RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 EMILIN1Q9Y6C2 1016 aa20.42■□□□□ 0.86
MCF2L-224ENST00000475524 CCER2I3L3R5 266 aa20.41■□□□□ 0.86
MCF2L-224ENST00000475524 HOXC9P31274 260 aa20.41■□□□□ 0.86
MCF2L-224ENST00000475524 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.41■□□□□ 0.86
MCF2L-224ENST00000475524 FBLN1P23142 703 aa20.4■□□□□ 0.86
MCF2L-224ENST00000475524 NRAPQ86VF7 1730 aa20.4■□□□□ 0.86
MCF2L-224ENST00000475524 SLIT2O94813 1529 aa20.39■□□□□ 0.85
MCF2L-224ENST00000475524 CAMTA1Q9Y6Y1 1673 aa20.38■□□□□ 0.85
MCF2L-224ENST00000475524 NUTM2BA6NNL0 878 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-224ENST00000475524 NUTM2EB1AL46 878 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-224ENST00000475524 PLEKHG5O94827 1062 aa20.38■□□□□ 0.85
MCF2L-224ENST00000475524 NUTM2AQ8IVF1 878 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-224ENST00000475524 RGPD1P0DJD0 1748 aa20.37■□□□□ 0.85
MCF2L-224ENST00000475524 FAM83GA6ND36 823 aa20.37■□□□□ 0.85
MCF2L-224ENST00000475524 COL5A2P05997 1499 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-224ENST00000475524 ERBB3P21860 1342 aa20.35■□□□□ 0.85
MCF2L-224ENST00000475524 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
MCF2L-224ENST00000475524 ADAMTS2O95450 1211 aa20.35■□□□□ 0.85
MCF2L-224ENST00000475524 MIER1Q8N108 512 aa20.35■□□□□ 0.85
MCF2L-224ENST00000475524 CHRNA2Q15822 529 aa20.34■□□□□ 0.85
MCF2L-224ENST00000475524 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
MCF2L-224ENST00000475524 FNBP4Q8N3X1 1017 aaPredicted RBP20.34■□□□□ 0.85
MCF2L-224ENST00000475524 DIAPH1O60610 1272 aaKnown RBP20.33■□□□□ 0.85
MCF2L-224ENST00000475524 AXIN2Q9Y2T1 843 aa20.33■□□□□ 0.85
MCF2L-224ENST00000475524 NCAPD2Q15021 1401 aa20.33■□□□□ 0.84
MCF2L-224ENST00000475524 NUDCQ9Y266 331 aa20.32■□□□□ 0.84
MCF2L-224ENST00000475524 WDR17Q8IZU2 1322 aa20.31■□□□□ 0.84
MCF2L-224ENST00000475524 ZBTB7CA1YPR0 619 aa20.31■□□□□ 0.84
MCF2L-224ENST00000475524 IL13P35225 146 aa20.31■□□□□ 0.84
MCF2L-224ENST00000475524 MEX3CQ5U5Q3 659 aaKnown RBP20.31■□□□□ 0.84
MCF2L-224ENST00000475524 MRS2Q9HD23 443 aa20.31■□□□□ 0.84
MCF2L-224ENST00000475524 EIF4A2Q14240 407 aaKnown RBP20.3■□□□□ 0.84
MCF2L-224ENST00000475524 ANKRD24Q8TF21 1146 aa20.3■□□□□ 0.84
MCF2L-224ENST00000475524 BTG4Q9NY30 223 aa20.3■□□□□ 0.84
MCF2L-224ENST00000475524 PLEKHG2Q9H7P9 1386 aa20.3■□□□□ 0.84
MCF2L-224ENST00000475524 RGPD2P0DJD1 1756 aa20.29■□□□□ 0.84
MCF2L-224ENST00000475524 ILDR1Q86SU0 546 aaPredicted RBP20.29■□□□□ 0.84
MCF2L-224ENST00000475524 NGLY1Q96IV0 654 aa20.29■□□□□ 0.84
MCF2L-224ENST00000475524 C8orf37Q96NL8 207 aa20.29■□□□□ 0.84
MCF2L-224ENST00000475524 BCL9LQ86UU0 1499 aa20.29■□□□□ 0.84
MCF2L-224ENST00000475524 IGSF1Q8N6C5 1336 aa20.28■□□□□ 0.84
MCF2L-224ENST00000475524 CRB1P82279 1406 aa20.28■□□□□ 0.84
MCF2L-224ENST00000475524 UNC5CLQ8IV45 518 aa20.27■□□□□ 0.84
MCF2L-224ENST00000475524 KDRP35968 1356 aa20.26■□□□□ 0.83
MCF2L-224ENST00000475524 WNK3Q9BYP7 1800 aa20.25■□□□□ 0.83
MCF2L-224ENST00000475524 EVA1CP58658 441 aa20.25■□□□□ 0.83
MCF2L-224ENST00000475524 CCDC184Q52MB2 194 aa20.25■□□□□ 0.83
MCF2L-224ENST00000475524 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
MCF2L-224ENST00000475524 CARD10Q9BWT7 1032 aa20.24■□□□□ 0.83
MCF2L-224ENST00000475524 AFF2P51816 1311 aa20.24■□□□□ 0.83
MCF2L-224ENST00000475524 CSB-PGBD3P0DP91 1061 aa20.23■□□□□ 0.83
MCF2L-224ENST00000475524 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
MCF2L-224ENST00000475524 EYA1Q99502 592 aa20.23■□□□□ 0.83
MCF2L-224ENST00000475524 USP21Q9UK80 565 aa20.23■□□□□ 0.83
MCF2L-224ENST00000475524 PARP4Q9UKK3 1724 aaKnown RBP20.22■□□□□ 0.83
MCF2L-224ENST00000475524 ATRNO75882 1429 aa20.22■□□□□ 0.83
MCF2L-224ENST00000475524 VPS72Q15906 364 aa20.22■□□□□ 0.83
MCF2L-224ENST00000475524 LTV1Q96GA3 475 aaPredicted RBP20.22■□□□□ 0.83
MCF2L-224ENST00000475524 NBPF6Q5VWK0 638 aa20.21■□□□□ 0.83
MCF2L-224ENST00000475524 TOM1L2Q6ZVM7 507 aa20.21■□□□□ 0.83
MCF2L-224ENST00000475524 NBPF4Q96M43 638 aa20.21■□□□□ 0.83
MCF2L-224ENST00000475524 PNNQ9H307 717 aaKnown RBP20.21■□□□□ 0.83
MCF2L-224ENST00000475524 STRN4Q9NRL3 753 aa20.21■□□□□ 0.83
MCF2L-224ENST00000475524 THRAP3Q9Y2W1 955 aaKnown RBP20.21■□□□□ 0.83
MCF2L-224ENST00000475524 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
MCF2L-224ENST00000475524 FCHSD2O94868 740 aa20.2■□□□□ 0.82
MCF2L-224ENST00000475524 ZNF772Q68DY9 489 aaPredicted RBP20.2■□□□□ 0.82
MCF2L-224ENST00000475524 LARP1Q6PKG0 1096 aaKnown RBP20.2■□□□□ 0.82
MCF2L-224ENST00000475524 NLRP2Q9NX02 1062 aa20.2■□□□□ 0.82
MCF2L-224ENST00000475524 SPATA31A5Q5VU36 1347 aa20.2■□□□□ 0.82
MCF2L-224ENST00000475524 SPATA31A7Q8IWB4 1347 aa20.2■□□□□ 0.82
MCF2L-224ENST00000475524 U2AF1L5P0DN76 240 aaPredicted RBP20.19■□□□□ 0.82
MCF2L-224ENST00000475524 U2AF1Q01081 240 aaKnown RBP eCLIP20.19■□□□□ 0.82
MCF2L-224ENST00000475524 TRPC5Q9UL62 973 aaPredicted RBP20.19■□□□□ 0.82
MCF2L-224ENST00000475524 SPATA31A1Q5TZJ5 1347 aa20.19■□□□□ 0.82
MCF2L-224ENST00000475524 PKD1L3Q7Z443 1732 aa20.17■□□□□ 0.82
MCF2L-224ENST00000475524 CDCA7Q9BWT1 371 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-224ENST00000475524 SULT6B1Q6IMI4 303 aa20.16■□□□□ 0.82
MCF2L-224ENST00000475524 BARGINQ6ZT62 677 aa20.16■□□□□ 0.82
MCF2L-224ENST00000475524 TCP11L2Q8N4U5 519 aa20.16■□□□□ 0.82
MCF2L-224ENST00000475524 RSPH6AQ9H0K4 717 aa20.16■□□□□ 0.82
MCF2L-224ENST00000475524 DISP2A7MBM2 1401 aa20.16■□□□□ 0.82
MCF2L-224ENST00000475524 GLI3P10071 1580 aa20.16■□□□□ 0.82
MCF2L-224ENST00000475524 ADAMTS8Q9UP79 889 aa20.15■□□□□ 0.82
MCF2L-224ENST00000475524 THSD7AQ9UPZ6 1657 aa20.14■□□□□ 0.81
MCF2L-224ENST00000475524 OVOS2A0A0G2JMS6 1433 aa20.13■□□□□ 0.81
MCF2L-224ENST00000475524 RAPGEF4Q8WZA2 1011 aa20.13■□□□□ 0.81
MCF2L-224ENST00000475524 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.13■□□□□ 0.812e-13■■□□□ 11.4
MCF2L-224ENST00000475524 MEGF6O75095 1541 aa20.12■□□□□ 0.81
MCF2L-224ENST00000475524 NEFMP07197 916 aa20.12■□□□□ 0.81
MCF2L-224ENST00000475524 HMOX1P09601 288 aa20.12■□□□□ 0.81
MCF2L-224ENST00000475524 IL2RBP14784 551 aa20.12■□□□□ 0.81
MCF2L-224ENST00000475524 AEBP1Q8IUX7 1158 aa20.12■□□□□ 0.81
MCF2L-224ENST00000475524 GJD4Q96KN9 370 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-224ENST00000475524 USHBP1Q8N6Y0 703 aa20.11■□□□□ 0.81
MCF2L-224ENST00000475524 RUNDC1Q96C34 613 aa20.11■□□□□ 0.81
MCF2L-224ENST00000475524 PLEKHF1Q96S99 279 aa20.11■□□□□ 0.81
MCF2L-224ENST00000475524 QTRT2Q9H974 415 aaKnown RBP20.11■□□□□ 0.81
MCF2L-224ENST00000475524 TATP17735 454 aaPredicted RBP20.1■□□□□ 0.81
MCF2L-224ENST00000475524 PRKAR2BP31323 418 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms