210ENST00000477812 PARP4Q9UKK3 1724 aaKnown RBP26.7■■□□□ 1.86
ACTB-210ENST00000477812 LRRC37A3O60309 1634 aa26.69■■□□□ 1.86
ACTB-210ENST00000477812 OVOS2A0A0G2JMS6 1433 aa26.69■■□□□ 1.86
ACTB-210ENST00000477812 MRS2Q9HD23 443 aa26.69■■□□□ 1.86
ACTB-210ENST00000477812 RGS12O14924 1447 aa26.68■■□□□ 1.86
ACTB-210ENST00000477812 CCER2I3L3R5 266 aa26.68■■□□□ 1.86
ACTB-210ENST00000477812 IL2RBP14784 551 aa26.68■■□□□ 1.86
ACTB-210ENST00000477812 CDCA7Q9BWT1 371 aaPredicted RBP26.68■■□□□ 1.86
ACTB-210ENST00000477812 PLEKHG2Q9H7P9 1386 aa26.68■■□□□ 1.86
ACTB-210ENST00000477812 HMOX1P09601 288 aa26.67■■□□□ 1.86
ACTB-210ENST00000477812 U2AF1L5P0DN76 240 aaPredicted RBP26.66■■□□□ 1.86
ACTB-210ENST00000477812 U2AF1Q01081 240 aaKnown RBP eCLIP26.66■■□□□ 1.863e-42■□□□□ 8.5
ACTB-210ENST00000477812 RSPH6AQ9H0K4 717 aa26.66■■□□□ 1.86
ACTB-210ENST00000477812 PNISRQ8TF01 805 aaKnown RBP26.65■■□□□ 1.86
ACTB-210ENST00000477812 PKD1L3Q7Z443 1732 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms