RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 ESPNB1AK53 854 aa9.55□□□□□ -0.88
SOX2-OT-207ENST00000476964 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
SOX2-OT-207ENST00000476964 ABL2P42684 1182 aa9.55□□□□□ -0.88
SOX2-OT-207ENST00000476964 WASHC4Q2M389 1173 aa9.54□□□□□ -0.88
SOX2-OT-207ENST00000476964 NBPF20Q3BBV1 942 aa9.54□□□□□ -0.88
SOX2-OT-207ENST00000476964 ZNF330Q9Y3S2 320 aaPredicted RBP9.54□□□□□ -0.88
SOX2-OT-207ENST00000476964 FSHRP23945 695 aa9.53□□□□□ -0.88
SOX2-OT-207ENST00000476964 GTF3C3Q9Y5Q9 886 aa9.53□□□□□ -0.88
SOX2-OT-207ENST00000476964 AXIN1O15169 862 aa9.52□□□□□ -0.89
SOX2-OT-207ENST00000476964 RAD21O60216 631 aa9.52□□□□□ -0.89
SOX2-OT-207ENST00000476964 TIMP2P16035 220 aa9.52□□□□□ -0.89
SOX2-OT-207ENST00000476964 INTS6LQ5JSJ4 861 aaKnown RBP9.52□□□□□ -0.89
SOX2-OT-207ENST00000476964 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.89
SOX2-OT-207ENST00000476964 CCDC116Q8IYX3 515 aa9.52□□□□□ -0.89
SOX2-OT-207ENST00000476964 ZNF592Q92610 1267 aa9.52□□□□□ -0.89
SOX2-OT-207ENST00000476964 PCDHB9Q9Y5E1 797 aa9.52□□□□□ -0.89
SOX2-OT-207ENST00000476964 ST8SIA5O15466 376 aa9.51□□□□□ -0.89
SOX2-OT-207ENST00000476964 VAC14Q08AM6 782 aa9.51□□□□□ -0.89
SOX2-OT-207ENST00000476964 FNBP4Q8N3X1 1017 aaPredicted RBP9.51□□□□□ -0.89
SOX2-OT-207ENST00000476964 A6NJR5 290 aa9.5□□□□□ -0.89
SOX2-OT-207ENST00000476964 CAPN5O15484 640 aaPredicted RBP9.5□□□□□ -0.89
SOX2-OT-207ENST00000476964 GIGYF1O75420 1035 aaPredicted RBP9.5□□□□□ -0.89
SOX2-OT-207ENST00000476964 WDR4P57081 412 aaKnown RBP9.5□□□□□ -0.89
SOX2-OT-207ENST00000476964 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.89
SOX2-OT-207ENST00000476964 CLUAP1Q96AJ1 413 aa9.5□□□□□ -0.89
SOX2-OT-207ENST00000476964 ITPKCQ96DU7 683 aa9.5□□□□□ -0.89
SOX2-OT-207ENST00000476964 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
SOX2-OT-207ENST00000476964 DACH1Q9UI36 760 aa9.5□□□□□ -0.89
SOX2-OT-207ENST00000476964 EMILIN1Q9Y6C2 1016 aa9.5□□□□□ -0.89
SOX2-OT-207ENST00000476964 DHX9Q08211 1270 aaKnown RBP9.49□□□□□ -0.89
SOX2-OT-207ENST00000476964 PPP1R26Q5T8A7 1209 aaPredicted RBP9.49□□□□□ -0.89
SOX2-OT-207ENST00000476964 CCDC125Q86Z20 511 aa9.49□□□□□ -0.89
SOX2-OT-207ENST00000476964 SOX11P35716 441 aa9.48□□□□□ -0.89
SOX2-OT-207ENST00000476964 PHTF2Q8N3S3 785 aa9.48□□□□□ -0.89
SOX2-OT-207ENST00000476964 ZIC2O95409 532 aaPredicted RBP9.47□□□□□ -0.89
SOX2-OT-207ENST00000476964 ALG2Q9H553 416 aa9.47□□□□□ -0.89
SOX2-OT-207ENST00000476964 ZFAND3Q9H8U3 227 aa9.47□□□□□ -0.89
SOX2-OT-207ENST00000476964 ERVH48-1M5A8F1 160 aa9.46□□□□□ -0.9
SOX2-OT-207ENST00000476964 RNF20Q5VTR2 975 aa9.46□□□□□ -0.9
SOX2-OT-207ENST00000476964 Q6ZVU0 165 aa9.45□□□□□ -0.9
SOX2-OT-207ENST00000476964 WWC1Q8IX03 1113 aa9.45□□□□□ -0.9
SOX2-OT-207ENST00000476964 ATP13A2Q9NQ11 1180 aa9.45□□□□□ -0.9
SOX2-OT-207ENST00000476964 PGPEP1Q9NXJ5 209 aa9.45□□□□□ -0.9
SOX2-OT-207ENST00000476964 CHIC2Q9UKJ5 165 aa9.45□□□□□ -0.9
SOX2-OT-207ENST00000476964 LILRA1O75019 489 aa9.44□□□□□ -0.9
SOX2-OT-207ENST00000476964 PROSER2Q86WR7 435 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-207ENST00000476964 TMPRSS4Q9NRS4 437 aa9.44□□□□□ -0.9
SOX2-OT-207ENST00000476964 TRIM46Q7Z4K8 759 aa9.43□□□□□ -0.9
SOX2-OT-207ENST00000476964 POTECB2RU33 542 aa9.42□□□□□ -0.9
SOX2-OT-207ENST00000476964 SEMA3FQ13275 785 aa9.42□□□□□ -0.9
SOX2-OT-207ENST00000476964 ZNF784Q8NCA9 323 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-207ENST00000476964 POM121CA8CG34 1229 aa9.41□□□□□ -0.9
SOX2-OT-207ENST00000476964 MEIOBQ8N635 442 aa9.41□□□□□ -0.9
SOX2-OT-207ENST00000476964 ADAMTS19Q8TE59 1207 aa9.41□□□□□ -0.9
SOX2-OT-207ENST00000476964 ADD1P35611 737 aaKnown RBP9.4□□□□□ -0.9
SOX2-OT-207ENST00000476964 RAB15P59190 212 aa9.4□□□□□ -0.9
SOX2-OT-207ENST00000476964 CBLBQ13191 982 aa9.4□□□□□ -0.9
SOX2-OT-207ENST00000476964 TSGA10IPQ3SY00 556 aa9.4□□□□□ -0.9
SOX2-OT-207ENST00000476964 MRPL14Q6P1L8 145 aaKnown RBP9.4□□□□□ -0.9
SOX2-OT-207ENST00000476964 GMPR2Q9P2T1 348 aaKnown RBP9.4□□□□□ -0.9
SOX2-OT-207ENST00000476964 BMP1P13497 986 aa9.39□□□□□ -0.91
SOX2-OT-207ENST00000476964 ERVK-9P63128 1117 aa9.39□□□□□ -0.91
SOX2-OT-207ENST00000476964 KDF1Q8NAX2 398 aaPredicted RBP9.39□□□□□ -0.91
SOX2-OT-207ENST00000476964 TRIM52Q96A61 297 aa9.39□□□□□ -0.91
SOX2-OT-207ENST00000476964 CCDC85AQ96PX6 553 aaPredicted RBP9.39□□□□□ -0.91
SOX2-OT-207ENST00000476964 TRAK2O60296 914 aa9.38□□□□□ -0.91
SOX2-OT-207ENST00000476964 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
SOX2-OT-207ENST00000476964 HDGFL1Q5TGJ6 251 aa9.37□□□□□ -0.91
SOX2-OT-207ENST00000476964 ZFP42Q96MM3 310 aa9.37□□□□□ -0.91
SOX2-OT-207ENST00000476964 TSEN34Q9BSV6 310 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-207ENST00000476964 ZMYND15Q9H091 742 aa9.37□□□□□ -0.91
SOX2-OT-207ENST00000476964 SENP2Q9HC62 589 aa9.37□□□□□ -0.91
SOX2-OT-207ENST00000476964 ZNF787Q6DD87 383 aa9.36□□□□□ -0.91
SOX2-OT-207ENST00000476964 CC2D2BQ6DHV5 1058 aa9.36□□□□□ -0.91
SOX2-OT-207ENST00000476964 LINC00528Q8N1L1 170 aa9.36□□□□□ -0.91
SOX2-OT-207ENST00000476964 TRIM47Q96LD4 638 aa9.36□□□□□ -0.91
SOX2-OT-207ENST00000476964 CDCA7Q9BWT1 371 aaPredicted RBP9.36□□□□□ -0.91
SOX2-OT-207ENST00000476964 SCTRP47872 440 aa9.35□□□□□ -0.91
SOX2-OT-207ENST00000476964 MAP7D1Q3KQU3 841 aa9.35□□□□□ -0.91
SOX2-OT-207ENST00000476964 RNF135Q8IUD6 432 aa9.35□□□□□ -0.91
SOX2-OT-207ENST00000476964 NFATC2IPQ8NCF5 419 aa9.35□□□□□ -0.91
SOX2-OT-207ENST00000476964 KIFC2Q96AC6 838 aa9.35□□□□□ -0.91
SOX2-OT-207ENST00000476964 CYLDQ9NQC7 956 aa9.35□□□□□ -0.91
SOX2-OT-207ENST00000476964 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
SOX2-OT-207ENST00000476964 ADH1AP07327 375 aa9.34□□□□□ -0.91
SOX2-OT-207ENST00000476964 SCARF1Q14162 830 aa9.34□□□□□ -0.91
SOX2-OT-207ENST00000476964 PURBQ96QR8 312 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-207ENST00000476964 PIK3CDO00329 1044 aa9.33□□□□□ -0.92
SOX2-OT-207ENST00000476964 SPINT1O43278 529 aa9.33□□□□□ -0.92
SOX2-OT-207ENST00000476964 OSBPL3Q9H4L5 887 aa9.33□□□□□ -0.92
SOX2-OT-207ENST00000476964 C11orf95C9JLR9 678 aaPredicted RBP9.32□□□□□ -0.92
SOX2-OT-207ENST00000476964 UPP2O95045 317 aa9.32□□□□□ -0.92
SOX2-OT-207ENST00000476964 SNRPBP14678 240 aaKnown RBP9.32□□□□□ -0.92
SOX2-OT-207ENST00000476964 PTGIRP43119 386 aa9.32□□□□□ -0.92
SOX2-OT-207ENST00000476964 USP4Q13107 963 aa9.32□□□□□ -0.92
SOX2-OT-207ENST00000476964 PLPP7Q8NBV4 271 aa9.32□□□□□ -0.92
SOX2-OT-207ENST00000476964 GLMNQ92990 594 aa9.32□□□□□ -0.92
SOX2-OT-207ENST00000476964 AGBL1Q96MI9 1066 aa9.32□□□□□ -0.92
SOX2-OT-207ENST00000476964 UCN2Q96RP3 112 aa9.32□□□□□ -0.92
SOX2-OT-207ENST00000476964 DOLKQ9UPQ8 538 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms