RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 NUP188Q5SRE5 1749 aa17.69■□□□□ 0.42
TTC38-206ENST00000475467 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
TTC38-206ENST00000475467 CARD10Q9BWT7 1032 aa17.68■□□□□ 0.42
TTC38-206ENST00000475467 TTC21BQ7Z4L5 1316 aa17.68■□□□□ 0.42
TTC38-206ENST00000475467 ABCC6O95255 1503 aa17.67■□□□□ 0.42
TTC38-206ENST00000475467 NINLQ9Y2I6 1382 aa17.67■□□□□ 0.42
TTC38-206ENST00000475467 PPP1R1BQ9UD71 204 aaPredicted RBP17.67■□□□□ 0.42
TTC38-206ENST00000475467 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
TTC38-206ENST00000475467 CCDC7Q96M83 1385 aa17.66■□□□□ 0.42
TTC38-206ENST00000475467 CPSF1Q10570 1443 aaKnown RBP17.66■□□□□ 0.42
TTC38-206ENST00000475467 PEAK1Q9H792 1746 aa17.65■□□□□ 0.42
TTC38-206ENST00000475467 ZBTB7CA1YPR0 619 aa17.65■□□□□ 0.42
TTC38-206ENST00000475467 COL18A1P39060 1754 aa17.65■□□□□ 0.42
TTC38-206ENST00000475467 SBNO2Q9Y2G9 1366 aa17.65■□□□□ 0.42
TTC38-206ENST00000475467 EXOC5O00471 708 aa17.64■□□□□ 0.41
TTC38-206ENST00000475467 PIK3C2AO00443 1686 aa17.64■□□□□ 0.41
TTC38-206ENST00000475467 SBF2Q86WG5 1849 aa17.63■□□□□ 0.41
TTC38-206ENST00000475467 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
TTC38-206ENST00000475467 AXIN2Q9Y2T1 843 aa17.63■□□□□ 0.41
TTC38-206ENST00000475467 LRRC37A3O60309 1634 aa17.62■□□□□ 0.41
TTC38-206ENST00000475467 KTN1Q86UP2 1357 aaKnown RBP17.62■□□□□ 0.41
TTC38-206ENST00000475467 AKAP12Q02952 1782 aa17.61■□□□□ 0.41
TTC38-206ENST00000475467 SLC24A1O60721 1099 aa17.61■□□□□ 0.41
TTC38-206ENST00000475467 MARCH10Q8NA82 808 aaPredicted RBP17.61■□□□□ 0.41
TTC38-206ENST00000475467 PUS7Q96PZ0 661 aaKnown RBP17.61■□□□□ 0.41
TTC38-206ENST00000475467 USP31Q70CQ4 1352 aa17.61■□□□□ 0.41
TTC38-206ENST00000475467 YY1P25490 414 aa17.59■□□□□ 0.41
TTC38-206ENST00000475467 WNK3Q9BYP7 1800 aa17.58■□□□□ 0.41
TTC38-206ENST00000475467 STK32BQ9NY57 414 aa17.58■□□□□ 0.4
TTC38-206ENST00000475467 TXNRD1Q16881 649 aa17.56■□□□□ 0.4
TTC38-206ENST00000475467 HDGFL2Q7Z4V5 671 aaPredicted RBP17.56■□□□□ 0.4
TTC38-206ENST00000475467 NFAT5O94916 1531 aa17.56■□□□□ 0.4
TTC38-206ENST00000475467 TNS2Q63HR2 1409 aa17.55■□□□□ 0.4
TTC38-206ENST00000475467 PROM2Q8N271 834 aa17.55■□□□□ 0.4
TTC38-206ENST00000475467 SIN3AQ96ST3 1273 aa17.55■□□□□ 0.4
TTC38-206ENST00000475467 TERF2IPQ9NYB0 399 aa17.55■□□□□ 0.4
TTC38-206ENST00000475467 ERBB3P21860 1342 aa17.54■□□□□ 0.4
TTC38-206ENST00000475467 NEUROD1Q13562 356 aa17.54■□□□□ 0.4
TTC38-206ENST00000475467 SLC15A2Q16348 729 aa17.54■□□□□ 0.4
TTC38-206ENST00000475467 USP54Q70EL1 1684 aa17.54■□□□□ 0.4
TTC38-206ENST00000475467 SOX12O15370 315 aa17.53■□□□□ 0.4
TTC38-206ENST00000475467 IL2RBP14784 551 aa17.53■□□□□ 0.4
TTC38-206ENST00000475467 CARD11Q9BXL7 1154 aa17.53■□□□□ 0.4
TTC38-206ENST00000475467 ANO8Q9HCE9 1232 aaPredicted RBP17.53■□□□□ 0.4
TTC38-206ENST00000475467 MON2Q7Z3U7 1717 aa17.52■□□□□ 0.4
TTC38-206ENST00000475467 MTFR1LQ9H019 292 aa17.52■□□□□ 0.4
TTC38-206ENST00000475467 RGPD5Q99666 1765 aa17.52■□□□□ 0.4
TTC38-206ENST00000475467 CASZ1Q86V15 1759 aa17.51■□□□□ 0.39
TTC38-206ENST00000475467 EDC4Q6P2E9 1401 aaKnown RBP17.51■□□□□ 0.39
TTC38-206ENST00000475467 NLRP2Q9NX02 1062 aa17.51■□□□□ 0.39
TTC38-206ENST00000475467 HMGB2P26583 209 aaKnown RBP17.5■□□□□ 0.39
TTC38-206ENST00000475467 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.5■□□□□ 0.39
TTC38-206ENST00000475467 TMC1Q8TDI8 760 aa17.49■□□□□ 0.39
TTC38-206ENST00000475467 PTGER2P43116 358 aa17.48■□□□□ 0.39
TTC38-206ENST00000475467 PTF1AQ7RTS3 328 aa17.48■□□□□ 0.39
TTC38-206ENST00000475467 NHSQ6T4R5 1651 aa17.48■□□□□ 0.39
TTC38-206ENST00000475467 ZBTB7AO95365 584 aa17.47■□□□□ 0.39
TTC38-206ENST00000475467 ANKRD24Q8TF21 1146 aa17.47■□□□□ 0.39
TTC38-206ENST00000475467 CD163L1Q9NR16 1453 aa17.46■□□□□ 0.39
TTC38-206ENST00000475467 SLC27A3Q5K4L6 730 aa17.46■□□□□ 0.39
TTC38-206ENST00000475467 NME9Q86XW9 330 aa17.46■□□□□ 0.39
TTC38-206ENST00000475467 SLC16A10Q8TF71 515 aa17.46■□□□□ 0.39
TTC38-206ENST00000475467 IP6K1Q92551 441 aa17.46■□□□□ 0.39
TTC38-206ENST00000475467 SYT17Q9BSW7 474 aa17.45■□□□□ 0.38
TTC38-206ENST00000475467 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
TTC38-206ENST00000475467 TONSLQ96HA7 1378 aa17.44■□□□□ 0.38
TTC38-206ENST00000475467 MAP3K5Q99683 1374 aa17.44■□□□□ 0.38
TTC38-206ENST00000475467 LTN1O94822 1766 aa17.44■□□□□ 0.38
TTC38-206ENST00000475467 SGIP1Q9BQI5 828 aa17.43■□□□□ 0.38
TTC38-206ENST00000475467 ATF5Q9Y2D1 282 aaPredicted RBP17.43■□□□□ 0.38
TTC38-206ENST00000475467 KAT6BQ8WYB5 2073 aa17.43■□□□□ 0.38
TTC38-206ENST00000475467 FAM208AQ9UK61 1670 aaKnown RBP17.42■□□□□ 0.38
TTC38-206ENST00000475467 A0A1W2PP64 1363 aa17.42■□□□□ 0.38
TTC38-206ENST00000475467 COG3Q96JB2 828 aa17.42■□□□□ 0.38
TTC38-206ENST00000475467 ACSBG1Q96GR2 724 aa17.41■□□□□ 0.38
TTC38-206ENST00000475467 ARXQ96QS3 562 aa17.41■□□□□ 0.38
TTC38-206ENST00000475467 FHDC1Q9C0D6 1143 aaPredicted RBP17.41■□□□□ 0.38
TTC38-206ENST00000475467 PDGFDQ9GZP0 370 aaPredicted RBP17.41■□□□□ 0.38
TTC38-206ENST00000475467 CGNL1Q0VF96 1302 aa17.41■□□□□ 0.38
TTC38-206ENST00000475467 MYOM1P52179 1685 aa17.39■□□□□ 0.37
TTC38-206ENST00000475467 POLD1P28340 1107 aa17.38■□□□□ 0.37
TTC38-206ENST00000475467 BTAF1O14981 1849 aa17.37■□□□□ 0.37
TTC38-206ENST00000475467 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
TTC38-206ENST00000475467 AMPHP49418 695 aa17.37■□□□□ 0.37
TTC38-206ENST00000475467 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
TTC38-206ENST00000475467 AKT1S1Q96B36 256 aa17.36■□□□□ 0.37
TTC38-206ENST00000475467 CHD4Q14839 1912 aa17.36■□□□□ 0.37
TTC38-206ENST00000475467 RTL1A6NKG5 1358 aa17.36■□□□□ 0.37
TTC38-206ENST00000475467 ANKRD36BQ8N2N9 1353 aa17.36■□□□□ 0.37
TTC38-206ENST00000475467 CDCA8Q53HL2 280 aa17.35■□□□□ 0.37
TTC38-206ENST00000475467 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
TTC38-206ENST00000475467 TESK2Q96S53 571 aa17.35■□□□□ 0.37
TTC38-206ENST00000475467 QSER1Q2KHR3 1735 aa17.35■□□□□ 0.37
TTC38-206ENST00000475467 HOXC9P31274 260 aa17.34■□□□□ 0.37
TTC38-206ENST00000475467 LRRC4BQ9NT99 713 aa17.34■□□□□ 0.37
TTC38-206ENST00000475467 KIF24Q5T7B8 1368 aa17.33■□□□□ 0.36
TTC38-206ENST00000475467 MAP3K19Q56UN5 1328 aa17.33■□□□□ 0.36
TTC38-206ENST00000475467 ST20-MTHFSA0A0A6YYL1 179 aa17.33■□□□□ 0.36
TTC38-206ENST00000475467 ZNF784Q8NCA9 323 aaPredicted RBP17.33■□□□□ 0.36
TTC38-206ENST00000475467 TFCP2L1Q9NZI6 479 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms