RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 WDR63Q8IWG1 891 aa16.11■□□□□ 0.17
PRPF39-203ENST00000477626 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
PRPF39-203ENST00000477626 SENP3-EIF4A1A0A087X0R7 540 aa16.11■□□□□ 0.17
PRPF39-203ENST00000477626 DIAPH1O60610 1272 aaKnown RBP16.11■□□□□ 0.17
PRPF39-203ENST00000477626 RRS1Q15050 365 aaKnown RBP16.11■□□□□ 0.17
PRPF39-203ENST00000477626 COL16A1Q07092 1604 aaPredicted RBP16.1■□□□□ 0.17
PRPF39-203ENST00000477626 GLI3P10071 1580 aa16.1■□□□□ 0.17
PRPF39-203ENST00000477626 ORAI2Q96SN7 254 aa16.1■□□□□ 0.17
PRPF39-203ENST00000477626 IL16Q14005 1332 aa16.09■□□□□ 0.17
PRPF39-203ENST00000477626 CFAP53Q96M91 514 aa16.09■□□□□ 0.17
PRPF39-203ENST00000477626 ROBO1Q9Y6N7 1651 aa16.09■□□□□ 0.17
PRPF39-203ENST00000477626 PHACTR3Q96KR7 559 aa16.08■□□□□ 0.17
PRPF39-203ENST00000477626 SCN11AQ9UI33 1791 aa16.08■□□□□ 0.17
PRPF39-203ENST00000477626 PLCH1Q4KWH8 1693 aa16.08■□□□□ 0.16
PRPF39-203ENST00000477626 NUTM2FA1L443 756 aa16.08■□□□□ 0.16
PRPF39-203ENST00000477626 TMPOP42166 694 aaKnown RBP16.08■□□□□ 0.16
PRPF39-203ENST00000477626 CRB1P82279 1406 aa16.07■□□□□ 0.16
PRPF39-203ENST00000477626 ZNF853P0CG23 659 aa16.07■□□□□ 0.16
PRPF39-203ENST00000477626 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
PRPF39-203ENST00000477626 TNS3Q68CZ2 1445 aa16.07■□□□□ 0.16
PRPF39-203ENST00000477626 RRP1P56182 461 aaKnown RBP16.06■□□□□ 0.16
PRPF39-203ENST00000477626 MSH6P52701 1360 aa16.06■□□□□ 0.16
PRPF39-203ENST00000477626 E9PSI1 815 aa16.05■□□□□ 0.16
PRPF39-203ENST00000477626 PAPPAQ13219 1627 aa16.05■□□□□ 0.16
PRPF39-203ENST00000477626 FKBP8Q14318 412 aa16.05■□□□□ 0.16
PRPF39-203ENST00000477626 HSP90AB2PQ58FF8 381 aa16.05■□□□□ 0.16
PRPF39-203ENST00000477626 ZNF335Q9H4Z2 1342 aaPredicted RBP16.05■□□□□ 0.16
PRPF39-203ENST00000477626 NRAPQ86VF7 1730 aa16.04■□□□□ 0.16
PRPF39-203ENST00000477626 PLEKHG2Q9H7P9 1386 aa16.04■□□□□ 0.16
PRPF39-203ENST00000477626 HOXC9P31274 260 aa16.04■□□□□ 0.16
PRPF39-203ENST00000477626 RCAN3Q9UKA8 241 aa16.04■□□□□ 0.16
PRPF39-203ENST00000477626 U2AF1L5P0DN76 240 aaPredicted RBP16.02■□□□□ 0.16
PRPF39-203ENST00000477626 U2AF1Q01081 240 aaKnown RBP eCLIP16.02■□□□□ 0.166e-6■■■□□ 14.7
PRPF39-203ENST00000477626 PROSER2Q86WR7 435 aaPredicted RBP16.02■□□□□ 0.16
PRPF39-203ENST00000477626 CPDO75976 1380 aa16.02■□□□□ 0.15
PRPF39-203ENST00000477626 SOS2Q07890 1332 aaPredicted RBP16.01■□□□□ 0.15
PRPF39-203ENST00000477626 CACNA1FO60840 1977 aa16.01■□□□□ 0.15
PRPF39-203ENST00000477626 AEBP1Q8IUX7 1158 aa16.01■□□□□ 0.15
PRPF39-203ENST00000477626 NGDNQ8NEJ9 315 aaKnown RBP16.01■□□□□ 0.15
PRPF39-203ENST00000477626 UBR2Q8IWV8 1755 aa16■□□□□ 0.15
PRPF39-203ENST00000477626 ARHGEF25Q86VW2 580 aa16■□□□□ 0.15
PRPF39-203ENST00000477626 MRC1P22897 1456 aa16■□□□□ 0.15
PRPF39-203ENST00000477626 PRKAR2BP31323 418 aa15.99■□□□□ 0.15
PRPF39-203ENST00000477626 NFE2L2Q16236 605 aa15.99■□□□□ 0.15
PRPF39-203ENST00000477626 FANCIQ9NVI1 1328 aa15.99■□□□□ 0.15
PRPF39-203ENST00000477626 OVOS2A0A0G2JMS6 1433 aa15.98■□□□□ 0.15
PRPF39-203ENST00000477626 ESCO1Q5FWF5 840 aa15.98■□□□□ 0.15
PRPF39-203ENST00000477626 BRINP3Q76B58 766 aa15.98■□□□□ 0.15
PRPF39-203ENST00000477626 RRP7AQ9Y3A4 280 aaKnown RBP15.98■□□□□ 0.15
PRPF39-203ENST00000477626 IP6K1Q92551 441 aa15.98■□□□□ 0.15
PRPF39-203ENST00000477626 BRPF1P55201 1214 aaPredicted RBP15.97■□□□□ 0.15
PRPF39-203ENST00000477626 EYA1Q99502 592 aa15.97■□□□□ 0.15
PRPF39-203ENST00000477626 SPATA31A3Q5VYP0 1347 aa15.97■□□□□ 0.15
PRPF39-203ENST00000477626 TOGARAM1Q9Y4F4 1720 aa15.97■□□□□ 0.15
PRPF39-203ENST00000477626 SALL2Q9Y467 1007 aaPredicted RBP15.97■□□□□ 0.15
PRPF39-203ENST00000477626 CEMIPQ8WUJ3 1361 aa15.96■□□□□ 0.15
PRPF39-203ENST00000477626 C5P01031 1676 aa15.96■□□□□ 0.14
PRPF39-203ENST00000477626 C20orf194Q5TEA3 1177 aa15.95■□□□□ 0.14
PRPF39-203ENST00000477626 CADPS2Q86UW7 1296 aa15.95■□□□□ 0.14
PRPF39-203ENST00000477626 ABTB2Q8N961 1025 aa15.95■□□□□ 0.14
PRPF39-203ENST00000477626 RGS12O14924 1447 aa15.95■□□□□ 0.14
PRPF39-203ENST00000477626 COL14A1Q05707 1796 aaKnown RBP15.94■□□□□ 0.14
PRPF39-203ENST00000477626 RARSP54136 660 aaKnown RBP15.94■□□□□ 0.14
PRPF39-203ENST00000477626 NLRP6P59044 892 aa15.94■□□□□ 0.14
PRPF39-203ENST00000477626 FOXO3O43524 673 aa15.93■□□□□ 0.14
PRPF39-203ENST00000477626 HMOX1P09601 288 aa15.93■□□□□ 0.14
PRPF39-203ENST00000477626 CT47B1P0C2W7 299 aaPredicted RBP15.93■□□□□ 0.14
PRPF39-203ENST00000477626 KRT28Q7Z3Y7 464 aa15.93■□□□□ 0.14
PRPF39-203ENST00000477626 AXIN2Q9Y2T1 843 aa15.93■□□□□ 0.14
PRPF39-203ENST00000477626 PNNQ9H307 717 aaKnown RBP15.92■□□□□ 0.14
PRPF39-203ENST00000477626 U2SURPO15042 1029 aaKnown RBP15.92■□□□□ 0.14
PRPF39-203ENST00000477626 GCP02774 474 aa15.92■□□□□ 0.14
PRPF39-203ENST00000477626 IRX6P78412 446 aaPredicted RBP15.92■□□□□ 0.14
PRPF39-203ENST00000477626 PPP4R2Q9NY27 417 aa15.92■□□□□ 0.14
PRPF39-203ENST00000477626 PHLPP1O60346 1717 aa15.92■□□□□ 0.14
PRPF39-203ENST00000477626 RIPK4P57078 832 aa15.91■□□□□ 0.14
PRPF39-203ENST00000477626 KCNH5Q8NCM2 988 aa15.91■□□□□ 0.14
PRPF39-203ENST00000477626 KDM2BQ8NHM5 1336 aa15.91■□□□□ 0.14
PRPF39-203ENST00000477626 DDX17Q92841 729 aaKnown RBP15.91■□□□□ 0.14
PRPF39-203ENST00000477626 LAMB4A4D0S4 1761 aa15.91■□□□□ 0.14
PRPF39-203ENST00000477626 BCAR3O75815 825 aa15.9■□□□□ 0.14
PRPF39-203ENST00000477626 IFT57Q9NWB7 429 aa15.9■□□□□ 0.14
PRPF39-203ENST00000477626 NWD2Q9ULI1 1742 aa15.9■□□□□ 0.14
PRPF39-203ENST00000477626 SULT6B1Q6IMI4 303 aa15.89■□□□□ 0.13
PRPF39-203ENST00000477626 COL5A2P05997 1499 aaPredicted RBP15.89■□□□□ 0.13
PRPF39-203ENST00000477626 MEGF6O75095 1541 aa15.89■□□□□ 0.13
PRPF39-203ENST00000477626 NPHP3Q7Z494 1330 aa15.89■□□□□ 0.13
PRPF39-203ENST00000477626 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.89■□□□□ 0.13
PRPF39-203ENST00000477626 PSME1Q06323 249 aa15.89■□□□□ 0.13
PRPF39-203ENST00000477626 MTHFSDQ2M296 383 aaKnown RBP15.88■□□□□ 0.13
PRPF39-203ENST00000477626 NBPF6Q5VWK0 638 aa15.88■□□□□ 0.13
PRPF39-203ENST00000477626 NUTM2GQ5VZR2 741 aa15.88■□□□□ 0.13
PRPF39-203ENST00000477626 NBPF4Q96M43 638 aa15.88■□□□□ 0.13
PRPF39-203ENST00000477626 KIAA0232Q92628 1395 aa15.88■□□□□ 0.13
PRPF39-203ENST00000477626 CICQ96RK0 1608 aaPredicted RBP15.87■□□□□ 0.13
PRPF39-203ENST00000477626 CHL1O00533 1208 aa15.87■□□□□ 0.13
PRPF39-203ENST00000477626 PLIN1O60240 522 aa15.87■□□□□ 0.13
PRPF39-203ENST00000477626 ERBB3P21860 1342 aa15.87■□□□□ 0.13
PRPF39-203ENST00000477626 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
PRPF39-203ENST00000477626 EXOC6Q8TAG9 804 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms