RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 ADGRB1O14514 1584 aa9.94□□□□□ -0.82
LSAMP-204ENST00000475403 MAP3K5Q99683 1374 aa9.94□□□□□ -0.82
LSAMP-204ENST00000475403 MPHOSPH9Q99550 1183 aa9.94□□□□□ -0.82
LSAMP-204ENST00000475403 ACEP12821 1306 aa9.93□□□□□ -0.82
LSAMP-204ENST00000475403 POLD1P28340 1107 aa9.93□□□□□ -0.82
LSAMP-204ENST00000475403 PTF1AQ7RTS3 328 aa9.93□□□□□ -0.82
LSAMP-204ENST00000475403 NLRP13Q86W25 1043 aa9.93□□□□□ -0.82
LSAMP-204ENST00000475403 PROM2Q8N271 834 aa9.93□□□□□ -0.82
LSAMP-204ENST00000475403 WNK3Q9BYP7 1800 aa9.93□□□□□ -0.82
LSAMP-204ENST00000475403 GOLGB1Q14789 3259 aaKnown RBP9.93□□□□□ -0.82
LSAMP-204ENST00000475403 TOPAZ1Q8N9V7 1692 aa9.93□□□□□ -0.82
LSAMP-204ENST00000475403 USP19O94966 1318 aa9.92□□□□□ -0.82
LSAMP-204ENST00000475403 GCP02774 474 aa9.92□□□□□ -0.82
LSAMP-204ENST00000475403 SGIP1Q9BQI5 828 aa9.92□□□□□ -0.82
LSAMP-204ENST00000475403 CDCA7Q9BWT1 371 aaPredicted RBP9.92□□□□□ -0.82
LSAMP-204ENST00000475403 POLR3AO14802 1390 aaPredicted RBP9.91□□□□□ -0.82
LSAMP-204ENST00000475403 SHANK3Q9BYB0 1731 aa9.91□□□□□ -0.82
LSAMP-204ENST00000475403 CSB-PGBD3P0DP91 1061 aa9.91□□□□□ -0.82
LSAMP-204ENST00000475403 MARCH10Q8NA82 808 aaPredicted RBP9.91□□□□□ -0.82
LSAMP-204ENST00000475403 ARHGEF28Q8N1W1 1705 aaKnown RBP9.9□□□□□ -0.82
LSAMP-204ENST00000475403 AATKQ6ZMQ8 1374 aa9.9□□□□□ -0.82
LSAMP-204ENST00000475403 CDK19Q9BWU1 502 aa9.9□□□□□ -0.82
LSAMP-204ENST00000475403 CCDC61Q9Y6R9 512 aa9.9□□□□□ -0.82
LSAMP-204ENST00000475403 BCL9O00512 1426 aa9.9□□□□□ -0.83
LSAMP-204ENST00000475403 GPBP1L1Q9HC44 474 aaPredicted RBP9.89□□□□□ -0.83
LSAMP-204ENST00000475403 KDM2AQ9Y2K7 1162 aa9.89□□□□□ -0.83
LSAMP-204ENST00000475403 WDR17Q8IZU2 1322 aa9.88□□□□□ -0.83
LSAMP-204ENST00000475403 EXOC5O00471 708 aa9.88□□□□□ -0.83
LSAMP-204ENST00000475403 GRIN3BO60391 1043 aa9.88□□□□□ -0.83
LSAMP-204ENST00000475403 HSPA6P17066 643 aa9.88□□□□□ -0.83
LSAMP-204ENST00000475403 ATP10DQ9P241 1426 aa9.88□□□□□ -0.83
LSAMP-204ENST00000475403 BRD4O60885 1362 aaPredicted RBP9.88□□□□□ -0.83
LSAMP-204ENST00000475403 NHSQ6T4R5 1651 aa9.87□□□□□ -0.83
LSAMP-204ENST00000475403 NLRP6P59044 892 aa9.87□□□□□ -0.83
LSAMP-204ENST00000475403 SRPK2P78362 688 aaKnown RBP9.87□□□□□ -0.83
LSAMP-204ENST00000475403 ACSBG1Q96GR2 724 aa9.87□□□□□ -0.83
LSAMP-204ENST00000475403 PAPPAQ13219 1627 aa9.86□□□□□ -0.83
LSAMP-204ENST00000475403 PLEKHG3A1L390 1219 aa9.86□□□□□ -0.83
LSAMP-204ENST00000475403 TNS2Q63HR2 1409 aa9.86□□□□□ -0.83
LSAMP-204ENST00000475403 PPIP5K1Q6PFW1 1433 aa9.86□□□□□ -0.83
LSAMP-204ENST00000475403 DCAF11Q8TEB1 546 aa9.86□□□□□ -0.83
LSAMP-204ENST00000475403 ZNF526Q8TF50 670 aaPredicted RBP9.86□□□□□ -0.83
LSAMP-204ENST00000475403 KAT6BQ8WYB5 2073 aa9.86□□□□□ -0.83
LSAMP-204ENST00000475403 CPSF1Q10570 1443 aaKnown RBP9.85□□□□□ -0.83
LSAMP-204ENST00000475403 ZNF827Q17R98 1081 aa9.85□□□□□ -0.83
LSAMP-204ENST00000475403 NLGN2Q8NFZ4 835 aa9.85□□□□□ -0.83
LSAMP-204ENST00000475403 SLC16A10Q8TF71 515 aa9.85□□□□□ -0.83
LSAMP-204ENST00000475403 SLIT3O75094 1523 aa9.84□□□□□ -0.83
LSAMP-204ENST00000475403 SOX12O15370 315 aa9.84□□□□□ -0.83
LSAMP-204ENST00000475403 CARD10Q9BWT7 1032 aa9.84□□□□□ -0.83
LSAMP-204ENST00000475403 TFCP2L1Q9NZI6 479 aa9.84□□□□□ -0.83
LSAMP-204ENST00000475403 USP6P35125 1406 aa9.83□□□□□ -0.84
LSAMP-204ENST00000475403 MSH5O43196 834 aa9.83□□□□□ -0.84
LSAMP-204ENST00000475403 CENPBP07199 599 aaPredicted RBP9.83□□□□□ -0.84
LSAMP-204ENST00000475403 YBX3P16989 372 aaKnown RBP eCLIP9.83□□□□□ -0.84
LSAMP-204ENST00000475403 BTAF1O14981 1849 aa9.83□□□□□ -0.84
LSAMP-204ENST00000475403 CCDC7Q96M83 1385 aa9.83□□□□□ -0.84
LSAMP-204ENST00000475403 ABCC6O95255 1503 aa9.82□□□□□ -0.84
LSAMP-204ENST00000475403 QSER1Q2KHR3 1735 aa9.82□□□□□ -0.84
LSAMP-204ENST00000475403 AXIN2Q9Y2T1 843 aa9.82□□□□□ -0.84
LSAMP-204ENST00000475403 QRICH2Q9H0J4 1663 aa9.82□□□□□ -0.84
LSAMP-204ENST00000475403 TRPM1Q7Z4N2 1603 aa9.82□□□□□ -0.84
LSAMP-204ENST00000475403 COL18A1P39060 1754 aa9.81□□□□□ -0.84
LSAMP-204ENST00000475403 RGPD5Q99666 1765 aa9.81□□□□□ -0.84
LSAMP-204ENST00000475403 CAPN15O75808 1086 aa9.81□□□□□ -0.84
LSAMP-204ENST00000475403 KCNH5Q8NCM2 988 aa9.81□□□□□ -0.84
LSAMP-204ENST00000475403 STAC3Q96MF2 364 aa9.81□□□□□ -0.84
LSAMP-204ENST00000475403 PNPLA7Q6ZV29 1317 aa9.81□□□□□ -0.84
LSAMP-204ENST00000475403 PIK3C2AO00443 1686 aa9.8□□□□□ -0.84
LSAMP-204ENST00000475403 SLC27A3Q5K4L6 730 aa9.8□□□□□ -0.84
LSAMP-204ENST00000475403 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
LSAMP-204ENST00000475403 APLP1P51693 650 aa9.79□□□□□ -0.84
LSAMP-204ENST00000475403 AKT1S1Q96B36 256 aa9.79□□□□□ -0.84
LSAMP-204ENST00000475403 LRRC4BQ9NT99 713 aa9.79□□□□□ -0.84
LSAMP-204ENST00000475403 NLRP2Q9NX02 1062 aa9.79□□□□□ -0.84
LSAMP-204ENST00000475403 TUBGCP6Q96RT7 1819 aa9.78□□□□□ -0.84
LSAMP-204ENST00000475403 IL2RBP14784 551 aa9.78□□□□□ -0.84
LSAMP-204ENST00000475403 ARHGEF25Q86VW2 580 aa9.78□□□□□ -0.84
LSAMP-204ENST00000475403 SYTL4Q96C24 671 aaPredicted RBP9.78□□□□□ -0.84
LSAMP-204ENST00000475403 CABP1Q9NZU7 370 aa9.78□□□□□ -0.84
LSAMP-204ENST00000475403 COL24A1Q17RW2 1714 aa9.78□□□□□ -0.84
LSAMP-204ENST00000475403 CENPJQ9HC77 1338 aaPredicted RBP9.77□□□□□ -0.85
LSAMP-204ENST00000475403 ADCY9O60503 1353 aa9.76□□□□□ -0.85
LSAMP-204ENST00000475403 MSL1Q68DK7 614 aa9.76□□□□□ -0.85
LSAMP-204ENST00000475403 KCNQ4P56696 695 aa9.75□□□□□ -0.85
LSAMP-204ENST00000475403 NFAT5O94916 1531 aa9.74□□□□□ -0.85
LSAMP-204ENST00000475403 NEUROD1Q13562 356 aa9.74□□□□□ -0.85
LSAMP-204ENST00000475403 DDX54Q8TDD1 881 aaKnown RBP9.74□□□□□ -0.85
LSAMP-204ENST00000475403 CCNL1Q9UK58 526 aaPredicted RBP9.74□□□□□ -0.85
LSAMP-204ENST00000475403 WWC3Q9ULE0 1092 aa9.74□□□□□ -0.85
LSAMP-204ENST00000475403 CD2APQ9Y5K6 639 aa9.74□□□□□ -0.85
LSAMP-204ENST00000475403 ERBB3P21860 1342 aa9.74□□□□□ -0.85
LSAMP-204ENST00000475403 KIAA1210Q9ULL0 1709 aa9.73□□□□□ -0.85
LSAMP-204ENST00000475403 TNS4Q8IZW8 715 aa9.73□□□□□ -0.85
LSAMP-204ENST00000475403 TTC21BQ7Z4L5 1316 aa9.73□□□□□ -0.85
LSAMP-204ENST00000475403 TTC21AQ8NDW8 1320 aa9.73□□□□□ -0.85
LSAMP-204ENST00000475403 KIF3CO14782 793 aa9.72□□□□□ -0.85
LSAMP-204ENST00000475403 ZNF692Q9BU19 519 aaPredicted RBP9.72□□□□□ -0.85
LSAMP-204ENST00000475403 GTF3C3Q9Y5Q9 886 aa9.72□□□□□ -0.85
LSAMP-204ENST00000475403 DOT1LQ8TEK3 1739 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms