RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
PABPC4-212ENST00000477556 CSB-PGBD3P0DP91 1061 aa18.67■□□□□ 0.58
PABPC4-212ENST00000477556 CDCA7Q9BWT1 371 aaPredicted RBP18.67■□□□□ 0.58
PABPC4-212ENST00000477556 CARD11Q9BXL7 1154 aa18.67■□□□□ 0.58
PABPC4-212ENST00000477556 AXIN2Q9Y2T1 843 aa18.67■□□□□ 0.58
PABPC4-212ENST00000477556 COL18A1P39060 1754 aa18.67■□□□□ 0.58
PABPC4-212ENST00000477556 SBNO2Q9Y2G9 1366 aa18.67■□□□□ 0.58
PABPC4-212ENST00000477556 RREB1Q92766 1687 aa18.66■□□□□ 0.58
PABPC4-212ENST00000477556 LRRC37A3O60309 1634 aa18.64■□□□□ 0.57
PABPC4-212ENST00000477556 CARD10Q9BWT7 1032 aa18.64■□□□□ 0.57
PABPC4-212ENST00000477556 NUP188Q5SRE5 1749 aa18.63■□□□□ 0.57
PABPC4-212ENST00000477556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.62■□□□□ 0.57
PABPC4-212ENST00000477556 TMC1Q8TDI8 760 aa18.62■□□□□ 0.57
PABPC4-212ENST00000477556 TONSLQ96HA7 1378 aa18.62■□□□□ 0.57
PABPC4-212ENST00000477556 PEAK1Q9H792 1746 aa18.62■□□□□ 0.57
PABPC4-212ENST00000477556 NFAT5O94916 1531 aa18.61■□□□□ 0.57
PABPC4-212ENST00000477556 PLSCR1O15162 318 aa18.61■□□□□ 0.57
PABPC4-212ENST00000477556 HDGFL2Q7Z4V5 671 aaPredicted RBP18.61■□□□□ 0.57
PABPC4-212ENST00000477556 MON2Q7Z3U7 1717 aa18.6■□□□□ 0.57
PABPC4-212ENST00000477556 USP31Q70CQ4 1352 aa18.6■□□□□ 0.57
PABPC4-212ENST00000477556 CCDC7Q96M83 1385 aa18.6■□□□□ 0.57
PABPC4-212ENST00000477556 BCL11BQ9C0K0 894 aaPredicted RBP18.6■□□□□ 0.57
PABPC4-212ENST00000477556 ABCC6O95255 1503 aa18.59■□□□□ 0.57
PABPC4-212ENST00000477556 WNK3Q9BYP7 1800 aa18.59■□□□□ 0.57
PABPC4-212ENST00000477556 EXOC5O00471 708 aa18.59■□□□□ 0.57
PABPC4-212ENST00000477556 MARCH10Q8NA82 808 aaPredicted RBP18.59■□□□□ 0.57
PABPC4-212ENST00000477556 BCL9O00512 1426 aa18.58■□□□□ 0.57
PABPC4-212ENST00000477556 RGPD5Q99666 1765 aa18.58■□□□□ 0.57
PABPC4-212ENST00000477556 NME9Q86XW9 330 aa18.57■□□□□ 0.56
PABPC4-212ENST00000477556 SLC12A5Q9H2X9 1139 aa18.57■□□□□ 0.56
PABPC4-212ENST00000477556 TERF2IPQ9NYB0 399 aa18.57■□□□□ 0.56
PABPC4-212ENST00000477556 SBF2Q86WG5 1849 aa18.57■□□□□ 0.56
PABPC4-212ENST00000477556 RGPD3A6NKT7 1758 aaPredicted RBP18.57■□□□□ 0.56
PABPC4-212ENST00000477556 RGPD4Q7Z3J3 1758 aa18.57■□□□□ 0.56
PABPC4-212ENST00000477556 PUS7Q96PZ0 661 aaKnown RBP18.56■□□□□ 0.56
PABPC4-212ENST00000477556 SPON1Q9HCB6 807 aa18.56■□□□□ 0.56
PABPC4-212ENST00000477556 CD163L1Q9NR16 1453 aa18.56■□□□□ 0.56
PABPC4-212ENST00000477556 PTF1AQ7RTS3 328 aa18.55■□□□□ 0.56
PABPC4-212ENST00000477556 EDC4Q6P2E9 1401 aaKnown RBP18.55■□□□□ 0.56
PABPC4-212ENST00000477556 ERBB3P21860 1342 aa18.54■□□□□ 0.56
PABPC4-212ENST00000477556 KCNQ2O43526 872 aa18.54■□□□□ 0.56
PABPC4-212ENST00000477556 NLRP2Q9NX02 1062 aa18.54■□□□□ 0.56
PABPC4-212ENST00000477556 PPP1R1BQ9UD71 204 aaPredicted RBP18.54■□□□□ 0.56
PABPC4-212ENST00000477556 TNS2Q63HR2 1409 aa18.54■□□□□ 0.56
PABPC4-212ENST00000477556 USP54Q70EL1 1684 aa18.54■□□□□ 0.56
PABPC4-212ENST00000477556 A0A1W2PP64 1363 aa18.52■□□□□ 0.55
PABPC4-212ENST00000477556 SLC24A1O60721 1099 aa18.51■□□□□ 0.55
PABPC4-212ENST00000477556 ANO8Q9HCE9 1232 aaPredicted RBP18.51■□□□□ 0.55
PABPC4-212ENST00000477556 IL2RBP14784 551 aa18.5■□□□□ 0.55
PABPC4-212ENST00000477556 PROM2Q8N271 834 aa18.5■□□□□ 0.55
PABPC4-212ENST00000477556 ANKRD24Q8TF21 1146 aa18.5■□□□□ 0.55
PABPC4-212ENST00000477556 NINLQ9Y2I6 1382 aa18.5■□□□□ 0.55
PABPC4-212ENST00000477556 TXNRD1Q16881 649 aa18.49■□□□□ 0.55
PABPC4-212ENST00000477556 LTN1O94822 1766 aa18.49■□□□□ 0.55
PABPC4-212ENST00000477556 STK32BQ9NY57 414 aa18.48■□□□□ 0.55
PABPC4-212ENST00000477556 ST20-MTHFSA0A0A6YYL1 179 aa18.47■□□□□ 0.55
PABPC4-212ENST00000477556 TESK2Q96S53 571 aa18.47■□□□□ 0.55
PABPC4-212ENST00000477556 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
PABPC4-212ENST00000477556 IP6K1Q92551 441 aa18.46■□□□□ 0.55
PABPC4-212ENST00000477556 ACSBG1Q96GR2 724 aa18.46■□□□□ 0.55
PABPC4-212ENST00000477556 COG3Q96JB2 828 aa18.45■□□□□ 0.54
PABPC4-212ENST00000477556 SLC15A2Q16348 729 aa18.44■□□□□ 0.54
PABPC4-212ENST00000477556 NHSQ6T4R5 1651 aa18.44■□□□□ 0.54
PABPC4-212ENST00000477556 CASZ1Q86V15 1759 aa18.43■□□□□ 0.54
PABPC4-212ENST00000477556 LTV1Q96GA3 475 aaPredicted RBP18.43■□□□□ 0.54
PABPC4-212ENST00000477556 ZBTB7AO95365 584 aa18.42■□□□□ 0.54
PABPC4-212ENST00000477556 PDGFDQ9GZP0 370 aaPredicted RBP18.42■□□□□ 0.54
PABPC4-212ENST00000477556 AMPHP49418 695 aa18.41■□□□□ 0.54
PABPC4-212ENST00000477556 ANKRD36BQ8N2N9 1353 aa18.41■□□□□ 0.54
PABPC4-212ENST00000477556 TMF1P82094 1093 aa18.4■□□□□ 0.54
PABPC4-212ENST00000477556 TRIM26Q12899 539 aaPredicted RBP18.4■□□□□ 0.54
PABPC4-212ENST00000477556 MAP3K19Q56UN5 1328 aa18.4■□□□□ 0.54
PABPC4-212ENST00000477556 FAM208AQ9UK61 1670 aaKnown RBP18.39■□□□□ 0.53
PABPC4-212ENST00000477556 HOXC9P31274 260 aa18.39■□□□□ 0.53
PABPC4-212ENST00000477556 DDX54Q8TDD1 881 aaKnown RBP18.39■□□□□ 0.53
PABPC4-212ENST00000477556 ATF5Q9Y2D1 282 aaPredicted RBP18.39■□□□□ 0.53
PABPC4-212ENST00000477556 KAT6BQ8WYB5 2073 aa18.38■□□□□ 0.53
PABPC4-212ENST00000477556 YY1P25490 414 aa18.38■□□□□ 0.53
PABPC4-212ENST00000477556 PTGER2P43116 358 aa18.37■□□□□ 0.53
PABPC4-212ENST00000477556 MTFR1LQ9H019 292 aa18.37■□□□□ 0.53
PABPC4-212ENST00000477556 USP47Q96K76 1375 aa18.37■□□□□ 0.53
PABPC4-212ENST00000477556 BTAF1O14981 1849 aa18.36■□□□□ 0.53
PABPC4-212ENST00000477556 RTL1A6NKG5 1358 aa18.35■□□□□ 0.53
PABPC4-212ENST00000477556 FBLN1P23142 703 aa18.35■□□□□ 0.53
PABPC4-212ENST00000477556 CDCA8Q53HL2 280 aa18.35■□□□□ 0.53
PABPC4-212ENST00000477556 FYB1O15117 783 aa18.33■□□□□ 0.52
PABPC4-212ENST00000477556 SLC27A3Q5K4L6 730 aa18.33■□□□□ 0.52
PABPC4-212ENST00000477556 ZCRB1Q8TBF4 217 aaKnown RBP18.33■□□□□ 0.52
PABPC4-212ENST00000477556 SYTL4Q96C24 671 aaPredicted RBP18.33■□□□□ 0.52
PABPC4-212ENST00000477556 GGNBP2Q9H3C7 697 aa18.33■□□□□ 0.52
PABPC4-212ENST00000477556 MYOM1P52179 1685 aa18.33■□□□□ 0.52
PABPC4-212ENST00000477556 PAPPAQ13219 1627 aa18.32■□□□□ 0.52
PABPC4-212ENST00000477556 RRS1Q15050 365 aaKnown RBP18.32■□□□□ 0.52
PABPC4-212ENST00000477556 LRRC4BQ9NT99 713 aa18.32■□□□□ 0.52
PABPC4-212ENST00000477556 ZNF827Q17R98 1081 aa18.31■□□□□ 0.52
PABPC4-212ENST00000477556 SMG6Q86US8 1419 aaKnown RBP18.31■□□□□ 0.52
PABPC4-212ENST00000477556 PRIM1P49642 420 aaKnown RBP18.3■□□□□ 0.52
PABPC4-212ENST00000477556 SGIP1Q9BQI5 828 aa18.3■□□□□ 0.52
PABPC4-212ENST00000477556 FHDC1Q9C0D6 1143 aaPredicted RBP18.3■□□□□ 0.52
PABPC4-212ENST00000477556 RAPGEF4Q8WZA2 1011 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms