RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 CDCA7Q9BWT1 371 aaPredicted RBP11.9□□□□□ -0.5
SATB1-213ENST00000476178 PARD3Q8TEW0 1356 aa11.9□□□□□ -0.5
SATB1-213ENST00000476178 ST20-MTHFSA0A0A6YYL1 179 aa11.89□□□□□ -0.51
SATB1-213ENST00000476178 PUS7Q96PZ0 661 aaKnown RBP11.89□□□□□ -0.51
SATB1-213ENST00000476178 SLC12A5Q9H2X9 1139 aa11.89□□□□□ -0.51
SATB1-213ENST00000476178 TERF2IPQ9NYB0 399 aa11.89□□□□□ -0.51
SATB1-213ENST00000476178 SLIT3O75094 1523 aa11.89□□□□□ -0.51
SATB1-213ENST00000476178 EXOC5O00471 708 aa11.88□□□□□ -0.51
SATB1-213ENST00000476178 NME9Q86XW9 330 aa11.88□□□□□ -0.51
SATB1-213ENST00000476178 CARD10Q9BWT7 1032 aa11.88□□□□□ -0.51
SATB1-213ENST00000476178 CD163L1Q9NR16 1453 aa11.88□□□□□ -0.51
SATB1-213ENST00000476178 PIK3C2AO00443 1686 aa11.87□□□□□ -0.51
SATB1-213ENST00000476178 OVOS2A0A0G2JMS6 1433 aa11.87□□□□□ -0.51
SATB1-213ENST00000476178 OVOS2A0A0J9YW53 1432 aa11.87□□□□□ -0.51
SATB1-213ENST00000476178 OVOS2Q6IE36 1432 aa11.87□□□□□ -0.51
SATB1-213ENST00000476178 TNS1Q9HBL0 1735 aaKnown RBP11.87□□□□□ -0.51
SATB1-213ENST00000476178 NLRP2Q9NX02 1062 aa11.87□□□□□ -0.51
SATB1-213ENST00000476178 TIMELESSQ9UNS1 1208 aa11.87□□□□□ -0.51
SATB1-213ENST00000476178 AKAP12Q02952 1782 aa11.87□□□□□ -0.51
SATB1-213ENST00000476178 MARCH10Q8NA82 808 aaPredicted RBP11.86□□□□□ -0.51
SATB1-213ENST00000476178 PCGF6Q9BYE7 350 aa11.86□□□□□ -0.51
SATB1-213ENST00000476178 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
SATB1-213ENST00000476178 SRCAPQ6ZRS2 3230 aa11.85□□□□□ -0.51
SATB1-213ENST00000476178 LRP5O75197 1615 aa11.85□□□□□ -0.51
SATB1-213ENST00000476178 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
SATB1-213ENST00000476178 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
SATB1-213ENST00000476178 PLSCR1O15162 318 aa11.84□□□□□ -0.51
SATB1-213ENST00000476178 SLC24A1O60721 1099 aa11.84□□□□□ -0.51
SATB1-213ENST00000476178 PTF1AQ7RTS3 328 aa11.84□□□□□ -0.51
SATB1-213ENST00000476178 PPP1R1BQ9UD71 204 aaPredicted RBP11.84□□□□□ -0.51
SATB1-213ENST00000476178 PARP4Q9UKK3 1724 aaKnown RBP11.83□□□□□ -0.52
SATB1-213ENST00000476178 CCDC7Q96M83 1385 aa11.83□□□□□ -0.52
SATB1-213ENST00000476178 COL18A1P39060 1754 aa11.83□□□□□ -0.52
SATB1-213ENST00000476178 MON2Q7Z3U7 1717 aa11.83□□□□□ -0.52
SATB1-213ENST00000476178 A0A1W2PP64 1363 aa11.82□□□□□ -0.52
SATB1-213ENST00000476178 ANKRD24Q8TF21 1146 aa11.82□□□□□ -0.52
SATB1-213ENST00000476178 LTV1Q96GA3 475 aaPredicted RBP11.82□□□□□ -0.52
SATB1-213ENST00000476178 SPON1Q9HCB6 807 aa11.82□□□□□ -0.52
SATB1-213ENST00000476178 EDC4Q6P2E9 1401 aaKnown RBP11.81□□□□□ -0.52
SATB1-213ENST00000476178 IL2RBP14784 551 aa11.81□□□□□ -0.52
SATB1-213ENST00000476178 COG3Q96JB2 828 aa11.81□□□□□ -0.52
SATB1-213ENST00000476178 ERBB3P21860 1342 aa11.81□□□□□ -0.52
SATB1-213ENST00000476178 NFAT5O94916 1531 aa11.81□□□□□ -0.52
SATB1-213ENST00000476178 USP47Q96K76 1375 aa11.8□□□□□ -0.52
SATB1-213ENST00000476178 RGPD5Q99666 1765 aa11.8□□□□□ -0.52
SATB1-213ENST00000476178 LRRC37A3O60309 1634 aa11.8□□□□□ -0.52
SATB1-213ENST00000476178 KCNQ2O43526 872 aa11.8□□□□□ -0.52
SATB1-213ENST00000476178 ACSBG1Q96GR2 724 aa11.8□□□□□ -0.52
SATB1-213ENST00000476178 NINLQ9Y2I6 1382 aa11.79□□□□□ -0.52
SATB1-213ENST00000476178 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
SATB1-213ENST00000476178 AMPHP49418 695 aa11.79□□□□□ -0.52
SATB1-213ENST00000476178 TMF1P82094 1093 aa11.79□□□□□ -0.52
SATB1-213ENST00000476178 TXNRD1Q16881 649 aa11.79□□□□□ -0.52
SATB1-213ENST00000476178 PROM2Q8N271 834 aa11.79□□□□□ -0.52
SATB1-213ENST00000476178 IP6K1Q92551 441 aa11.79□□□□□ -0.52
SATB1-213ENST00000476178 STK32BQ9NY57 414 aa11.79□□□□□ -0.52
SATB1-213ENST00000476178 USP54Q70EL1 1684 aa11.78□□□□□ -0.52
SATB1-213ENST00000476178 PEAK1Q9H792 1746 aa11.78□□□□□ -0.52
SATB1-213ENST00000476178 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
SATB1-213ENST00000476178 RREB1Q92766 1687 aa11.78□□□□□ -0.52
SATB1-213ENST00000476178 BCL9O00512 1426 aa11.77□□□□□ -0.52
SATB1-213ENST00000476178 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.52
SATB1-213ENST00000476178 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
SATB1-213ENST00000476178 ABCC6O95255 1503 aa11.76□□□□□ -0.53
SATB1-213ENST00000476178 ZBTB7AO95365 584 aa11.76□□□□□ -0.53
SATB1-213ENST00000476178 FBLN1P23142 703 aa11.76□□□□□ -0.53
SATB1-213ENST00000476178 ANKRD36BQ8N2N9 1353 aa11.76□□□□□ -0.53
SATB1-213ENST00000476178 TNS2Q63HR2 1409 aa11.76□□□□□ -0.53
SATB1-213ENST00000476178 KAT6BQ8WYB5 2073 aa11.75□□□□□ -0.53
SATB1-213ENST00000476178 SBF2Q86WG5 1849 aa11.75□□□□□ -0.53
SATB1-213ENST00000476178 SLC15A2Q16348 729 aa11.75□□□□□ -0.53
SATB1-213ENST00000476178 CDCA8Q53HL2 280 aa11.75□□□□□ -0.53
SATB1-213ENST00000476178 CCER1Q8TC90 406 aaPredicted RBP11.75□□□□□ -0.53
SATB1-213ENST00000476178 ATF5Q9Y2D1 282 aaPredicted RBP11.75□□□□□ -0.53
SATB1-213ENST00000476178 MAP3K19Q56UN5 1328 aa11.75□□□□□ -0.53
SATB1-213ENST00000476178 HOXC9P31274 260 aa11.74□□□□□ -0.53
SATB1-213ENST00000476178 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
SATB1-213ENST00000476178 PDGFDQ9GZP0 370 aaPredicted RBP11.74□□□□□ -0.53
SATB1-213ENST00000476178 GGNBP2Q9H3C7 697 aa11.74□□□□□ -0.53
SATB1-213ENST00000476178 WNK3Q9BYP7 1800 aa11.74□□□□□ -0.53
SATB1-213ENST00000476178 FYB1O15117 783 aa11.73□□□□□ -0.53
SATB1-213ENST00000476178 LTN1O94822 1766 aa11.73□□□□□ -0.53
SATB1-213ENST00000476178 RRS1Q15050 365 aaKnown RBP11.73□□□□□ -0.53
SATB1-213ENST00000476178 CARD14Q9BXL6 1004 aa11.72□□□□□ -0.53
SATB1-213ENST00000476178 ZCRB1Q8TBF4 217 aaKnown RBP11.71□□□□□ -0.53
SATB1-213ENST00000476178 RGPD3A6NKT7 1758 aaPredicted RBP11.71□□□□□ -0.54
SATB1-213ENST00000476178 RGPD4Q7Z3J3 1758 aa11.71□□□□□ -0.54
SATB1-213ENST00000476178 YY1P25490 414 aa11.7□□□□□ -0.54
SATB1-213ENST00000476178 PRIM1P49642 420 aaKnown RBP11.7□□□□□ -0.54
SATB1-213ENST00000476178 RAPGEF4Q8WZA2 1011 aa11.7□□□□□ -0.54
SATB1-213ENST00000476178 POLR3GLQ9BT43 218 aa11.7□□□□□ -0.54
SATB1-213ENST00000476178 NBPF6Q5VWK0 638 aa11.69□□□□□ -0.54
SATB1-213ENST00000476178 USHBP1Q8N6Y0 703 aa11.69□□□□□ -0.54
SATB1-213ENST00000476178 NBPF4Q96M43 638 aa11.69□□□□□ -0.54
SATB1-213ENST00000476178 MTFR1LQ9H019 292 aa11.69□□□□□ -0.54
SATB1-213ENST00000476178 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
SATB1-213ENST00000476178 HSPA5P11021 654 aaKnown RBP11.68□□□□□ -0.54
SATB1-213ENST00000476178 PTGER2P43116 358 aa11.68□□□□□ -0.54
SATB1-213ENST00000476178 EIF4G2P78344 907 aaKnown RBP eCLIP11.68□□□□□ -0.54
SATB1-213ENST00000476178 SLC27A3Q5K4L6 730 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms