RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PDE3BQ13370 1112 aa15.73■□□□□ 0.11
RTFDC1-207ENST00000477573 WWC1Q8IX03 1113 aa15.73■□□□□ 0.11
RTFDC1-207ENST00000477573 MINK1Q8N4C8 1332 aaPredicted RBP15.73■□□□□ 0.11
RTFDC1-207ENST00000477573 FER1L4A9Z1Z3 1794 aa15.73■□□□□ 0.11
RTFDC1-207ENST00000477573 NSD2O96028 1365 aa15.73■□□□□ 0.11
RTFDC1-207ENST00000477573 MORC1Q86VD1 984 aa15.72■□□□□ 0.11
RTFDC1-207ENST00000477573 NRXN3Q9Y4C0 1643 aa15.72■□□□□ 0.11
RTFDC1-207ENST00000477573 FAM193AP78312 1265 aa15.72■□□□□ 0.11
RTFDC1-207ENST00000477573 SLKQ9H2G2 1235 aaPredicted RBP15.72■□□□□ 0.11
RTFDC1-207ENST00000477573 NOL7Q9UMY1 257 aaKnown RBP15.72■□□□□ 0.11
RTFDC1-207ENST00000477573 C3P01024 1663 aa15.71■□□□□ 0.11
RTFDC1-207ENST00000477573 CCDC66A2RUB6 948 aa15.71■□□□□ 0.11
RTFDC1-207ENST00000477573 ZBTB22O15209 634 aa15.71■□□□□ 0.11
RTFDC1-207ENST00000477573 APPP05067 770 aa15.71■□□□□ 0.11
RTFDC1-207ENST00000477573 TERF2IPQ9NYB0 399 aa15.71■□□□□ 0.11
RTFDC1-207ENST00000477573 GRIPAP1Q4V328 841 aa15.7■□□□□ 0.1
RTFDC1-207ENST00000477573 ARID3AQ99856 593 aa15.7■□□□□ 0.1
RTFDC1-207ENST00000477573 E9PSI1 815 aa15.7■□□□□ 0.1
RTFDC1-207ENST00000477573 CBX1P83916 185 aa15.7■□□□□ 0.1
RTFDC1-207ENST00000477573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.7■□□□□ 0.1
RTFDC1-207ENST00000477573 SIRT1Q96EB6 747 aa15.7■□□□□ 0.1
RTFDC1-207ENST00000477573 ADAMTS8Q9UP79 889 aa15.7■□□□□ 0.1
RTFDC1-207ENST00000477573 EID1Q9Y6B2 187 aa15.69■□□□□ 0.1
RTFDC1-207ENST00000477573 CDK19Q9BWU1 502 aa15.69■□□□□ 0.1
RTFDC1-207ENST00000477573 CEBPAP49715 358 aaPredicted RBP15.68■□□□□ 0.1
RTFDC1-207ENST00000477573 FAM135BQ49AJ0 1406 aa15.68■□□□□ 0.1
RTFDC1-207ENST00000477573 PLEKHG1Q9ULL1 1385 aa15.68■□□□□ 0.1
RTFDC1-207ENST00000477573 KNDC1Q76NI1 1749 aa15.68■□□□□ 0.1
RTFDC1-207ENST00000477573 USP19O94966 1318 aa15.68■□□□□ 0.1
RTFDC1-207ENST00000477573 POLR3AO14802 1390 aaPredicted RBP15.67■□□□□ 0.1
RTFDC1-207ENST00000477573 METP08581 1390 aa15.67■□□□□ 0.1
RTFDC1-207ENST00000477573 SOX12O15370 315 aa15.67■□□□□ 0.1
RTFDC1-207ENST00000477573 HDGFL2Q7Z4V5 671 aaPredicted RBP15.67■□□□□ 0.1
RTFDC1-207ENST00000477573 TECPR2O15040 1411 aa15.67■□□□□ 0.1
RTFDC1-207ENST00000477573 KCNJ4P48050 445 aa15.66■□□□□ 0.1
RTFDC1-207ENST00000477573 MYRIPQ8NFW9 859 aa15.66■□□□□ 0.1
RTFDC1-207ENST00000477573 A0A1W2PP64 1363 aa15.66■□□□□ 0.1
RTFDC1-207ENST00000477573 SKOR2Q2VWA4 1001 aaPredicted RBP15.66■□□□□ 0.1
RTFDC1-207ENST00000477573 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
RTFDC1-207ENST00000477573 WAPLQ7Z5K2 1190 aa15.66■□□□□ 0.1
RTFDC1-207ENST00000477573 THEMISQ8N1K5 641 aaPredicted RBP15.66■□□□□ 0.1
RTFDC1-207ENST00000477573 GTF2F1P35269 517 aaKnown RBP eCLIP15.65■□□□□ 0.1
RTFDC1-207ENST00000477573 GABPB1Q06547 395 aaPredicted RBP15.65■□□□□ 0.1
RTFDC1-207ENST00000477573 TXNDC2Q86VQ3 553 aa15.65■□□□□ 0.1
RTFDC1-207ENST00000477573 CHMP5Q9NZZ3 219 aa15.65■□□□□ 0.1
RTFDC1-207ENST00000477573 IBTKQ9P2D0 1353 aaPredicted RBP15.65■□□□□ 0.1
RTFDC1-207ENST00000477573 TULP2O00295 520 aa15.65■□□□□ 0.1
RTFDC1-207ENST00000477573 TIGD1Q96MW7 591 aa15.65■□□□□ 0.1
RTFDC1-207ENST00000477573 SENP3-EIF4A1A0A087X0R7 540 aa15.64■□□□□ 0.09
RTFDC1-207ENST00000477573 ZNF771Q7L3S4 317 aaPredicted RBP15.64■□□□□ 0.09
RTFDC1-207ENST00000477573 CFAP53Q96M91 514 aa15.64■□□□□ 0.09
RTFDC1-207ENST00000477573 EFCC1Q9HA90 598 aa15.64■□□□□ 0.09
RTFDC1-207ENST00000477573 KIF3AQ9Y496 699 aa15.64■□□□□ 0.09
RTFDC1-207ENST00000477573 SLIT1O75093 1534 aa15.64■□□□□ 0.09
RTFDC1-207ENST00000477573 CPS1P31327 1500 aa15.64■□□□□ 0.09
RTFDC1-207ENST00000477573 MAPK8IP2Q13387 824 aaPredicted RBP15.63■□□□□ 0.09
RTFDC1-207ENST00000477573 NASPP49321 788 aaPredicted RBP15.63■□□□□ 0.09
RTFDC1-207ENST00000477573 NGEFQ8N5V2 710 aa15.63■□□□□ 0.09
RTFDC1-207ENST00000477573 PRIMPOLQ96LW4 560 aa15.63■□□□□ 0.09
RTFDC1-207ENST00000477573 PLEKHH1Q9ULM0 1364 aa15.63■□□□□ 0.09
RTFDC1-207ENST00000477573 MYCNP04198 464 aaPredicted RBP15.62■□□□□ 0.09
RTFDC1-207ENST00000477573 HMGN5P82970 282 aaKnown RBP15.62■□□□□ 0.09
RTFDC1-207ENST00000477573 ARHGAP23Q9P227 1491 aa15.62■□□□□ 0.09
RTFDC1-207ENST00000477573 ADAMTS13Q76LX8 1427 aa15.62■□□□□ 0.09
RTFDC1-207ENST00000477573 ATP7BP35670 1465 aa15.62■□□□□ 0.09
RTFDC1-207ENST00000477573 WASLO00401 505 aaPredicted RBP15.62■□□□□ 0.09
RTFDC1-207ENST00000477573 PHF14O94880 888 aa15.62■□□□□ 0.09
RTFDC1-207ENST00000477573 LTKP29376 864 aa15.62■□□□□ 0.09
RTFDC1-207ENST00000477573 RBM25P49756 843 aaKnown RBP15.62■□□□□ 0.09
RTFDC1-207ENST00000477573 ATP2B3Q16720 1220 aa15.62■□□□□ 0.09
RTFDC1-207ENST00000477573 MED14O60244 1454 aa15.61■□□□□ 0.09
RTFDC1-207ENST00000477573 CABP1Q9NZU7 370 aa15.61■□□□□ 0.09
RTFDC1-207ENST00000477573 FEZ1Q99689 392 aa15.6■□□□□ 0.09
RTFDC1-207ENST00000477573 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
RTFDC1-207ENST00000477573 ZKSCAN5Q9Y2L8 839 aa15.6■□□□□ 0.09
RTFDC1-207ENST00000477573 GAS2L3Q86XJ1 694 aa15.6■□□□□ 0.09
RTFDC1-207ENST00000477573 CEP120Q8N960 986 aa15.6■□□□□ 0.09
RTFDC1-207ENST00000477573 CD163L1Q9NR16 1453 aa15.6■□□□□ 0.09
RTFDC1-207ENST00000477573 SKAP1Q86WV1 359 aa15.59■□□□□ 0.09
RTFDC1-207ENST00000477573 XPCQ01831 940 aaPredicted RBP15.59■□□□□ 0.09
RTFDC1-207ENST00000477573 AEBP1Q8IUX7 1158 aa15.59■□□□□ 0.09
RTFDC1-207ENST00000477573 ANKRD26Q9UPS8 1709 aa15.59■□□□□ 0.09
RTFDC1-207ENST00000477573 MCCP23508 829 aa15.58■□□□□ 0.08
RTFDC1-207ENST00000477573 MTHFSP49914 203 aa15.58■□□□□ 0.08
RTFDC1-207ENST00000477573 CERS3Q8IU89 383 aa15.58■□□□□ 0.08
RTFDC1-207ENST00000477573 ZNF710Q8N1W2 664 aa15.58■□□□□ 0.08
RTFDC1-207ENST00000477573 CALCOCO1Q9P1Z2 691 aa15.58■□□□□ 0.08
RTFDC1-207ENST00000477573 TBX22Q9Y458 520 aa15.58■□□□□ 0.08
RTFDC1-207ENST00000477573 DIP2AQ14689 1571 aa15.57■□□□□ 0.08
RTFDC1-207ENST00000477573 PDLIM2Q96JY6 352 aa15.57■□□□□ 0.08
RTFDC1-207ENST00000477573 CRBNQ96SW2 442 aa15.57■□□□□ 0.08
RTFDC1-207ENST00000477573 FYB1O15117 783 aa15.56■□□□□ 0.08
RTFDC1-207ENST00000477573 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.56■□□□□ 0.08
RTFDC1-207ENST00000477573 PATL2C9JE40 543 aaKnown RBP15.56■□□□□ 0.08
RTFDC1-207ENST00000477573 CARD10Q9BWT7 1032 aa15.56■□□□□ 0.08
RTFDC1-207ENST00000477573 GGNBP2Q9H3C7 697 aa15.56■□□□□ 0.08
RTFDC1-207ENST00000477573 CCDC61Q9Y6R9 512 aa15.56■□□□□ 0.08
RTFDC1-207ENST00000477573 PPIP5K1Q6PFW1 1433 aa15.56■□□□□ 0.08
RTFDC1-207ENST00000477573 RIMS1Q86UR5 1692 aaKnown RBP15.56■□□□□ 0.08
RTFDC1-207ENST00000477573 NUDT16Q96DE0 195 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms