RNA–Protein interactions for RNA: ENST00000476988.2

ITGB5-206, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 492 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-206ENST00000476988 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
ITGB5-206ENST00000476988 CRB1P82279 1406 aa14.65□□□□□ -0.06
ITGB5-206ENST00000476988 CABP1Q9NZU7 370 aa14.64□□□□□ -0.07
ITGB5-206ENST00000476988 OVOS2A0A0G2JMS6 1433 aa14.64□□□□□ -0.07
ITGB5-206ENST00000476988 OVOS2A0A0J9YW53 1432 aa14.64□□□□□ -0.07
ITGB5-206ENST00000476988 OVOS2Q6IE36 1432 aa14.64□□□□□ -0.07
ITGB5-206ENST00000476988 ARHGEF28Q8N1W1 1705 aaKnown RBP14.63□□□□□ -0.07
ITGB5-206ENST00000476988 PLSCR1O15162 318 aa14.63□□□□□ -0.07
ITGB5-206ENST00000476988 KCNQ2O43526 872 aa14.63□□□□□ -0.07
ITGB5-206ENST00000476988 AATKQ6ZMQ8 1374 aa14.62□□□□□ -0.07
ITGB5-206ENST00000476988 YY1P25490 414 aa14.62□□□□□ -0.07
ITGB5-206ENST00000476988 NBPF1Q3BBV0 1214 aa14.62□□□□□ -0.07
ITGB5-206ENST00000476988 PHRF1Q9P1Y6 1649 aaKnown RBP14.62□□□□□ -0.07
ITGB5-206ENST00000476988 KIAA1210Q9ULL0 1709 aa14.61□□□□□ -0.07
ITGB5-206ENST00000476988 EXOC5O00471 708 aa14.61□□□□□ -0.07
ITGB5-206ENST00000476988 BCL11BQ9C0K0 894 aaPredicted RBP14.61□□□□□ -0.07
ITGB5-206ENST00000476988 CAMTA1Q9Y6Y1 1673 aa14.6□□□□□ -0.07
ITGB5-206ENST00000476988 COL5A2P05997 1499 aaPredicted RBP14.59□□□□□ -0.07
ITGB5-206ENST00000476988 CRYBG1Q9Y4K1 1723 aa14.59□□□□□ -0.07
ITGB5-206ENST00000476988 WDR17Q8IZU2 1322 aa14.59□□□□□ -0.07
ITGB5-206ENST00000476988 TTC21AQ8NDW8 1320 aa14.59□□□□□ -0.07
ITGB5-206ENST00000476988 USP6P35125 1406 aa14.58□□□□□ -0.07
ITGB5-206ENST00000476988 STK32BQ9NY57 414 aa14.58□□□□□ -0.08
ITGB5-206ENST00000476988 NRKQ7Z2Y5 1582 aa14.58□□□□□ -0.08
ITGB5-206ENST00000476988 NINLQ9Y2I6 1382 aa14.58□□□□□ -0.08
ITGB5-206ENST00000476988 TNS1Q9HBL0 1735 aaKnown RBP14.58□□□□□ -0.08
ITGB5-206ENST00000476988 TOPAZ1Q8N9V7 1692 aa14.56□□□□□ -0.08
ITGB5-206ENST00000476988 CARD10Q9BWT7 1032 aa14.56□□□□□ -0.08
ITGB5-206ENST00000476988 SOX12O15370 315 aa14.55□□□□□ -0.08
ITGB5-206ENST00000476988 ROCK2O75116 1388 aaKnown RBP14.55□□□□□ -0.08
ITGB5-206ENST00000476988 HDGFL2Q7Z4V5 671 aaPredicted RBP14.54□□□□□ -0.08
ITGB5-206ENST00000476988 ARHGEF25Q86VW2 580 aa14.54□□□□□ -0.08
ITGB5-206ENST00000476988 TTC21BQ7Z4L5 1316 aa14.54□□□□□ -0.08
ITGB5-206ENST00000476988 CCDC7Q96M83 1385 aa14.54□□□□□ -0.08
ITGB5-206ENST00000476988 SLC24A1O60721 1099 aa14.53□□□□□ -0.08
ITGB5-206ENST00000476988 L3MBTL2Q969R5 705 aa14.53□□□□□ -0.08
ITGB5-206ENST00000476988 LMO7Q8WWI1 1683 aa14.52□□□□□ -0.08
ITGB5-206ENST00000476988 KTN1Q86UP2 1357 aaKnown RBP14.52□□□□□ -0.08
ITGB5-206ENST00000476988 NEUROD1Q13562 356 aa14.52□□□□□ -0.09
ITGB5-206ENST00000476988 PARP4Q9UKK3 1724 aaKnown RBP14.52□□□□□ -0.09
ITGB5-206ENST00000476988 CPSF1Q10570 1443 aaKnown RBP14.51□□□□□ -0.09
ITGB5-206ENST00000476988 HMGB2P26583 209 aaKnown RBP14.51□□□□□ -0.09
ITGB5-206ENST00000476988 BCL9O00512 1426 aa14.5□□□□□ -0.09
ITGB5-206ENST00000476988 MARCH10Q8NA82 808 aaPredicted RBP14.5□□□□□ -0.09
ITGB5-206ENST00000476988 TMC1Q8TDI8 760 aa14.5□□□□□ -0.09
ITGB5-206ENST00000476988 NLRP2Q9NX02 1062 aa14.5□□□□□ -0.09
ITGB5-206ENST00000476988 TERF2IPQ9NYB0 399 aa14.5□□□□□ -0.09
ITGB5-206ENST00000476988 AXIN2Q9Y2T1 843 aa14.5□□□□□ -0.09
ITGB5-206ENST00000476988 SLIT3O75094 1523 aa14.5□□□□□ -0.09
ITGB5-206ENST00000476988 SLC15A2Q16348 729 aa14.49□□□□□ -0.09
ITGB5-206ENST00000476988 TXNRD1Q16881 649 aa14.49□□□□□ -0.09
ITGB5-206ENST00000476988 RREB1Q92766 1687 aa14.49□□□□□ -0.09
ITGB5-206ENST00000476988 QRICH2Q9H0J4 1663 aa14.49□□□□□ -0.09
ITGB5-206ENST00000476988 IL2RBP14784 551 aa14.48□□□□□ -0.09
ITGB5-206ENST00000476988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.48□□□□□ -0.09
ITGB5-206ENST00000476988 NUP188Q5SRE5 1749 aa14.47□□□□□ -0.09
ITGB5-206ENST00000476988 ZBTB7AO95365 584 aa14.47□□□□□ -0.09
ITGB5-206ENST00000476988 MTFR1LQ9H019 292 aa14.47□□□□□ -0.09
ITGB5-206ENST00000476988 TRPM1Q7Z4N2 1603 aa14.47□□□□□ -0.09
ITGB5-206ENST00000476988 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
ITGB5-206ENST00000476988 CARD11Q9BXL7 1154 aa14.46□□□□□ -0.09
ITGB5-206ENST00000476988 RGPD3A6NKT7 1758 aaPredicted RBP14.45□□□□□ -0.1
ITGB5-206ENST00000476988 RGPD4Q7Z3J3 1758 aa14.45□□□□□ -0.1
ITGB5-206ENST00000476988 ABCC6O95255 1503 aa14.43□□□□□ -0.1
ITGB5-206ENST00000476988 POLD1P28340 1107 aa14.43□□□□□ -0.1
ITGB5-206ENST00000476988 MKRN4PQ13434 485 aaPredicted RBP14.43□□□□□ -0.1
ITGB5-206ENST00000476988 ANKRD24Q8TF21 1146 aa14.43□□□□□ -0.1
ITGB5-206ENST00000476988 ANO8Q9HCE9 1232 aaPredicted RBP14.43□□□□□ -0.1
ITGB5-206ENST00000476988 LRRC37A3O60309 1634 aa14.42□□□□□ -0.1
ITGB5-206ENST00000476988 ACSBG1Q96GR2 724 aa14.42□□□□□ -0.1
ITGB5-206ENST00000476988 PUS7Q96PZ0 661 aaKnown RBP14.42□□□□□ -0.1
ITGB5-206ENST00000476988 ARXQ96QS3 562 aa14.42□□□□□ -0.1
ITGB5-206ENST00000476988 SIN3AQ96ST3 1273 aa14.42□□□□□ -0.1
ITGB5-206ENST00000476988 USP31Q70CQ4 1352 aa14.42□□□□□ -0.1
ITGB5-206ENST00000476988 SBNO2Q9Y2G9 1366 aa14.42□□□□□ -0.1
ITGB5-206ENST00000476988 ERBB3P21860 1342 aa14.41□□□□□ -0.1
ITGB5-206ENST00000476988 TNS2Q63HR2 1409 aa14.41□□□□□ -0.1
ITGB5-206ENST00000476988 SLC27A3Q5K4L6 730 aa14.41□□□□□ -0.1
ITGB5-206ENST00000476988 PROM2Q8N271 834 aa14.41□□□□□ -0.1
ITGB5-206ENST00000476988 SLC16A10Q8TF71 515 aa14.41□□□□□ -0.1
ITGB5-206ENST00000476988 PIK3C2AO00443 1686 aa14.4□□□□□ -0.1
ITGB5-206ENST00000476988 COG3Q96JB2 828 aa14.4□□□□□ -0.1
ITGB5-206ENST00000476988 SYT17Q9BSW7 474 aa14.4□□□□□ -0.1
ITGB5-206ENST00000476988 FHDC1Q9C0D6 1143 aaPredicted RBP14.4□□□□□ -0.1
ITGB5-206ENST00000476988 TONSLQ96HA7 1378 aa14.39□□□□□ -0.11
ITGB5-206ENST00000476988 PEAK1Q9H792 1746 aa14.39□□□□□ -0.11
ITGB5-206ENST00000476988 GPR162Q16538 588 aa14.39□□□□□ -0.11
ITGB5-206ENST00000476988 DDX54Q8TDD1 881 aaKnown RBP14.39□□□□□ -0.11
ITGB5-206ENST00000476988 AKAP12Q02952 1782 aa14.39□□□□□ -0.11
ITGB5-206ENST00000476988 PTGER2P43116 358 aa14.38□□□□□ -0.11
ITGB5-206ENST00000476988 AMPHP49418 695 aa14.38□□□□□ -0.11
ITGB5-206ENST00000476988 PTF1AQ7RTS3 328 aa14.38□□□□□ -0.11
ITGB5-206ENST00000476988 NME9Q86XW9 330 aa14.38□□□□□ -0.11
ITGB5-206ENST00000476988 SYTL4Q96C24 671 aaPredicted RBP14.38□□□□□ -0.11
ITGB5-206ENST00000476988 EDC4Q6P2E9 1401 aaKnown RBP14.38□□□□□ -0.11
ITGB5-206ENST00000476988 IP6K1Q92551 441 aa14.37□□□□□ -0.11
ITGB5-206ENST00000476988 TFCP2L1Q9NZI6 479 aa14.37□□□□□ -0.11
ITGB5-206ENST00000476988 KLHL34Q8N239 644 aa14.36□□□□□ -0.11
ITGB5-206ENST00000476988 SLC12A5Q9H2X9 1139 aa14.36□□□□□ -0.11
ITGB5-206ENST00000476988 COL18A1P39060 1754 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms