RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 OVOS2Q6IE36 1432 aa20.83■□□□□ 0.93
SNX13-207ENST00000475800 COG3Q96JB2 828 aa20.82■□□□□ 0.92
SNX13-207ENST00000475800 CARD14Q9BXL6 1004 aa20.82■□□□□ 0.92
SNX13-207ENST00000475800 CGNL1Q0VF96 1302 aa20.81■□□□□ 0.92
SNX13-207ENST00000475800 SPATA31A5Q5VU36 1347 aa20.81■□□□□ 0.92
SNX13-207ENST00000475800 SPATA31A7Q8IWB4 1347 aa20.81■□□□□ 0.92
SNX13-207ENST00000475800 PANK3Q9H999 370 aa20.81■□□□□ 0.92
SNX13-207ENST00000475800 WASHC2AQ641Q2 1341 aa20.8■□□□□ 0.92
SNX13-207ENST00000475800 ZBTB7CA1YPR0 619 aa20.8■□□□□ 0.92
SNX13-207ENST00000475800 PSDA5PKW4 1024 aaPredicted RBP20.8■□□□□ 0.92
SNX13-207ENST00000475800 NFAT5O94916 1531 aa20.79■□□□□ 0.92
SNX13-207ENST00000475800 FYB1O15117 783 aa20.79■□□□□ 0.92
SNX13-207ENST00000475800 BAG6P46379 1132 aa20.78■□□□□ 0.92
SNX13-207ENST00000475800 EVA1CP58658 441 aa20.78■□□□□ 0.92
SNX13-207ENST00000475800 EN1Q05925 392 aaPredicted RBP20.77■□□□□ 0.92
SNX13-207ENST00000475800 ABCC6O95255 1503 aa20.77■□□□□ 0.92
SNX13-207ENST00000475800 ANKRD26Q9UPS8 1709 aa20.76■□□□□ 0.91
SNX13-207ENST00000475800 AATKQ6ZMQ8 1374 aa20.76■□□□□ 0.91
SNX13-207ENST00000475800 LMO7Q8WWI1 1683 aa20.76■□□□□ 0.91
SNX13-207ENST00000475800 NSD2O96028 1365 aa20.75■□□□□ 0.91
SNX13-207ENST00000475800 LTN1O94822 1766 aa20.75■□□□□ 0.91
SNX13-207ENST00000475800 ARHGEF25Q86VW2 580 aa20.75■□□□□ 0.91
SNX13-207ENST00000475800 GGNBP2Q9H3C7 697 aa20.75■□□□□ 0.91
SNX13-207ENST00000475800 KNSTRNQ9Y448 316 aa20.75■□□□□ 0.91
SNX13-207ENST00000475800 SPATA31A1Q5TZJ5 1347 aa20.75■□□□□ 0.91
SNX13-207ENST00000475800 SOX12O15370 315 aa20.74■□□□□ 0.91
SNX13-207ENST00000475800 COL18A1P39060 1754 aa20.74■□□□□ 0.91
SNX13-207ENST00000475800 TRIM37O94972 964 aa20.72■□□□□ 0.91
SNX13-207ENST00000475800 LARP1Q6PKG0 1096 aaKnown RBP20.72■□□□□ 0.91
SNX13-207ENST00000475800 THSD7AQ9UPZ6 1657 aa20.71■□□□□ 0.91
SNX13-207ENST00000475800 CAMTA1Q9Y6Y1 1673 aa20.7■□□□□ 0.91
SNX13-207ENST00000475800 RGPD5Q99666 1765 aa20.69■□□□□ 0.9
SNX13-207ENST00000475800 EZH2Q15910 746 aaKnown RBP20.69■□□□□ 0.9
SNX13-207ENST00000475800 RGPD1P0DJD0 1748 aa20.68■□□□□ 0.9
SNX13-207ENST00000475800 COL5A2P05997 1499 aaPredicted RBP20.68■□□□□ 0.9
SNX13-207ENST00000475800 PDE3BQ13370 1112 aa20.67■□□□□ 0.9
SNX13-207ENST00000475800 R3HDM1Q15032 1099 aaKnown RBP20.67■□□□□ 0.9
SNX13-207ENST00000475800 MAP2P11137 1827 aaKnown RBP20.67■□□□□ 0.9
SNX13-207ENST00000475800 PER1O15534 1290 aaPredicted RBP20.66■□□□□ 0.9
SNX13-207ENST00000475800 RTL1A6NKG5 1358 aa20.66■□□□□ 0.9
SNX13-207ENST00000475800 KIF24Q5T7B8 1368 aa20.66■□□□□ 0.9
SNX13-207ENST00000475800 NPC1L1Q9UHC9 1359 aa20.65■□□□□ 0.9
SNX13-207ENST00000475800 APBA3O96018 575 aa20.65■□□□□ 0.9
SNX13-207ENST00000475800 AMER1Q5JTC6 1135 aaPredicted RBP20.65■□□□□ 0.9
SNX13-207ENST00000475800 FAM196AQ6ZSG2 479 aa20.65■□□□□ 0.9
SNX13-207ENST00000475800 MAP3K19Q56UN5 1328 aa20.64■□□□□ 0.89
SNX13-207ENST00000475800 TCP11L2Q8N4U5 519 aa20.64■□□□□ 0.89
SNX13-207ENST00000475800 IP6K1Q92551 441 aa20.64■□□□□ 0.89
SNX13-207ENST00000475800 AMPHP49418 695 aa20.63■□□□□ 0.89
SNX13-207ENST00000475800 AXIN2Q9Y2T1 843 aa20.63■□□□□ 0.89
SNX13-207ENST00000475800 TNS1Q9HBL0 1735 aaKnown RBP20.63■□□□□ 0.89
SNX13-207ENST00000475800 WDR17Q8IZU2 1322 aa20.62■□□□□ 0.89
SNX13-207ENST00000475800 MORC1Q86VD1 984 aa20.62■□□□□ 0.89
SNX13-207ENST00000475800 CRB1P82279 1406 aa20.61■□□□□ 0.89
SNX13-207ENST00000475800 FAM208AQ9UK61 1670 aaKnown RBP20.61■□□□□ 0.89
SNX13-207ENST00000475800 BARGINQ6ZT62 677 aa20.61■□□□□ 0.89
SNX13-207ENST00000475800 HOXC9P31274 260 aa20.6■□□□□ 0.89
SNX13-207ENST00000475800 RRS1Q15050 365 aaKnown RBP20.6■□□□□ 0.89
SNX13-207ENST00000475800 THRAP3Q9Y2W1 955 aaKnown RBP20.6■□□□□ 0.89
SNX13-207ENST00000475800 FLT4P35916 1363 aa20.59■□□□□ 0.89
SNX13-207ENST00000475800 ERBB3P21860 1342 aa20.59■□□□□ 0.89
SNX13-207ENST00000475800 CSB-PGBD3P0DP91 1061 aa20.59■□□□□ 0.89
SNX13-207ENST00000475800 FBLN1P23142 703 aa20.59■□□□□ 0.89
SNX13-207ENST00000475800 TOM1L2Q6ZVM7 507 aa20.58■□□□□ 0.89
SNX13-207ENST00000475800 CAMKK2Q96RR4 588 aa20.58■□□□□ 0.89
SNX13-207ENST00000475800 ANKRD24Q8TF21 1146 aa20.57■□□□□ 0.88
SNX13-207ENST00000475800 PEAK1Q9H792 1746 aa20.56■□□□□ 0.88
SNX13-207ENST00000475800 SMG6Q86US8 1419 aaKnown RBP20.56■□□□□ 0.88
SNX13-207ENST00000475800 CARD10Q9BWT7 1032 aa20.56■□□□□ 0.88
SNX13-207ENST00000475800 INSRP06213 1382 aa20.56■□□□□ 0.88
SNX13-207ENST00000475800 TNNT2P45379 298 aaPredicted RBP20.55■□□□□ 0.88
SNX13-207ENST00000475800 CC2D1BQ5T0F9 858 aaKnown RBP20.55■□□□□ 0.88
SNX13-207ENST00000475800 POLKQ9UBT6 870 aa20.55■□□□□ 0.88
SNX13-207ENST00000475800 EMILIN1Q9Y6C2 1016 aa20.55■□□□□ 0.88
SNX13-207ENST00000475800 DISP2A7MBM2 1401 aa20.54■□□□□ 0.88
SNX13-207ENST00000475800 LRP5O75197 1615 aa20.54■□□□□ 0.88
SNX13-207ENST00000475800 WNK3Q9BYP7 1800 aa20.53■□□□□ 0.88
SNX13-207ENST00000475800 ZNF316A6NFI3 1004 aaPredicted RBP20.53■□□□□ 0.88
SNX13-207ENST00000475800 PPM1GO15355 546 aaPredicted RBP20.52■□□□□ 0.88
SNX13-207ENST00000475800 CDCA7Q9BWT1 371 aaPredicted RBP20.52■□□□□ 0.88
SNX13-207ENST00000475800 NLRP2Q9NX02 1062 aa20.52■□□□□ 0.88
SNX13-207ENST00000475800 DDX10Q13206 875 aaKnown RBP20.51■□□□□ 0.87
SNX13-207ENST00000475800 PARP4Q9UKK3 1724 aaKnown RBP20.5■□□□□ 0.87
SNX13-207ENST00000475800 DDB1Q16531 1140 aa20.5■□□□□ 0.87
SNX13-207ENST00000475800 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
SNX13-207ENST00000475800 LTV1Q96GA3 475 aaPredicted RBP20.5■□□□□ 0.87
SNX13-207ENST00000475800 RGPD2P0DJD1 1756 aa20.49■□□□□ 0.87
SNX13-207ENST00000475800 PTF1AQ7RTS3 328 aa20.47■□□□□ 0.87
SNX13-207ENST00000475800 NBPF14Q5TI25 921 aa20.46■□□□□ 0.87
SNX13-207ENST00000475800 NUP188Q5SRE5 1749 aa20.46■□□□□ 0.87
SNX13-207ENST00000475800 PARD3Q8TEW0 1356 aa20.46■□□□□ 0.87
SNX13-207ENST00000475800 LRRC37A3O60309 1634 aa20.45■□□□□ 0.87
SNX13-207ENST00000475800 OVOS2A0A0G2JMS6 1433 aa20.45■□□□□ 0.86
SNX13-207ENST00000475800 RREB1Q92766 1687 aa20.45■□□□□ 0.86
SNX13-207ENST00000475800 CNGB1Q14028 1251 aaPredicted RBP20.44■□□□□ 0.86
SNX13-207ENST00000475800 IL2RBP14784 551 aa20.43■□□□□ 0.86
SNX13-207ENST00000475800 MTHFSP49914 203 aa20.43■□□□□ 0.86
SNX13-207ENST00000475800 MARCH10Q8NA82 808 aaPredicted RBP20.43■□□□□ 0.86
SNX13-207ENST00000475800 NBPF6Q5VWK0 638 aa20.42■□□□□ 0.86
SNX13-207ENST00000475800 NBPF4Q96M43 638 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms