RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 STRCP1A6NGW2 1772 aa8.92□□□□□ -0.98
ATG4A-207ENST00000474825 AKAP12Q02952 1782 aa8.92□□□□□ -0.98
ATG4A-207ENST00000474825 AATKQ6ZMQ8 1374 aa8.92□□□□□ -0.98
ATG4A-207ENST00000474825 USP31Q70CQ4 1352 aa8.92□□□□□ -0.98
ATG4A-207ENST00000474825 PNPLA6Q8IY17 1366 aa8.92□□□□□ -0.98
ATG4A-207ENST00000474825 TTC21BQ7Z4L5 1316 aa8.92□□□□□ -0.98
ATG4A-207ENST00000474825 TTC21AQ8NDW8 1320 aa8.92□□□□□ -0.98
ATG4A-207ENST00000474825 PLCG2P16885 1265 aa8.92□□□□□ -0.98
ATG4A-207ENST00000474825 MORC1Q86VD1 984 aa8.92□□□□□ -0.98
ATG4A-207ENST00000474825 NRKQ7Z2Y5 1582 aa8.91□□□□□ -0.98
ATG4A-207ENST00000474825 PIP4K2BP78356 416 aa8.91□□□□□ -0.98
ATG4A-207ENST00000474825 ITSN1Q15811 1721 aa8.91□□□□□ -0.98
ATG4A-207ENST00000474825 LRRC7Q96NW7 1537 aa8.9□□□□□ -0.98
ATG4A-207ENST00000474825 OVOS2A0A0J9YW53 1432 aa8.9□□□□□ -0.98
ATG4A-207ENST00000474825 OVOS2Q6IE36 1432 aa8.9□□□□□ -0.98
ATG4A-207ENST00000474825 SMG6Q86US8 1419 aaKnown RBP8.9□□□□□ -0.98
ATG4A-207ENST00000474825 IRX5P78411 483 aaPredicted RBP8.9□□□□□ -0.98
ATG4A-207ENST00000474825 IFNL1Q8IU54 200 aa8.9□□□□□ -0.98
ATG4A-207ENST00000474825 GGNBP2Q9H3C7 697 aa8.9□□□□□ -0.98
ATG4A-207ENST00000474825 PHF8Q9UPP1 1060 aa8.9□□□□□ -0.98
ATG4A-207ENST00000474825 ANKRD26Q9UPS8 1709 aa8.9□□□□□ -0.98
ATG4A-207ENST00000474825 C1orf167Q5SNV9 1468 aa8.89□□□□□ -0.99
ATG4A-207ENST00000474825 MST1RQ04912 1400 aa8.89□□□□□ -0.99
ATG4A-207ENST00000474825 CENPBP07199 599 aaPredicted RBP8.89□□□□□ -0.99
ATG4A-207ENST00000474825 RBM33Q96EV2 1170 aaKnown RBP8.89□□□□□ -0.99
ATG4A-207ENST00000474825 TMEM106CQ9BVX2 250 aa8.89□□□□□ -0.99
ATG4A-207ENST00000474825 BLMP54132 1417 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-207ENST00000474825 NUTM2FA1L443 756 aa8.88□□□□□ -0.99
ATG4A-207ENST00000474825 SNPHO15079 494 aa8.88□□□□□ -0.99
ATG4A-207ENST00000474825 MTHFSP49914 203 aa8.88□□□□□ -0.99
ATG4A-207ENST00000474825 CNGB1Q14028 1251 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-207ENST00000474825 CADPS2Q86UW7 1296 aa8.88□□□□□ -0.99
ATG4A-207ENST00000474825 NME9Q86XW9 330 aa8.88□□□□□ -0.99
ATG4A-207ENST00000474825 FAM9BQ8IZU0 186 aa8.88□□□□□ -0.99
ATG4A-207ENST00000474825 PMFBP1Q8TBY8 1022 aa8.88□□□□□ -0.99
ATG4A-207ENST00000474825 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.87□□□□□ -0.99
ATG4A-207ENST00000474825 NGDNQ8NEJ9 315 aaKnown RBP8.87□□□□□ -0.99
ATG4A-207ENST00000474825 YTHDC1Q96MU7 727 aaKnown RBP8.87□□□□□ -0.99
ATG4A-207ENST00000474825 POLKQ9UBT6 870 aa8.87□□□□□ -0.99
ATG4A-207ENST00000474825 COL3A1P02461 1466 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-207ENST00000474825 USP54Q70EL1 1684 aa8.87□□□□□ -0.99
ATG4A-207ENST00000474825 KIF20BQ96Q89 1820 aa8.87□□□□□ -0.99
ATG4A-207ENST00000474825 ZBED9Q6R2W3 1325 aa8.86□□□□□ -0.99
ATG4A-207ENST00000474825 ATF3P18847 181 aa8.86□□□□□ -0.99
ATG4A-207ENST00000474825 NUBP1P53384 320 aa8.86□□□□□ -0.99
ATG4A-207ENST00000474825 COG3Q96JB2 828 aa8.86□□□□□ -0.99
ATG4A-207ENST00000474825 ORAI2Q96SN7 254 aa8.86□□□□□ -0.99
ATG4A-207ENST00000474825 ZBTB47Q9UFB7 747 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-207ENST00000474825 ADAMTS8Q9UP79 889 aa8.86□□□□□ -0.99
ATG4A-207ENST00000474825 RGPD8O14715 1765 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-207ENST00000474825 MSH6P52701 1360 aa8.86□□□□□ -0.99
ATG4A-207ENST00000474825 XIRP1Q702N8 1843 aaKnown RBP8.85□□□□□ -0.99
ATG4A-207ENST00000474825 ESCO1Q5FWF5 840 aa8.85□□□□□ -0.99
ATG4A-207ENST00000474825 C14orf37Q86TY3 774 aa8.85□□□□□ -0.99
ATG4A-207ENST00000474825 KIF24Q5T7B8 1368 aa8.85□□□□□ -0.99
ATG4A-207ENST00000474825 KIF1AQ12756 1690 aa8.85□□□□□ -0.99
ATG4A-207ENST00000474825 HSPA1LP34931 641 aa8.84□□□□□ -0.99
ATG4A-207ENST00000474825 HNRNPUQ00839 825 aaKnown RBP eCLIP8.84□□□□□ -0.99
ATG4A-207ENST00000474825 CFAP53Q96M91 514 aa8.84□□□□□ -0.99
ATG4A-207ENST00000474825 CDK12Q9NYV4 1490 aaPredicted RBP8.83□□□□□ -1
ATG4A-207ENST00000474825 PLCD3Q8N3E9 789 aa8.83□□□□□ -1
ATG4A-207ENST00000474825 NGEFQ8N5V2 710 aa8.83□□□□□ -1
ATG4A-207ENST00000474825 OCEL1Q9H607 264 aa8.83□□□□□ -1
ATG4A-207ENST00000474825 PIK3C2AO00443 1686 aa8.83□□□□□ -1
ATG4A-207ENST00000474825 SHPRHQ149N8 1683 aa8.83□□□□□ -1
ATG4A-207ENST00000474825 SBNO1A3KN83 1393 aa8.83□□□□□ -1
ATG4A-207ENST00000474825 TNNT2P45379 298 aaPredicted RBP8.82□□□□□ -1
ATG4A-207ENST00000474825 PSME1Q06323 249 aa8.82□□□□□ -1
ATG4A-207ENST00000474825 WDR43Q15061 677 aaKnown RBP eCLIP8.82□□□□□ -1
ATG4A-207ENST00000474825 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.82□□□□□ -1
ATG4A-207ENST00000474825 USP19O94966 1318 aa8.81□□□□□ -1
ATG4A-207ENST00000474825 TRPM3Q9HCF6 1732 aaPredicted RBP8.81□□□□□ -1
ATG4A-207ENST00000474825 FOXO3O43524 673 aa8.81□□□□□ -1
ATG4A-207ENST00000474825 IL13P35225 146 aa8.81□□□□□ -1
ATG4A-207ENST00000474825 ILDR2Q71H61 639 aa8.81□□□□□ -1
ATG4A-207ENST00000474825 BRINP3Q76B58 766 aa8.81□□□□□ -1
ATG4A-207ENST00000474825 KRT28Q7Z3Y7 464 aa8.81□□□□□ -1
ATG4A-207ENST00000474825 FAM212AQ96EL1 285 aa8.81□□□□□ -1
ATG4A-207ENST00000474825 SLAIN2Q9P270 581 aa8.81□□□□□ -1
ATG4A-207ENST00000474825 NPHP3Q7Z494 1330 aa8.8□□□□□ -1
ATG4A-207ENST00000474825 ZNF521Q96K83 1311 aa8.8□□□□□ -1
ATG4A-207ENST00000474825 SLIT3O75094 1523 aa8.8□□□□□ -1
ATG4A-207ENST00000474825 MARF1Q9Y4F3 1742 aaKnown RBP8.8□□□□□ -1
ATG4A-207ENST00000474825 SOCS7O14512 581 aa8.8□□□□□ -1
ATG4A-207ENST00000474825 DIAPH1O60610 1272 aaKnown RBP8.8□□□□□ -1
ATG4A-207ENST00000474825 FBLN1P23142 703 aa8.8□□□□□ -1
ATG4A-207ENST00000474825 NLRP6P59044 892 aa8.8□□□□□ -1
ATG4A-207ENST00000474825 ABTB2Q8N961 1025 aa8.8□□□□□ -1
ATG4A-207ENST00000474825 PLEKHF1Q96S99 279 aa8.8□□□□□ -1
ATG4A-207ENST00000474825 NUDCQ9Y266 331 aa8.8□□□□□ -1
ATG4A-207ENST00000474825 EMILIN1Q9Y6C2 1016 aa8.8□□□□□ -1
ATG4A-207ENST00000474825 PXDNQ92626 1479 aa8.8□□□□□ -1
ATG4A-207ENST00000474825 SOS2Q07890 1332 aaPredicted RBP8.8□□□□□ -1
ATG4A-207ENST00000474825 PDE3BQ13370 1112 aa8.79□□□□□ -1
ATG4A-207ENST00000474825 KCNH5Q8NCM2 988 aa8.79□□□□□ -1
ATG4A-207ENST00000474825 MARVELD3Q96A59 401 aa8.79□□□□□ -1
ATG4A-207ENST00000474825 NFAT5O94916 1531 aa8.79□□□□□ -1
ATG4A-207ENST00000474825 MAP3K19Q56UN5 1328 aa8.79□□□□□ -1
ATG4A-207ENST00000474825 RTL1A6NKG5 1358 aa8.78□□□□□ -1
ATG4A-207ENST00000474825 FCHSD2O94868 740 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms