RNA–Protein interactions for RNA: ENST00000475325.1

FRMD4A-205, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 875 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-205ENST00000475325 GCP02774 474 aa12.6□□□□□ -0.39
FRMD4A-205ENST00000475325 HOXC9P31274 260 aa12.6□□□□□ -0.39
FRMD4A-205ENST00000475325 SALL2Q9Y467 1007 aaPredicted RBP12.6□□□□□ -0.39
FRMD4A-205ENST00000475325 FCHSD2O94868 740 aa12.59□□□□□ -0.39
FRMD4A-205ENST00000475325 PDE3BQ13370 1112 aa12.59□□□□□ -0.39
FRMD4A-205ENST00000475325 RGPD5Q99666 1765 aa12.58□□□□□ -0.39
FRMD4A-205ENST00000475325 ARHGEF25Q86VW2 580 aa12.58□□□□□ -0.4
FRMD4A-205ENST00000475325 IP6K1Q92551 441 aa12.58□□□□□ -0.4
FRMD4A-205ENST00000475325 PLEKHF1Q96S99 279 aa12.58□□□□□ -0.4
FRMD4A-205ENST00000475325 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
FRMD4A-205ENST00000475325 MAPK8IP3Q9UPT6 1336 aa12.58□□□□□ -0.4
FRMD4A-205ENST00000475325 ABCC6O95255 1503 aa12.57□□□□□ -0.4
FRMD4A-205ENST00000475325 COL18A1P39060 1754 aa12.57□□□□□ -0.4
FRMD4A-205ENST00000475325 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
FRMD4A-205ENST00000475325 HMOX1P09601 288 aa12.57□□□□□ -0.4
FRMD4A-205ENST00000475325 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
FRMD4A-205ENST00000475325 TCP11L2Q8N4U5 519 aa12.57□□□□□ -0.4
FRMD4A-205ENST00000475325 ZNF521Q96K83 1311 aa12.57□□□□□ -0.4
FRMD4A-205ENST00000475325 PHLPP1O60346 1717 aa12.57□□□□□ -0.4
FRMD4A-205ENST00000475325 RGPD2P0DJD1 1756 aa12.56□□□□□ -0.4
FRMD4A-205ENST00000475325 TOM1O60784 492 aa12.56□□□□□ -0.4
FRMD4A-205ENST00000475325 PRKAR2BP31323 418 aa12.56□□□□□ -0.4
FRMD4A-205ENST00000475325 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
FRMD4A-205ENST00000475325 ZBTB7CA1YPR0 619 aa12.55□□□□□ -0.4
FRMD4A-205ENST00000475325 NEFMP07197 916 aa12.55□□□□□ -0.4
FRMD4A-205ENST00000475325 IGSF1Q8N6C5 1336 aa12.55□□□□□ -0.4
FRMD4A-205ENST00000475325 COL22A1Q8NFW1 1626 aaPredicted RBP12.55□□□□□ -0.4
FRMD4A-205ENST00000475325 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
FRMD4A-205ENST00000475325 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
FRMD4A-205ENST00000475325 CABLES1Q8TDN4 633 aa12.54□□□□□ -0.4
FRMD4A-205ENST00000475325 RRP7AQ9Y3A4 280 aaKnown RBP12.54□□□□□ -0.4
FRMD4A-205ENST00000475325 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
FRMD4A-205ENST00000475325 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
FRMD4A-205ENST00000475325 CAMTA1Q9Y6Y1 1673 aa12.54□□□□□ -0.4
FRMD4A-205ENST00000475325 CPDO75976 1380 aa12.54□□□□□ -0.4
FRMD4A-205ENST00000475325 KDRP35968 1356 aa12.54□□□□□ -0.4
FRMD4A-205ENST00000475325 TMPOP42166 694 aaKnown RBP12.53□□□□□ -0.4
FRMD4A-205ENST00000475325 ZC3H6P61129 1189 aaKnown RBP12.53□□□□□ -0.4
FRMD4A-205ENST00000475325 AEBP1Q8IUX7 1158 aa12.53□□□□□ -0.4
FRMD4A-205ENST00000475325 LTV1Q96GA3 475 aaPredicted RBP12.53□□□□□ -0.4
FRMD4A-205ENST00000475325 EYA1Q99502 592 aa12.53□□□□□ -0.4
FRMD4A-205ENST00000475325 PHF23Q9BUL5 403 aaPredicted RBP12.53□□□□□ -0.4
FRMD4A-205ENST00000475325 GOLGA2Q08379 1002 aa12.52□□□□□ -0.41
FRMD4A-205ENST00000475325 NEUROD2Q15784 382 aa12.52□□□□□ -0.41
FRMD4A-205ENST00000475325 WWC1Q8IX03 1113 aa12.52□□□□□ -0.41
FRMD4A-205ENST00000475325 LRRC59Q96AG4 307 aaKnown RBP12.52□□□□□ -0.41
FRMD4A-205ENST00000475325 UBAP1LF5GYI3 381 aa12.51□□□□□ -0.41
FRMD4A-205ENST00000475325 NFE2L2Q16236 605 aa12.51□□□□□ -0.41
FRMD4A-205ENST00000475325 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
FRMD4A-205ENST00000475325 PHACTR3Q96KR7 559 aa12.51□□□□□ -0.41
FRMD4A-205ENST00000475325 KIAA0232Q92628 1395 aa12.51□□□□□ -0.41
FRMD4A-205ENST00000475325 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
FRMD4A-205ENST00000475325 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
FRMD4A-205ENST00000475325 ANKRD24Q8TF21 1146 aa12.5□□□□□ -0.41
FRMD4A-205ENST00000475325 NCAPD2Q15021 1401 aa12.49□□□□□ -0.41
FRMD4A-205ENST00000475325 RIPK4P57078 832 aa12.49□□□□□ -0.41
FRMD4A-205ENST00000475325 PIP4K2BP78356 416 aa12.49□□□□□ -0.41
FRMD4A-205ENST00000475325 SLFN5Q08AF3 891 aa12.49□□□□□ -0.41
FRMD4A-205ENST00000475325 WDR63Q8IWG1 891 aa12.49□□□□□ -0.41
FRMD4A-205ENST00000475325 CERKQ8TCT0 537 aa12.49□□□□□ -0.41
FRMD4A-205ENST00000475325 AXIN2Q9Y2T1 843 aa12.49□□□□□ -0.41
FRMD4A-205ENST00000475325 ERBB3P21860 1342 aa12.48□□□□□ -0.41
FRMD4A-205ENST00000475325 E9PSI1 815 aa12.48□□□□□ -0.41
FRMD4A-205ENST00000475325 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
FRMD4A-205ENST00000475325 LMOD3Q0VAK6 560 aa12.47□□□□□ -0.41
FRMD4A-205ENST00000475325 CHRNA2Q15822 529 aa12.47□□□□□ -0.41
FRMD4A-205ENST00000475325 NBPF6Q5VWK0 638 aa12.47□□□□□ -0.41
FRMD4A-205ENST00000475325 DUSP27Q5VZP5 1158 aa12.47□□□□□ -0.41
FRMD4A-205ENST00000475325 TRMT2AQ8IZ69 625 aaKnown RBP12.47□□□□□ -0.41
FRMD4A-205ENST00000475325 NBPF4Q96M43 638 aa12.47□□□□□ -0.41
FRMD4A-205ENST00000475325 PRDM11Q9NQV5 511 aa12.47□□□□□ -0.41
FRMD4A-205ENST00000475325 COL14A1Q05707 1796 aaKnown RBP12.46□□□□□ -0.41
FRMD4A-205ENST00000475325 USHBP1Q8N6Y0 703 aa12.46□□□□□ -0.41
FRMD4A-205ENST00000475325 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
FRMD4A-205ENST00000475325 IL16Q14005 1332 aa12.45□□□□□ -0.42
FRMD4A-205ENST00000475325 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
FRMD4A-205ENST00000475325 GAS2L2Q8NHY3 880 aa12.44□□□□□ -0.42
FRMD4A-205ENST00000475325 SUPT16HQ9Y5B9 1047 aaKnown RBP12.44□□□□□ -0.42
FRMD4A-205ENST00000475325 COL5A2P05997 1499 aaPredicted RBP12.44□□□□□ -0.42
FRMD4A-205ENST00000475325 CSB-PGBD3P0DP91 1061 aa12.43□□□□□ -0.42
FRMD4A-205ENST00000475325 MTHFSDQ2M296 383 aaKnown RBP12.43□□□□□ -0.42
FRMD4A-205ENST00000475325 MYH16Q9H6N6 1097 aa12.43□□□□□ -0.42
FRMD4A-205ENST00000475325 NLRP2Q9NX02 1062 aa12.43□□□□□ -0.42
FRMD4A-205ENST00000475325 GTF3C3Q9Y5Q9 886 aa12.43□□□□□ -0.42
FRMD4A-205ENST00000475325 VIRMAQ69YN4 1812 aaKnown RBP12.43□□□□□ -0.42
FRMD4A-205ENST00000475325 PLCH1Q4KWH8 1693 aa12.42□□□□□ -0.42
FRMD4A-205ENST00000475325 LRRC37A3O60309 1634 aa12.42□□□□□ -0.42
FRMD4A-205ENST00000475325 RCAN3Q9UKA8 241 aa12.42□□□□□ -0.42
FRMD4A-205ENST00000475325 WDR17Q8IZU2 1322 aa12.41□□□□□ -0.42
FRMD4A-205ENST00000475325 FAM83GA6ND36 823 aa12.41□□□□□ -0.42
FRMD4A-205ENST00000475325 NEFLP07196 543 aa12.41□□□□□ -0.42
FRMD4A-205ENST00000475325 PARP4Q9UKK3 1724 aaKnown RBP12.41□□□□□ -0.42
FRMD4A-205ENST00000475325 PLEKHG2Q9H7P9 1386 aa12.41□□□□□ -0.42
FRMD4A-205ENST00000475325 PKD1L3Q7Z443 1732 aa12.4□□□□□ -0.42
FRMD4A-205ENST00000475325 HTATSF1O43719 755 aaKnown RBP12.4□□□□□ -0.42
FRMD4A-205ENST00000475325 AMOTQ4VCS5 1084 aa12.4□□□□□ -0.42
FRMD4A-205ENST00000475325 PLEKHO1Q53GL0 409 aaPredicted RBP12.4□□□□□ -0.42
FRMD4A-205ENST00000475325 THUMPD2Q9BTF0 503 aaKnown RBP12.4□□□□□ -0.42
FRMD4A-205ENST00000475325 MAP3K5Q99683 1374 aa12.4□□□□□ -0.42
FRMD4A-205ENST00000475325 RNF123Q5XPI4 1314 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms