RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 ABCC6O95255 1503 aa18.05■□□□□ 0.48
HLA-DPA1-246ENST00000476642 NFAT5O94916 1531 aa18.04■□□□□ 0.48
HLA-DPA1-246ENST00000476642 ONECUT3O60422 494 aaPredicted RBP18.04■□□□□ 0.48
HLA-DPA1-246ENST00000476642 FAM98CQ17RN3 349 aaKnown RBP18.03■□□□□ 0.48
HLA-DPA1-246ENST00000476642 DEFB132Q7Z7B7 95 aa18.03■□□□□ 0.48
HLA-DPA1-246ENST00000476642 LTN1O94822 1766 aa18.03■□□□□ 0.48
HLA-DPA1-246ENST00000476642 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
HLA-DPA1-246ENST00000476642 SOX12O15370 315 aa18.02■□□□□ 0.48
HLA-DPA1-246ENST00000476642 ARHGEF25Q86VW2 580 aa18.02■□□□□ 0.48
HLA-DPA1-246ENST00000476642 ZNF316A6NFI3 1004 aaPredicted RBP18.01■□□□□ 0.47
HLA-DPA1-246ENST00000476642 PER1O15534 1290 aaPredicted RBP18.01■□□□□ 0.47
HLA-DPA1-246ENST00000476642 NPC1L1Q9UHC9 1359 aa18.01■□□□□ 0.47
HLA-DPA1-246ENST00000476642 LMO7Q8WWI1 1683 aa17.99■□□□□ 0.47
HLA-DPA1-246ENST00000476642 NRAPQ86VF7 1730 aa17.99■□□□□ 0.47
HLA-DPA1-246ENST00000476642 ZBTB7CA1YPR0 619 aa17.99■□□□□ 0.47
HLA-DPA1-246ENST00000476642 BAG6P46379 1132 aa17.99■□□□□ 0.47
HLA-DPA1-246ENST00000476642 CHRNA2Q15822 529 aa17.99■□□□□ 0.47
HLA-DPA1-246ENST00000476642 KIF24Q5T7B8 1368 aa17.99■□□□□ 0.47
HLA-DPA1-246ENST00000476642 BRWD3Q6RI45 1802 aa17.98■□□□□ 0.47
HLA-DPA1-246ENST00000476642 EVA1CP58658 441 aa17.98■□□□□ 0.47
HLA-DPA1-246ENST00000476642 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
HLA-DPA1-246ENST00000476642 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
HLA-DPA1-246ENST00000476642 COL18A1P39060 1754 aa17.98■□□□□ 0.47
HLA-DPA1-246ENST00000476642 RTL1A6NKG5 1358 aa17.97■□□□□ 0.47
HLA-DPA1-246ENST00000476642 MAP2P11137 1827 aaKnown RBP17.96■□□□□ 0.47
HLA-DPA1-246ENST00000476642 AMPHP49418 695 aa17.96■□□□□ 0.47
HLA-DPA1-246ENST00000476642 EP400Q96L91 3159 aa17.96■□□□□ 0.47
HLA-DPA1-246ENST00000476642 CAMTA1Q9Y6Y1 1673 aa17.96■□□□□ 0.47
HLA-DPA1-246ENST00000476642 SPATA31A5Q5VU36 1347 aa17.96■□□□□ 0.46
HLA-DPA1-246ENST00000476642 SPATA31A7Q8IWB4 1347 aa17.96■□□□□ 0.46
HLA-DPA1-246ENST00000476642 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
HLA-DPA1-246ENST00000476642 IP6K1Q92551 441 aa17.94■□□□□ 0.46
HLA-DPA1-246ENST00000476642 STRN4Q9NRL3 753 aa17.94■□□□□ 0.46
HLA-DPA1-246ENST00000476642 MAP3K19Q56UN5 1328 aa17.94■□□□□ 0.46
HLA-DPA1-246ENST00000476642 COL5A2P05997 1499 aaPredicted RBP17.94■□□□□ 0.46
HLA-DPA1-246ENST00000476642 RGPD5Q99666 1765 aa17.94■□□□□ 0.46
HLA-DPA1-246ENST00000476642 FAM208AQ9UK61 1670 aaKnown RBP17.93■□□□□ 0.46
HLA-DPA1-246ENST00000476642 FLT4P35916 1363 aa17.92■□□□□ 0.46
HLA-DPA1-246ENST00000476642 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
HLA-DPA1-246ENST00000476642 SMG6Q86US8 1419 aaKnown RBP17.91■□□□□ 0.46
HLA-DPA1-246ENST00000476642 CSB-PGBD3P0DP91 1061 aa17.91■□□□□ 0.46
HLA-DPA1-246ENST00000476642 HOXC9P31274 260 aa17.91■□□□□ 0.46
HLA-DPA1-246ENST00000476642 RRS1Q15050 365 aaKnown RBP17.91■□□□□ 0.46
HLA-DPA1-246ENST00000476642 FAM182BQ5T319 152 aa17.91■□□□□ 0.46
HLA-DPA1-246ENST00000476642 WDR17Q8IZU2 1322 aa17.91■□□□□ 0.46
HLA-DPA1-246ENST00000476642 CRB1P82279 1406 aa17.9■□□□□ 0.46
HLA-DPA1-246ENST00000476642 TNNT2P45379 298 aaPredicted RBP17.9■□□□□ 0.46
HLA-DPA1-246ENST00000476642 AXIN2Q9Y2T1 843 aa17.9■□□□□ 0.46
HLA-DPA1-246ENST00000476642 SPATA31A1Q5TZJ5 1347 aa17.9■□□□□ 0.46
HLA-DPA1-246ENST00000476642 TOM1L2Q6ZVM7 507 aa17.89■□□□□ 0.45
HLA-DPA1-246ENST00000476642 USP35Q9P2H5 1018 aa17.89■□□□□ 0.45
HLA-DPA1-246ENST00000476642 THRAP3Q9Y2W1 955 aaKnown RBP17.89■□□□□ 0.45
HLA-DPA1-246ENST00000476642 ERBB3P21860 1342 aa17.89■□□□□ 0.45
HLA-DPA1-246ENST00000476642 INSRP06213 1382 aa17.89■□□□□ 0.45
HLA-DPA1-246ENST00000476642 PSDA5PKW4 1024 aaPredicted RBP17.88■□□□□ 0.45
HLA-DPA1-246ENST00000476642 EN1Q05925 392 aaPredicted RBP17.88■□□□□ 0.45
HLA-DPA1-246ENST00000476642 POLKQ9UBT6 870 aa17.88■□□□□ 0.45
HLA-DPA1-246ENST00000476642 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
HLA-DPA1-246ENST00000476642 FBLN1P23142 703 aa17.87■□□□□ 0.45
HLA-DPA1-246ENST00000476642 LARP1Q6PKG0 1096 aaKnown RBP17.87■□□□□ 0.45
HLA-DPA1-246ENST00000476642 FAM196AQ6ZSG2 479 aa17.87■□□□□ 0.45
HLA-DPA1-246ENST00000476642 ANKRD24Q8TF21 1146 aa17.87■□□□□ 0.45
HLA-DPA1-246ENST00000476642 PDE3BQ13370 1112 aa17.86■□□□□ 0.45
HLA-DPA1-246ENST00000476642 EMILIN1Q9Y6C2 1016 aa17.86■□□□□ 0.45
HLA-DPA1-246ENST00000476642 PEAK1Q9H792 1746 aa17.86■□□□□ 0.45
HLA-DPA1-246ENST00000476642 TCP11L2Q8N4U5 519 aa17.85■□□□□ 0.45
HLA-DPA1-246ENST00000476642 CARD10Q9BWT7 1032 aa17.85■□□□□ 0.45
HLA-DPA1-246ENST00000476642 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
HLA-DPA1-246ENST00000476642 CNGB1Q14028 1251 aaPredicted RBP17.84■□□□□ 0.45
HLA-DPA1-246ENST00000476642 BARGINQ6ZT62 677 aa17.84■□□□□ 0.45
HLA-DPA1-246ENST00000476642 CDCA7Q9BWT1 371 aaPredicted RBP17.84■□□□□ 0.45
HLA-DPA1-246ENST00000476642 TRIM37O94972 964 aa17.83■□□□□ 0.44
HLA-DPA1-246ENST00000476642 RALBP1Q15311 655 aa17.83■□□□□ 0.44
HLA-DPA1-246ENST00000476642 HSP90AB2PQ58FF8 381 aa17.83■□□□□ 0.44
HLA-DPA1-246ENST00000476642 NLRP2Q9NX02 1062 aa17.83■□□□□ 0.44
HLA-DPA1-246ENST00000476642 RGPD1P0DJD0 1748 aa17.82■□□□□ 0.44
HLA-DPA1-246ENST00000476642 LTV1Q96GA3 475 aaPredicted RBP17.82■□□□□ 0.44
HLA-DPA1-246ENST00000476642 THSD7AQ9UPZ6 1657 aa17.82■□□□□ 0.44
HLA-DPA1-246ENST00000476642 APBA3O96018 575 aa17.81■□□□□ 0.44
HLA-DPA1-246ENST00000476642 PARD3Q8TEW0 1356 aa17.8■□□□□ 0.44
HLA-DPA1-246ENST00000476642 WNK3Q9BYP7 1800 aa17.8■□□□□ 0.44
HLA-DPA1-246ENST00000476642 MTHFSP49914 203 aa17.8■□□□□ 0.44
HLA-DPA1-246ENST00000476642 R3HDM1Q15032 1099 aaKnown RBP17.8■□□□□ 0.44
HLA-DPA1-246ENST00000476642 EZH2Q15910 746 aaKnown RBP17.8■□□□□ 0.44
HLA-DPA1-246ENST00000476642 CFAP53Q96M91 514 aa17.8■□□□□ 0.44
HLA-DPA1-246ENST00000476642 DISP2A7MBM2 1401 aa17.79■□□□□ 0.44
HLA-DPA1-246ENST00000476642 PARP4Q9UKK3 1724 aaKnown RBP17.78■□□□□ 0.44
HLA-DPA1-246ENST00000476642 RGPD2P0DJD1 1756 aa17.77■□□□□ 0.44
HLA-DPA1-246ENST00000476642 PPP2R1AP30153 589 aa17.77■□□□□ 0.44
HLA-DPA1-246ENST00000476642 CAMKK2Q96RR4 588 aa17.76■□□□□ 0.43
HLA-DPA1-246ENST00000476642 LRP5O75197 1615 aa17.76■□□□□ 0.43
HLA-DPA1-246ENST00000476642 IL2RBP14784 551 aa17.75■□□□□ 0.43
HLA-DPA1-246ENST00000476642 EIF4A2Q14240 407 aaKnown RBP17.75■□□□□ 0.43
HLA-DPA1-246ENST00000476642 NBPF14Q5TI25 921 aa17.75■□□□□ 0.43
HLA-DPA1-246ENST00000476642 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
HLA-DPA1-246ENST00000476642 NBPF6Q5VWK0 638 aa17.74■□□□□ 0.43
HLA-DPA1-246ENST00000476642 RAPGEF4Q8WZA2 1011 aa17.74■□□□□ 0.43
HLA-DPA1-246ENST00000476642 NBPF4Q96M43 638 aa17.74■□□□□ 0.43
HLA-DPA1-246ENST00000476642 MYBBP1AQ9BQG0 1328 aaKnown RBP17.73■□□□□ 0.43
HLA-DPA1-246ENST00000476642 DDB1Q16531 1140 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms