RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 OVOS2Q6IE36 1432 aa16.19■□□□□ 0.18
HDLBP-236ENST00000477477 C11orf95C9JLR9 678 aaPredicted RBP16.18■□□□□ 0.18
HDLBP-236ENST00000477477 LRRC37A3O60309 1634 aa16.18■□□□□ 0.18
HDLBP-236ENST00000477477 NFAT5O94916 1531 aa16.18■□□□□ 0.18
HDLBP-236ENST00000477477 TONSLQ96HA7 1378 aa16.17■□□□□ 0.18
HDLBP-236ENST00000477477 SOX12O15370 315 aa16.17■□□□□ 0.18
HDLBP-236ENST00000477477 RREB1Q92766 1687 aa16.17■□□□□ 0.18
HDLBP-236ENST00000477477 DDB1Q16531 1140 aa16.16■□□□□ 0.18
HDLBP-236ENST00000477477 MON2Q7Z3U7 1717 aa16.16■□□□□ 0.18
HDLBP-236ENST00000477477 PEAK1Q9H792 1746 aa16.16■□□□□ 0.18
HDLBP-236ENST00000477477 CD163L1Q9NR16 1453 aa16.16■□□□□ 0.18
HDLBP-236ENST00000477477 ABCC6O95255 1503 aa16.14■□□□□ 0.18
HDLBP-236ENST00000477477 USP31Q70CQ4 1352 aa16.14■□□□□ 0.17
HDLBP-236ENST00000477477 CSB-PGBD3P0DP91 1061 aa16.14■□□□□ 0.17
HDLBP-236ENST00000477477 CDCA7Q9BWT1 371 aaPredicted RBP16.14■□□□□ 0.17
HDLBP-236ENST00000477477 CARD10Q9BWT7 1032 aa16.14■□□□□ 0.17
HDLBP-236ENST00000477477 NUP188Q5SRE5 1749 aa16.14■□□□□ 0.17
HDLBP-236ENST00000477477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.17
HDLBP-236ENST00000477477 WNK3Q9BYP7 1800 aa16.12■□□□□ 0.17
HDLBP-236ENST00000477477 NBPF14Q5TI25 921 aa16.12■□□□□ 0.17
HDLBP-236ENST00000477477 NME9Q86XW9 330 aa16.12■□□□□ 0.17
HDLBP-236ENST00000477477 TMC1Q8TDI8 760 aa16.12■□□□□ 0.17
HDLBP-236ENST00000477477 USP54Q70EL1 1684 aa16.11■□□□□ 0.17
HDLBP-236ENST00000477477 BCL9O00512 1426 aa16.11■□□□□ 0.17
HDLBP-236ENST00000477477 HDGFL2Q7Z4V5 671 aaPredicted RBP16.11■□□□□ 0.17
HDLBP-236ENST00000477477 MARCH10Q8NA82 808 aaPredicted RBP16.11■□□□□ 0.17
HDLBP-236ENST00000477477 SLC12A5Q9H2X9 1139 aa16.11■□□□□ 0.17
HDLBP-236ENST00000477477 CCDC7Q96M83 1385 aa16.11■□□□□ 0.17
HDLBP-236ENST00000477477 EDC4Q6P2E9 1401 aaKnown RBP16.11■□□□□ 0.17
HDLBP-236ENST00000477477 PUS7Q96PZ0 661 aaKnown RBP16.1■□□□□ 0.17
HDLBP-236ENST00000477477 RGPD5Q99666 1765 aa16.09■□□□□ 0.17
HDLBP-236ENST00000477477 PLSCR1O15162 318 aa16.09■□□□□ 0.17
HDLBP-236ENST00000477477 BCL11BQ9C0K0 894 aaPredicted RBP16.09■□□□□ 0.17
HDLBP-236ENST00000477477 A0A1W2PP64 1363 aa16.09■□□□□ 0.17
HDLBP-236ENST00000477477 RGPD3A6NKT7 1758 aaPredicted RBP16.08■□□□□ 0.17
HDLBP-236ENST00000477477 RGPD4Q7Z3J3 1758 aa16.08■□□□□ 0.17
HDLBP-236ENST00000477477 PTF1AQ7RTS3 328 aa16.08■□□□□ 0.16
HDLBP-236ENST00000477477 TERF2IPQ9NYB0 399 aa16.08■□□□□ 0.16
HDLBP-236ENST00000477477 ERBB3P21860 1342 aa16.08■□□□□ 0.16
HDLBP-236ENST00000477477 TNS2Q63HR2 1409 aa16.08■□□□□ 0.16
HDLBP-236ENST00000477477 TESK2Q96S53 571 aa16.07■□□□□ 0.16
HDLBP-236ENST00000477477 SBF2Q86WG5 1849 aa16.07■□□□□ 0.16
HDLBP-236ENST00000477477 NINLQ9Y2I6 1382 aa16.06■□□□□ 0.16
HDLBP-236ENST00000477477 EXOC5O00471 708 aa16.06■□□□□ 0.16
HDLBP-236ENST00000477477 ST20-MTHFSA0A0A6YYL1 179 aa16.05■□□□□ 0.16
HDLBP-236ENST00000477477 ANO8Q9HCE9 1232 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-236ENST00000477477 NLRP2Q9NX02 1062 aa16.04■□□□□ 0.16
HDLBP-236ENST00000477477 ANKRD24Q8TF21 1146 aa16.03■□□□□ 0.16
HDLBP-236ENST00000477477 SLC24A1O60721 1099 aa16.02■□□□□ 0.16
HDLBP-236ENST00000477477 PROM2Q8N271 834 aa16.02■□□□□ 0.16
HDLBP-236ENST00000477477 SPON1Q9HCB6 807 aa16.02■□□□□ 0.16
HDLBP-236ENST00000477477 LTN1O94822 1766 aa16.02■□□□□ 0.15
HDLBP-236ENST00000477477 IL2RBP14784 551 aa16.01■□□□□ 0.15
HDLBP-236ENST00000477477 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
HDLBP-236ENST00000477477 KCNQ2O43526 872 aa16■□□□□ 0.15
HDLBP-236ENST00000477477 TXNRD1Q16881 649 aa15.99■□□□□ 0.15
HDLBP-236ENST00000477477 IP6K1Q92551 441 aa15.99■□□□□ 0.15
HDLBP-236ENST00000477477 ANKRD36BQ8N2N9 1353 aa15.99■□□□□ 0.15
HDLBP-236ENST00000477477 COG3Q96JB2 828 aa15.98■□□□□ 0.15
HDLBP-236ENST00000477477 PPP1R1BQ9UD71 204 aaPredicted RBP15.98■□□□□ 0.15
HDLBP-236ENST00000477477 NHSQ6T4R5 1651 aa15.98■□□□□ 0.15
HDLBP-236ENST00000477477 USP47Q96K76 1375 aa15.98■□□□□ 0.15
HDLBP-236ENST00000477477 ACSBG1Q96GR2 724 aa15.97■□□□□ 0.15
HDLBP-236ENST00000477477 CASZ1Q86V15 1759 aa15.97■□□□□ 0.15
HDLBP-236ENST00000477477 MAP3K19Q56UN5 1328 aa15.96■□□□□ 0.15
HDLBP-236ENST00000477477 HOXC9P31274 260 aa15.95■□□□□ 0.14
HDLBP-236ENST00000477477 TMF1P82094 1093 aa15.95■□□□□ 0.14
HDLBP-236ENST00000477477 LTV1Q96GA3 475 aaPredicted RBP15.95■□□□□ 0.14
HDLBP-236ENST00000477477 PDGFDQ9GZP0 370 aaPredicted RBP15.95■□□□□ 0.14
HDLBP-236ENST00000477477 STK32BQ9NY57 414 aa15.95■□□□□ 0.14
HDLBP-236ENST00000477477 SLC15A2Q16348 729 aa15.94■□□□□ 0.14
HDLBP-236ENST00000477477 FAM208AQ9UK61 1670 aaKnown RBP15.94■□□□□ 0.14
HDLBP-236ENST00000477477 FBLN1P23142 703 aa15.93■□□□□ 0.14
HDLBP-236ENST00000477477 AMPHP49418 695 aa15.93■□□□□ 0.14
HDLBP-236ENST00000477477 RTL1A6NKG5 1358 aa15.92■□□□□ 0.14
HDLBP-236ENST00000477477 ZBTB7AO95365 584 aa15.92■□□□□ 0.14
HDLBP-236ENST00000477477 PAPPAQ13219 1627 aa15.91■□□□□ 0.14
HDLBP-236ENST00000477477 FYB1O15117 783 aa15.91■□□□□ 0.14
HDLBP-236ENST00000477477 PTGER2P43116 358 aa15.9■□□□□ 0.14
HDLBP-236ENST00000477477 CDCA8Q53HL2 280 aa15.9■□□□□ 0.14
HDLBP-236ENST00000477477 DDX54Q8TDD1 881 aaKnown RBP15.9■□□□□ 0.14
HDLBP-236ENST00000477477 GGNBP2Q9H3C7 697 aa15.9■□□□□ 0.14
HDLBP-236ENST00000477477 BTAF1O14981 1849 aa15.89■□□□□ 0.13
HDLBP-236ENST00000477477 RRS1Q15050 365 aaKnown RBP15.89■□□□□ 0.13
HDLBP-236ENST00000477477 MEGF6O75095 1541 aa15.89■□□□□ 0.13
HDLBP-236ENST00000477477 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
HDLBP-236ENST00000477477 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
HDLBP-236ENST00000477477 LRRC4BQ9NT99 713 aa15.87■□□□□ 0.13
HDLBP-236ENST00000477477 MYOM1P52179 1685 aa15.86■□□□□ 0.13
HDLBP-236ENST00000477477 ZNF827Q17R98 1081 aa15.86■□□□□ 0.13
HDLBP-236ENST00000477477 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
HDLBP-236ENST00000477477 ZCRB1Q8TBF4 217 aaKnown RBP15.86■□□□□ 0.13
HDLBP-236ENST00000477477 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
HDLBP-236ENST00000477477 SMG6Q86US8 1419 aaKnown RBP15.85■□□□□ 0.13
HDLBP-236ENST00000477477 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
HDLBP-236ENST00000477477 SLC27A3Q5K4L6 730 aa15.85■□□□□ 0.13
HDLBP-236ENST00000477477 SGIP1Q9BQI5 828 aa15.85■□□□□ 0.13
HDLBP-236ENST00000477477 TIMELESSQ9UNS1 1208 aa15.85■□□□□ 0.13
HDLBP-236ENST00000477477 YY1P25490 414 aa15.84■□□□□ 0.13
HDLBP-236ENST00000477477 PRIM1P49642 420 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms