RNA–Protein interactions for RNA: ENST00000476126.1

SP140-209, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-209ENST00000476126 CCER1Q8TC90 406 aaPredicted RBP9.74□□□□□ -0.85
SP140-209ENST00000476126 TERF2IPQ9NYB0 399 aa9.74□□□□□ -0.85
SP140-209ENST00000476126 A0A1W2PP64 1363 aa9.74□□□□□ -0.85
SP140-209ENST00000476126 NINLQ9Y2I6 1382 aa9.74□□□□□ -0.85
SP140-209ENST00000476126 CRB1P82279 1406 aa9.73□□□□□ -0.85
SP140-209ENST00000476126 KAT6BQ8WYB5 2073 aa9.73□□□□□ -0.85
SP140-209ENST00000476126 SLC24A1O60721 1099 aa9.73□□□□□ -0.85
SP140-209ENST00000476126 KCNH5Q8NCM2 988 aa9.73□□□□□ -0.85
SP140-209ENST00000476126 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
SP140-209ENST00000476126 ONECUT3O60422 494 aaPredicted RBP9.72□□□□□ -0.85
SP140-209ENST00000476126 TMF1P82094 1093 aa9.72□□□□□ -0.85
SP140-209ENST00000476126 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
SP140-209ENST00000476126 SLC12A5Q9H2X9 1139 aa9.72□□□□□ -0.85
SP140-209ENST00000476126 AATKQ6ZMQ8 1374 aa9.72□□□□□ -0.85
SP140-209ENST00000476126 FAM182BQ5T319 152 aa9.71□□□□□ -0.86
SP140-209ENST00000476126 TESK2Q96S53 571 aa9.71□□□□□ -0.86
SP140-209ENST00000476126 TIMELESSQ9UNS1 1208 aa9.71□□□□□ -0.86
SP140-209ENST00000476126 RREB1Q92766 1687 aa9.71□□□□□ -0.86
SP140-209ENST00000476126 CSB-PGBD3P0DP91 1061 aa9.7□□□□□ -0.86
SP140-209ENST00000476126 TOM1L2Q6ZVM7 507 aa9.7□□□□□ -0.86
SP140-209ENST00000476126 NME9Q86XW9 330 aa9.7□□□□□ -0.86
SP140-209ENST00000476126 TCP11L2Q8N4U5 519 aa9.7□□□□□ -0.86
SP140-209ENST00000476126 PUS7Q96PZ0 661 aaKnown RBP9.7□□□□□ -0.86
SP140-209ENST00000476126 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
SP140-209ENST00000476126 PEAK1Q9H792 1746 aa9.7□□□□□ -0.86
SP140-209ENST00000476126 MAP2P11137 1827 aaKnown RBP9.7□□□□□ -0.86
SP140-209ENST00000476126 OVOS2A0A0J9YW53 1432 aa9.69□□□□□ -0.86
SP140-209ENST00000476126 RGPD3A6NKT7 1758 aaPredicted RBP9.69□□□□□ -0.86
SP140-209ENST00000476126 BAG6P46379 1132 aa9.69□□□□□ -0.86
SP140-209ENST00000476126 PDE3BQ13370 1112 aa9.69□□□□□ -0.86
SP140-209ENST00000476126 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
SP140-209ENST00000476126 OVOS2Q6IE36 1432 aa9.69□□□□□ -0.86
SP140-209ENST00000476126 BARGINQ6ZT62 677 aa9.69□□□□□ -0.86
SP140-209ENST00000476126 USP31Q70CQ4 1352 aa9.69□□□□□ -0.86
SP140-209ENST00000476126 RGPD4Q7Z3J3 1758 aa9.69□□□□□ -0.86
SP140-209ENST00000476126 ANKRD36BQ8N2N9 1353 aa9.69□□□□□ -0.86
SP140-209ENST00000476126 ZRANB1Q9UGI0 708 aa9.69□□□□□ -0.86
SP140-209ENST00000476126 THRAP3Q9Y2W1 955 aaKnown RBP9.69□□□□□ -0.86
SP140-209ENST00000476126 WDR17Q8IZU2 1322 aa9.68□□□□□ -0.86
SP140-209ENST00000476126 DEFB132Q7Z7B7 95 aa9.68□□□□□ -0.86
SP140-209ENST00000476126 ARHGEF25Q86VW2 580 aa9.68□□□□□ -0.86
SP140-209ENST00000476126 OVOS2A0A0G2JMS6 1433 aa9.67□□□□□ -0.86
SP140-209ENST00000476126 FAM196AQ6ZSG2 479 aa9.66□□□□□ -0.86
SP140-209ENST00000476126 COG3Q96JB2 828 aa9.66□□□□□ -0.86
SP140-209ENST00000476126 POLR3GLQ9BT43 218 aa9.66□□□□□ -0.86
SP140-209ENST00000476126 AXIN2Q9Y2T1 843 aa9.66□□□□□ -0.86
SP140-209ENST00000476126 NHSQ6T4R5 1651 aa9.66□□□□□ -0.86
SP140-209ENST00000476126 DOT1LQ8TEK3 1739 aa9.65□□□□□ -0.86
SP140-209ENST00000476126 CCDC7Q96M83 1385 aa9.65□□□□□ -0.86
SP140-209ENST00000476126 TRIM37O94972 964 aa9.65□□□□□ -0.86
SP140-209ENST00000476126 DDB1Q16531 1140 aa9.65□□□□□ -0.86
SP140-209ENST00000476126 BTAF1O14981 1849 aa9.65□□□□□ -0.86
SP140-209ENST00000476126 SHANK3Q9BYB0 1731 aa9.65□□□□□ -0.87
SP140-209ENST00000476126 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
SP140-209ENST00000476126 NCBP3Q53F19 620 aaKnown RBP9.64□□□□□ -0.87
SP140-209ENST00000476126 DISP2A7MBM2 1401 aa9.64□□□□□ -0.87
SP140-209ENST00000476126 TNS2Q63HR2 1409 aa9.64□□□□□ -0.87
SP140-209ENST00000476126 NSD3Q9BZ95 1437 aa9.64□□□□□ -0.87
SP140-209ENST00000476126 ERBB3P21860 1342 aa9.63□□□□□ -0.87
SP140-209ENST00000476126 EIF4G2P78344 907 aaKnown RBP eCLIP9.63□□□□□ -0.87
SP140-209ENST00000476126 ANKRD24Q8TF21 1146 aa9.63□□□□□ -0.87
SP140-209ENST00000476126 CDCA7Q9BWT1 371 aaPredicted RBP9.63□□□□□ -0.87
SP140-209ENST00000476126 CARD10Q9BWT7 1032 aa9.63□□□□□ -0.87
SP140-209ENST00000476126 NLRP2Q9NX02 1062 aa9.63□□□□□ -0.87
SP140-209ENST00000476126 SMG6Q86US8 1419 aaKnown RBP9.63□□□□□ -0.87
SP140-209ENST00000476126 LRP5O75197 1615 aa9.63□□□□□ -0.87
SP140-209ENST00000476126 C11orf95C9JLR9 678 aaPredicted RBP9.62□□□□□ -0.87
SP140-209ENST00000476126 APBA3O96018 575 aa9.62□□□□□ -0.87
SP140-209ENST00000476126 AMPHP49418 695 aa9.62□□□□□ -0.87
SP140-209ENST00000476126 LTV1Q96GA3 475 aaPredicted RBP9.62□□□□□ -0.87
SP140-209ENST00000476126 GGNBP2Q9H3C7 697 aa9.62□□□□□ -0.87
SP140-209ENST00000476126 RTL1A6NKG5 1358 aa9.62□□□□□ -0.87
SP140-209ENST00000476126 PARD3Q8TEW0 1356 aa9.61□□□□□ -0.87
SP140-209ENST00000476126 MAP3K19Q56UN5 1328 aa9.6□□□□□ -0.87
SP140-209ENST00000476126 EXOC5O00471 708 aa9.6□□□□□ -0.87
SP140-209ENST00000476126 HSPA5P11021 654 aaKnown RBP9.6□□□□□ -0.87
SP140-209ENST00000476126 CACNB1Q02641 598 aaPredicted RBP9.6□□□□□ -0.87
SP140-209ENST00000476126 EZH2Q15910 746 aaKnown RBP9.6□□□□□ -0.87
SP140-209ENST00000476126 PSDA5PKW4 1024 aaPredicted RBP9.59□□□□□ -0.87
SP140-209ENST00000476126 IL2RBP14784 551 aa9.59□□□□□ -0.87
SP140-209ENST00000476126 HOXC9P31274 260 aa9.59□□□□□ -0.87
SP140-209ENST00000476126 RRS1Q15050 365 aaKnown RBP9.59□□□□□ -0.87
SP140-209ENST00000476126 IP6K1Q92551 441 aa9.59□□□□□ -0.87
SP140-209ENST00000476126 PKD1L3Q7Z443 1732 aa9.59□□□□□ -0.87
SP140-209ENST00000476126 ITGB4P16144 1822 aa9.59□□□□□ -0.88
SP140-209ENST00000476126 VIRMAQ69YN4 1812 aaKnown RBP9.59□□□□□ -0.88
SP140-209ENST00000476126 FYB1O15117 783 aa9.58□□□□□ -0.88
SP140-209ENST00000476126 FBLN1P23142 703 aa9.58□□□□□ -0.88
SP140-209ENST00000476126 FLT4P35916 1363 aa9.58□□□□□ -0.88
SP140-209ENST00000476126 CGNL1Q0VF96 1302 aa9.57□□□□□ -0.88
SP140-209ENST00000476126 MARCH10Q8NA82 808 aaPredicted RBP9.57□□□□□ -0.88
SP140-209ENST00000476126 LY75O60449 1722 aa9.56□□□□□ -0.88
SP140-209ENST00000476126 R3HDM1Q15032 1099 aaKnown RBP9.56□□□□□ -0.88
SP140-209ENST00000476126 CAMKK2Q96RR4 588 aa9.56□□□□□ -0.88
SP140-209ENST00000476126 TUBGCP6Q96RT7 1819 aa9.56□□□□□ -0.88
SP140-209ENST00000476126 MEGF6O75095 1541 aa9.56□□□□□ -0.88
SP140-209ENST00000476126 BCL9O00512 1426 aa9.56□□□□□ -0.88
SP140-209ENST00000476126 CASZ1Q86V15 1759 aa9.55□□□□□ -0.88
SP140-209ENST00000476126 KIF24Q5T7B8 1368 aa9.55□□□□□ -0.88
SP140-209ENST00000476126 PPM1GO15355 546 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms