RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 PPP1R37O75864 691 aa13.08□□□□□ -0.32
ITGA6-210ENST00000475302 SRPK2P78362 688 aaKnown RBP13.08□□□□□ -0.32
ITGA6-210ENST00000475302 CNGB1Q14028 1251 aaPredicted RBP13.08□□□□□ -0.32
ITGA6-210ENST00000475302 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
ITGA6-210ENST00000475302 BCANQ96GW7 911 aa13.07□□□□□ -0.32
ITGA6-210ENST00000475302 ATP7BP35670 1465 aa13.07□□□□□ -0.32
ITGA6-210ENST00000475302 PRR36Q9H6K5 1346 aa13.07□□□□□ -0.32
ITGA6-210ENST00000475302 CABP1Q9NZU7 370 aa13.06□□□□□ -0.32
ITGA6-210ENST00000475302 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
ITGA6-210ENST00000475302 NSD2O96028 1365 aa13.06□□□□□ -0.32
ITGA6-210ENST00000475302 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
ITGA6-210ENST00000475302 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
ITGA6-210ENST00000475302 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
ITGA6-210ENST00000475302 TMEM92Q6UXU6 159 aa13.04□□□□□ -0.32
ITGA6-210ENST00000475302 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
ITGA6-210ENST00000475302 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
ITGA6-210ENST00000475302 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
ITGA6-210ENST00000475302 KCNA6P17658 529 aa13.03□□□□□ -0.32
ITGA6-210ENST00000475302 CGNL1Q0VF96 1302 aa13.03□□□□□ -0.32
ITGA6-210ENST00000475302 ZBED9Q6R2W3 1325 aa13.03□□□□□ -0.32
ITGA6-210ENST00000475302 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
ITGA6-210ENST00000475302 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
ITGA6-210ENST00000475302 PLEKHG3A1L390 1219 aa13.02□□□□□ -0.33
ITGA6-210ENST00000475302 FYB1O15117 783 aa13.02□□□□□ -0.33
ITGA6-210ENST00000475302 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.33
ITGA6-210ENST00000475302 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.33
ITGA6-210ENST00000475302 PPIP5K1Q6PFW1 1433 aa13.02□□□□□ -0.33
ITGA6-210ENST00000475302 ANKRD26Q9UPS8 1709 aa13.02□□□□□ -0.33
ITGA6-210ENST00000475302 LCE2DQ5TA82 110 aaPredicted RBP13.01□□□□□ -0.33
ITGA6-210ENST00000475302 NCKAP5LQ9HCH0 1330 aa13.01□□□□□ -0.33
ITGA6-210ENST00000475302 NWD1Q149M9 1564 aa13.01□□□□□ -0.33
ITGA6-210ENST00000475302 MON2Q7Z3U7 1717 aa13.01□□□□□ -0.33
ITGA6-210ENST00000475302 AKAP12Q02952 1782 aa13.01□□□□□ -0.33
ITGA6-210ENST00000475302 SSH2Q76I76 1423 aa12.99□□□□□ -0.33
ITGA6-210ENST00000475302 HDGFL2Q7Z4V5 671 aaPredicted RBP12.99□□□□□ -0.33
ITGA6-210ENST00000475302 MORC1Q86VD1 984 aa12.99□□□□□ -0.33
ITGA6-210ENST00000475302 NKTRP30414 1462 aaKnown RBP12.98□□□□□ -0.33
ITGA6-210ENST00000475302 EDC4Q6P2E9 1401 aaKnown RBP12.98□□□□□ -0.33
ITGA6-210ENST00000475302 ADAMTS8Q9UP79 889 aa12.98□□□□□ -0.33
ITGA6-210ENST00000475302 SHPRHQ149N8 1683 aa12.97□□□□□ -0.33
ITGA6-210ENST00000475302 GTF3C3Q9Y5Q9 886 aa12.97□□□□□ -0.33
ITGA6-210ENST00000475302 NRKQ7Z2Y5 1582 aa12.97□□□□□ -0.33
ITGA6-210ENST00000475302 KIF20BQ96Q89 1820 aa12.97□□□□□ -0.33
ITGA6-210ENST00000475302 ANKARQ7Z5J8 1434 aa12.96□□□□□ -0.33
ITGA6-210ENST00000475302 FMN2Q9NZ56 1722 aa12.96□□□□□ -0.33
ITGA6-210ENST00000475302 COL3A1P02461 1466 aaPredicted RBP12.96□□□□□ -0.34
ITGA6-210ENST00000475302 NALCNQ8IZF0 1738 aa12.96□□□□□ -0.34
ITGA6-210ENST00000475302 GTPBP6O43824 516 aaPredicted RBP12.95□□□□□ -0.34
ITGA6-210ENST00000475302 GGNBP2Q9H3C7 697 aa12.95□□□□□ -0.34
ITGA6-210ENST00000475302 LMTK3Q96Q04 1460 aa12.95□□□□□ -0.34
ITGA6-210ENST00000475302 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
ITGA6-210ENST00000475302 MTHFSP49914 203 aa12.94□□□□□ -0.34
ITGA6-210ENST00000475302 ADGRL3Q9HAR2 1447 aa12.94□□□□□ -0.34
ITGA6-210ENST00000475302 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
ITGA6-210ENST00000475302 ACEP12821 1306 aa12.93□□□□□ -0.34
ITGA6-210ENST00000475302 USP6P35125 1406 aa12.93□□□□□ -0.34
ITGA6-210ENST00000475302 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
ITGA6-210ENST00000475302 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
ITGA6-210ENST00000475302 AATKQ6ZMQ8 1374 aa12.92□□□□□ -0.34
ITGA6-210ENST00000475302 TTC21BQ7Z4L5 1316 aa12.91□□□□□ -0.34
ITGA6-210ENST00000475302 ST18O60284 1047 aa12.91□□□□□ -0.34
ITGA6-210ENST00000475302 NME9Q86XW9 330 aa12.91□□□□□ -0.34
ITGA6-210ENST00000475302 STRCP1A6NGW2 1772 aa12.91□□□□□ -0.34
ITGA6-210ENST00000475302 ZNF521Q96K83 1311 aa12.9□□□□□ -0.34
ITGA6-210ENST00000475302 STRCQ7RTU9 1775 aa12.9□□□□□ -0.34
ITGA6-210ENST00000475302 OVOS2A0A0J9YW53 1432 aa12.89□□□□□ -0.35
ITGA6-210ENST00000475302 OVOS2Q6IE36 1432 aa12.89□□□□□ -0.35
ITGA6-210ENST00000475302 SNPHO15079 494 aa12.89□□□□□ -0.35
ITGA6-210ENST00000475302 TNNT2P45379 298 aaPredicted RBP12.89□□□□□ -0.35
ITGA6-210ENST00000475302 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.89□□□□□ -0.35
ITGA6-210ENST00000475302 RYDENQ9NUL5 291 aaKnown RBP12.89□□□□□ -0.35
ITGA6-210ENST00000475302 POLKQ9UBT6 870 aa12.89□□□□□ -0.35
ITGA6-210ENST00000475302 USP31Q70CQ4 1352 aa12.89□□□□□ -0.35
ITGA6-210ENST00000475302 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
ITGA6-210ENST00000475302 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
ITGA6-210ENST00000475302 HSPA2P54652 639 aa12.88□□□□□ -0.35
ITGA6-210ENST00000475302 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
ITGA6-210ENST00000475302 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
ITGA6-210ENST00000475302 USP54Q70EL1 1684 aa12.87□□□□□ -0.35
ITGA6-210ENST00000475302 C2orf72A6NCS6 295 aa12.87□□□□□ -0.35
ITGA6-210ENST00000475302 PDE3BQ13370 1112 aa12.87□□□□□ -0.35
ITGA6-210ENST00000475302 WDR43Q15061 677 aaKnown RBP eCLIP12.87□□□□□ -0.35
ITGA6-210ENST00000475302 KIF3CO14782 793 aa12.86□□□□□ -0.35
ITGA6-210ENST00000475302 FBLN1P23142 703 aa12.86□□□□□ -0.35
ITGA6-210ENST00000475302 RBM33Q96EV2 1170 aaKnown RBP12.86□□□□□ -0.35
ITGA6-210ENST00000475302 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
ITGA6-210ENST00000475302 TTC21AQ8NDW8 1320 aa12.86□□□□□ -0.35
ITGA6-210ENST00000475302 IQSEC2Q5JU85 1478 aa12.85□□□□□ -0.35
ITGA6-210ENST00000475302 MARF1Q9Y4F3 1742 aaKnown RBP12.85□□□□□ -0.35
ITGA6-210ENST00000475302 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
ITGA6-210ENST00000475302 POTEMA6NI47 508 aa12.85□□□□□ -0.35
ITGA6-210ENST00000475302 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
ITGA6-210ENST00000475302 PMFBP1Q8TBY8 1022 aa12.85□□□□□ -0.35
ITGA6-210ENST00000475302 CFAP53Q96M91 514 aa12.85□□□□□ -0.35
ITGA6-210ENST00000475302 RNF123Q5XPI4 1314 aa12.85□□□□□ -0.35
ITGA6-210ENST00000475302 CDK12Q9NYV4 1490 aaPredicted RBP12.84□□□□□ -0.35
ITGA6-210ENST00000475302 MAP2P11137 1827 aaKnown RBP12.83□□□□□ -0.35
ITGA6-210ENST00000475302 PIK3C2AO00443 1686 aa12.83□□□□□ -0.35
ITGA6-210ENST00000475302 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.35
ITGA6-210ENST00000475302 PROSER2Q86WR7 435 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms