RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 NBPF11Q86T75 865 aa5.21□□□□□ -1.58
CD55-208ENST00000476590 CYP4X1Q8N118 509 aa5.21□□□□□ -1.58
CD55-208ENST00000476590 EFCC1Q9HA90 598 aa5.21□□□□□ -1.58
CD55-208ENST00000476590 DHX57Q6P158 1386 aaKnown RBP5.2□□□□□ -1.58
CD55-208ENST00000476590 UQCRHLA0A096LP55 91 aa5.2□□□□□ -1.58
CD55-208ENST00000476590 TTC36A6NLP5 189 aa5.2□□□□□ -1.58
CD55-208ENST00000476590 UQCRHP07919 91 aa5.2□□□□□ -1.58
CD55-208ENST00000476590 KCNJ4P48050 445 aa5.2□□□□□ -1.58
CD55-208ENST00000476590 PANK2Q9BZ23 570 aa5.2□□□□□ -1.58
CD55-208ENST00000476590 KIAA1468Q9P260 1216 aa5.2□□□□□ -1.58
CD55-208ENST00000476590 PHLDB1Q86UU1 1377 aa5.2□□□□□ -1.58
CD55-208ENST00000476590 CCDC66A2RUB6 948 aa5.19□□□□□ -1.58
CD55-208ENST00000476590 MAFGO15525 162 aa5.19□□□□□ -1.58
CD55-208ENST00000476590 NLRP6P59044 892 aa5.19□□□□□ -1.58
CD55-208ENST00000476590 PROX2Q3B8N5 592 aa5.19□□□□□ -1.58
CD55-208ENST00000476590 CHMP4CQ96CF2 233 aa5.19□□□□□ -1.58
CD55-208ENST00000476590 TOR4AQ9NXH8 423 aa5.19□□□□□ -1.58
CD55-208ENST00000476590 SATB1Q01826 763 aa5.19□□□□□ -1.58
CD55-208ENST00000476590 IRF6O14896 467 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 VEGFBP49765 207 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 FOXC1Q12948 553 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 SEMA3FQ13275 785 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 ZDHHC16Q969W1 377 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 RAI14Q9P0K7 980 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 PKD2L1Q9P0L9 805 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 ZCCHC6Q5VYS8 1495 aaKnown RBP5.18□□□□□ -1.58
CD55-208ENST00000476590 RNF123Q5XPI4 1314 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 TRIM6-TRIM34B2RNG4 842 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 TULP2O00295 520 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 NBPF9Q3BBW0 867 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 ZSCAN30Q86W11 494 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 TIGD1Q96MW7 591 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 MYCBPQ99417 103 aaPredicted RBP5.18□□□□□ -1.58
CD55-208ENST00000476590 TRIM34Q9BYJ4 488 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 R3HCC1Q9Y3T6 440 aaKnown RBP5.18□□□□□ -1.58
CD55-208ENST00000476590 KIF3AQ9Y496 699 aa5.18□□□□□ -1.58
CD55-208ENST00000476590 LOC102724159A0A0B4J2E5 919 aa5.17□□□□□ -1.58
CD55-208ENST00000476590 A6NJR5 290 aa5.17□□□□□ -1.58
CD55-208ENST00000476590 GOLIM4O00461 696 aa5.17□□□□□ -1.58
CD55-208ENST00000476590 MSNP26038 577 aaKnown RBP5.17□□□□□ -1.58
CD55-208ENST00000476590 MAP2K1Q02750 393 aaPredicted RBP5.17□□□□□ -1.58
CD55-208ENST00000476590 PWP2Q15269 919 aaKnown RBP5.17□□□□□ -1.58
CD55-208ENST00000476590 ZNF771Q7L3S4 317 aaPredicted RBP5.17□□□□□ -1.58
CD55-208ENST00000476590 IGSF5Q9NSI5 407 aa5.17□□□□□ -1.58
CD55-208ENST00000476590 CEP83Q9Y592 693 aa5.17□□□□□ -1.58
CD55-208ENST00000476590 ZNF500O60304 480 aaPredicted RBP5.16□□□□□ -1.58
CD55-208ENST00000476590 SLC4A3P48751 1232 aa5.16□□□□□ -1.58
CD55-208ENST00000476590 CBX1P83916 185 aa5.16□□□□□ -1.58
CD55-208ENST00000476590 SCARF2Q96GP6 870 aaPredicted RBP5.16□□□□□ -1.58
CD55-208ENST00000476590 GRPEL1Q9HAV7 217 aa5.16□□□□□ -1.58
CD55-208ENST00000476590 CSPP1Q1MSJ5 1256 aa5.16□□□□□ -1.58
CD55-208ENST00000476590 SIN3AQ96ST3 1273 aa5.16□□□□□ -1.58
CD55-208ENST00000476590 ARID1BQ8NFD5 2236 aaPredicted RBP5.15□□□□□ -1.58
CD55-208ENST00000476590 PLEKHG3A1L390 1219 aa5.15□□□□□ -1.58
CD55-208ENST00000476590 CCDC172P0C7W6 258 aa5.15□□□□□ -1.58
CD55-208ENST00000476590 VSIG8P0DPA2 414 aa5.15□□□□□ -1.58
CD55-208ENST00000476590 FLIIQ13045 1269 aa5.15□□□□□ -1.58
CD55-208ENST00000476590 BECN1Q14457 450 aa5.15□□□□□ -1.58
CD55-208ENST00000476590 PLA2G4EQ3MJ16 856 aa5.15□□□□□ -1.58
CD55-208ENST00000476590 SASS6Q6UVJ0 657 aa5.15□□□□□ -1.58
CD55-208ENST00000476590 EP400NLQ6ZTU2 488 aa5.15□□□□□ -1.58
CD55-208ENST00000476590 ZBTB9Q96C00 473 aa5.15□□□□□ -1.58
CD55-208ENST00000476590 SMG6Q86US8 1419 aaKnown RBP5.15□□□□□ -1.58
CD55-208ENST00000476590 NINLQ9Y2I6 1382 aa5.15□□□□□ -1.59
CD55-208ENST00000476590 TESPA1A2RU30 521 aaPredicted RBP5.15□□□□□ -1.59
CD55-208ENST00000476590 BRD1O95696 1058 aa5.15□□□□□ -1.59
CD55-208ENST00000476590 SSR1P43307 286 aaKnown RBP5.15□□□□□ -1.59
CD55-208ENST00000476590 MARSP56192 900 aaKnown RBP5.15□□□□□ -1.59
CD55-208ENST00000476590 GABPB1Q06547 395 aaPredicted RBP5.15□□□□□ -1.59
CD55-208ENST00000476590 NBPF10Q6P3W6 841 aaKnown RBP5.15□□□□□ -1.59
CD55-208ENST00000476590 CTR9Q6PD62 1173 aa5.15□□□□□ -1.59
CD55-208ENST00000476590 NCAPGQ9BPX3 1015 aa5.15□□□□□ -1.59
CD55-208ENST00000476590 SMC4Q9NTJ3 1288 aa5.15□□□□□ -1.59
CD55-208ENST00000476590 RBM28Q9NW13 759 aaKnown RBP5.15□□□□□ -1.59
CD55-208ENST00000476590 TERF2IPQ9NYB0 399 aa5.15□□□□□ -1.59
CD55-208ENST00000476590 CALCOCO1Q9P1Z2 691 aa5.15□□□□□ -1.59
CD55-208ENST00000476590 SEPT9Q9UHD8 586 aaPredicted RBP5.15□□□□□ -1.59
CD55-208ENST00000476590 CEP162Q5TB80 1403 aa5.15□□□□□ -1.59
CD55-208ENST00000476590 CAPN2P17655 700 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 CCDC173Q0VFZ6 552 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 CT47A1Q5JQC4 288 aaPredicted RBP5.14□□□□□ -1.59
CD55-208ENST00000476590 MPNDQ8N594 471 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 OTUD6BQ8N6M0 293 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 SIRT1Q96EB6 747 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 JPH4Q96JJ6 628 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 AK7Q96M32 723 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 ADAM33Q9BZ11 813 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 BSDC1Q9NW68 430 aaPredicted RBP5.14□□□□□ -1.59
CD55-208ENST00000476590 CFAP65Q6ZU64 1925 aaKnown RBP5.14□□□□□ -1.59
CD55-208ENST00000476590 PRDM2Q13029 1718 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 CDCA8Q53HL2 280 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 NBPF6Q5VWK0 638 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 CASC1Q6TDU7 716 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 NBPF5PQ86XG9 351 aaPredicted RBP5.14□□□□□ -1.59
CD55-208ENST00000476590 RNF217Q8TC41 542 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 POM121Q96HA1 1249 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 NBPF4Q96M43 638 aa5.14□□□□□ -1.59
CD55-208ENST00000476590 ARIH1Q9Y4X5 557 aaPredicted RBP5.14□□□□□ -1.59
CD55-208ENST00000476590 CARNS1A5YM72 827 aa5.13□□□□□ -1.59
CD55-208ENST00000476590 PLEKHD1A6NEE1 506 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms